RNA–Protein interactions for RNA: ENST00000401884.5

SNED1-204, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 4,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-204ENST00000401884 ZNF415Q09FC8 603 aa13.8□□□□□ -0.2
SNED1-204ENST00000401884 GAGE1Q13065 139 aa13.8□□□□□ -0.2
SNED1-204ENST00000401884 ERG28Q9UKR5 140 aa13.8□□□□□ -0.2
SNED1-204ENST00000401884 BUB3O43684 328 aa13.8□□□□□ -0.2
SNED1-204ENST00000401884 GATA1P15976 413 aaPredicted RBP13.8□□□□□ -0.2
SNED1-204ENST00000401884 TTC32Q5I0X7 151 aa13.8□□□□□ -0.2
SNED1-204ENST00000401884 KLHL30-AS1Q8NEE0 82 aa13.8□□□□□ -0.2
SNED1-204ENST00000401884 SDHAF1A6NFY7 115 aa13.8□□□□□ -0.2
SNED1-204ENST00000401884 CFHR4Q92496 578 aa13.8□□□□□ -0.2
SNED1-204ENST00000401884 TMEM238C9JI98 176 aa13.79□□□□□ -0.2
SNED1-204ENST00000401884 PGPEP1Q9NXJ5 209 aa13.79□□□□□ -0.2
SNED1-204ENST00000401884 KNCNA6PVL3 124 aa13.79□□□□□ -0.2
SNED1-204ENST00000401884 PLEKHB2Q96CS7 222 aa13.79□□□□□ -0.2
SNED1-204ENST00000401884 TRAV12-2A0A075B6T6 113 aa13.78□□□□□ -0.2
SNED1-204ENST00000401884 TRGV4A0A0C4DH28 118 aa13.78□□□□□ -0.2
SNED1-204ENST00000401884 A8MWV9 139 aa13.78□□□□□ -0.2
SNED1-204ENST00000401884 NEGR1Q7Z3B1 354 aa13.78□□□□□ -0.2
SNED1-204ENST00000401884 UBE2E2Q96LR5 201 aa13.78□□□□□ -0.2
SNED1-204ENST00000401884 CST9LQ9H4G1 147 aa13.78□□□□□ -0.2
SNED1-204ENST00000401884 KLK9Q9UKQ9 250 aa13.78□□□□□ -0.2
SNED1-204ENST00000401884 TRGV1A0A0A0MS02 117 aa13.78□□□□□ -0.2
SNED1-204ENST00000401884 IGHV4-39P01824 125 aa13.78□□□□□ -0.2
SNED1-204ENST00000401884 FANCD2OSQ96PS1 177 aa13.78□□□□□ -0.2
SNED1-204ENST00000401884 HIVEP2P31629 2446 aa13.78□□□□□ -0.2
SNED1-204ENST00000401884 TRAV8-2A0A0B4J237 113 aa13.78□□□□□ -0.2
SNED1-204ENST00000401884 F8VRH5 84 aa13.78□□□□□ -0.2
SNED1-204ENST00000401884 HTTP42858 3142 aa13.78□□□□□ -0.2
SNED1-204ENST00000401884 SPRY2O43597 315 aa13.78□□□□□ -0.2
SNED1-204ENST00000401884 IGHV7-4-1A0A0J9YVY3 117 aa13.77□□□□□ -0.2
SNED1-204ENST00000401884 DSCAMO60469 2012 aa13.77□□□□□ -0.21
SNED1-204ENST00000401884 WI2-2373I1.2A0A1W2PRP0 233 aa13.77□□□□□ -0.21
SNED1-204ENST00000401884 IGHV4-61A0A0C4DH41 118 aa13.77□□□□□ -0.21
SNED1-204ENST00000401884 ZFP36P26651 326 aaKnown RBP13.77□□□□□ -0.21
SNED1-204ENST00000401884 FBXL19-AS1Q494R0 122 aa13.77□□□□□ -0.21
SNED1-204ENST00000401884 ATG2AQ2TAZ0 1938 aa13.77□□□□□ -0.21
SNED1-204ENST00000401884 C19orf71A6NCJ1 209 aa13.76□□□□□ -0.21
SNED1-204ENST00000401884 C9orf118A6NHY6 69 aa13.76□□□□□ -0.21
SNED1-204ENST00000401884 LINC00322Q6ZN03 302 aaPredicted RBP13.76□□□□□ -0.21
SNED1-204ENST00000401884 C5orf42Q9H799 3197 aa13.76□□□□□ -0.21
SNED1-204ENST00000401884 RPL36AP83881 106 aaKnown RBP13.76□□□□□ -0.21
SNED1-204ENST00000401884 TRPT1Q86TN4 253 aaKnown RBP13.76□□□□□ -0.21
SNED1-204ENST00000401884 RPL36ALQ969Q0 106 aaKnown RBP13.76□□□□□ -0.21
SNED1-204ENST00000401884 SPXQ9BT56 116 aa13.76□□□□□ -0.21
SNED1-204ENST00000401884 SIGMAR1Q99720 223 aa13.76□□□□□ -0.21
SNED1-204ENST00000401884 RBAKDNA6NC62 111 aa13.76□□□□□ -0.21
SNED1-204ENST00000401884 IGHV3-53P01767 116 aa13.76□□□□□ -0.21
SNED1-204ENST00000401884 LENEPQ9Y5L5 61 aa13.76□□□□□ -0.21
SNED1-204ENST00000401884 IGHV1OR15-1A0A075B7D0 117 aa13.75□□□□□ -0.21
SNED1-204ENST00000401884 PRAC2D3DTV9 90 aa13.75□□□□□ -0.21
SNED1-204ENST00000401884 CDKN1BP46527 198 aa13.75□□□□□ -0.21
SNED1-204ENST00000401884 OCIAD2Q56VL3 154 aa13.75□□□□□ -0.21
SNED1-204ENST00000401884 PHLDA1Q8WV24 401 aaPredicted RBP13.75□□□□□ -0.21
SNED1-204ENST00000401884 A0A1B0GV72 72 aa13.75□□□□□ -0.21
SNED1-204ENST00000401884 RNASE1P07998 156 aaKnown RBP13.75□□□□□ -0.21
SNED1-204ENST00000401884 TCTEX1D4Q5JR98 221 aa13.75□□□□□ -0.21
SNED1-204ENST00000401884 PCP2Q8IVA1 136 aa13.75□□□□□ -0.21
SNED1-204ENST00000401884 SAP30O75446 220 aa13.75□□□□□ -0.21
SNED1-204ENST00000401884 BLCAPP62952 87 aa13.75□□□□□ -0.21
SNED1-204ENST00000401884 RANBP2P49792 3224 aaKnown RBP13.75□□□□□ -0.21
SNED1-204ENST00000401884 GNRH2O43555 120 aa13.74□□□□□ -0.21
SNED1-204ENST00000401884 SP5Q6BEB4 398 aaPredicted RBP13.74□□□□□ -0.21
SNED1-204ENST00000401884 DLX4Q92988 240 aaPredicted RBP13.74□□□□□ -0.21
SNED1-204ENST00000401884 MRPL53Q96EL3 112 aaKnown RBP13.74□□□□□ -0.21
SNED1-204ENST00000401884 PMVKQ15126 192 aa13.74□□□□□ -0.21
SNED1-204ENST00000401884 LINC01545Q5VT33 79 aa13.74□□□□□ -0.21
SNED1-204ENST00000401884 CHCHD5Q9BSY4 110 aa13.74□□□□□ -0.21
SNED1-204ENST00000401884 PAX2Q02962 417 aa13.74□□□□□ -0.21
SNED1-204ENST00000401884 ANKRD39Q53RE8 183 aa13.74□□□□□ -0.21
SNED1-204ENST00000401884 PRADC1Q9BSG0 188 aa13.74□□□□□ -0.21
SNED1-204ENST00000401884 TNRC6AQ8NDV7 1962 aaKnown RBP13.74□□□□□ -0.21
SNED1-204ENST00000401884 NPC2P61916 151 aa13.74□□□□□ -0.21
SNED1-204ENST00000401884 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.73□□□□□ -0.21
SNED1-204ENST00000401884 TRBV7-9A0A0J9YWB2 115 aa13.73□□□□□ -0.21
SNED1-204ENST00000401884 LY6G5BQ8NDX9 201 aa13.73□□□□□ -0.21
SNED1-204ENST00000401884 C1orf159Q96HA4 380 aa13.73□□□□□ -0.21
SNED1-204ENST00000401884 DSCAML1Q8TD84 2053 aa13.73□□□□□ -0.21
SNED1-204ENST00000401884 ADARB2-AS1A8MUL3 147 aa13.73□□□□□ -0.21
SNED1-204ENST00000401884 INSP01308 110 aa13.73□□□□□ -0.21
SNED1-204ENST00000401884 C20orf78Q9BR46 151 aa13.73□□□□□ -0.21
SNED1-204ENST00000401884 HLA-DRB4P13762 266 aa13.72□□□□□ -0.21
SNED1-204ENST00000401884 MLST8Q9BVC4 326 aa13.72□□□□□ -0.21
SNED1-204ENST00000401884 HLA-DRB4X5D2U9 266 aa13.72□□□□□ -0.21
SNED1-204ENST00000401884 XCL2Q9UBD3 114 aa13.72□□□□□ -0.21
SNED1-204ENST00000401884 DEFB125Q8N687 156 aa13.72□□□□□ -0.21
SNED1-204ENST00000401884 A0A1B0GXF2 115 aa13.71□□□□□ -0.21
SNED1-204ENST00000401884 IGHV4-38-2P0DP08 117 aa13.71□□□□□ -0.21
SNED1-204ENST00000401884 HTN3P15516 51 aa13.71□□□□□ -0.21
SNED1-204ENST00000401884 NSUN5P1Q3KNT7 163 aa13.71□□□□□ -0.21
SNED1-204ENST00000401884 TIMM21Q9BVV7 248 aa13.71□□□□□ -0.21
SNED1-204ENST00000401884 H3BUA1 57 aa13.71□□□□□ -0.21
SNED1-204ENST00000401884 M0R2P5 195 aa13.71□□□□□ -0.21
SNED1-204ENST00000401884 IGHV4-59P01825 116 aa13.71□□□□□ -0.21
SNED1-204ENST00000401884 GDF5OSQ5U4N7 250 aa13.71□□□□□ -0.21
SNED1-204ENST00000401884 ADAMTSL5Q6ZMM2 481 aa13.71□□□□□ -0.21
SNED1-204ENST00000401884 MORN3Q6PF18 240 aaPredicted RBP13.71□□□□□ -0.22
SNED1-204ENST00000401884 MBD6Q96DN6 1003 aa13.71□□□□□ -0.22
SNED1-204ENST00000401884 MYMXA0A1B0GTQ4 84 aa13.7□□□□□ -0.22
SNED1-204ENST00000401884 MTURNQ8N3F0 131 aa13.7□□□□□ -0.22
SNED1-204ENST00000401884 A0A087WX48 190 aa13.7□□□□□ -0.22
SNED1-204ENST00000401884 TMEM95Q3KNT9 176 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms