RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

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Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 IGHV3OR16-8A0A075B7F1 116 aa12.19□□□□□ -0.46
CHRFAM7A-203ENST00000401522 CCL25O15444 150 aa12.19□□□□□ -0.46
CHRFAM7A-203ENST00000401522 LINC01559Q495D7 138 aa12.19□□□□□ -0.46
CHRFAM7A-203ENST00000401522 OR8A1Q8NGG7 326 aa12.19□□□□□ -0.46
CHRFAM7A-203ENST00000401522 EEF1AKMT3Q96AZ1 226 aa12.19□□□□□ -0.46
CHRFAM7A-203ENST00000401522 IGHV3-35A0A0C4DH35 117 aa12.18□□□□□ -0.46
CHRFAM7A-203ENST00000401522 MUC21A0A0G2JKD1 596 aa12.18□□□□□ -0.46
CHRFAM7A-203ENST00000401522 MUC21A0A140T8X8 626 aa12.18□□□□□ -0.46
CHRFAM7A-203ENST00000401522 RNASE1P07998 156 aaKnown RBP12.18□□□□□ -0.46
CHRFAM7A-203ENST00000401522 MUC21Q5SSG8 566 aa12.18□□□□□ -0.46
CHRFAM7A-203ENST00000401522 ZNF575Q86XF7 245 aa12.18□□□□□ -0.46
CHRFAM7A-203ENST00000401522 OR1N2Q8NGR9 330 aa12.18□□□□□ -0.46
CHRFAM7A-203ENST00000401522 CCDC140Q96MF4 163 aa12.18□□□□□ -0.46
CHRFAM7A-203ENST00000401522 NIPBLQ6KC79 2804 aaeCLIP12.18□□□□□ -0.46
CHRFAM7A-203ENST00000401522 TRBV7-1A0A0A6YYK4 115 aa12.17□□□□□ -0.46
CHRFAM7A-203ENST00000401522 CLPSL1A2RUU4 121 aa12.17□□□□□ -0.46
CHRFAM7A-203ENST00000401522 NPYP01303 97 aa12.17□□□□□ -0.46
CHRFAM7A-203ENST00000401522 Q6ZVH6 145 aa12.17□□□□□ -0.46
CHRFAM7A-203ENST00000401522 MRPL53Q96EL3 112 aaKnown RBP12.17□□□□□ -0.46
CHRFAM7A-203ENST00000401522 PRAC2D3DTV9 90 aa12.17□□□□□ -0.46
CHRFAM7A-203ENST00000401522 BLCAPP62952 87 aa12.17□□□□□ -0.46
CHRFAM7A-203ENST00000401522 ERCC8Q13216 396 aa12.17□□□□□ -0.46
CHRFAM7A-203ENST00000401522 DEFB125Q8N687 156 aa12.17□□□□□ -0.46
CHRFAM7A-203ENST00000401522 LINC01546A6NGU7 62 aa12.16□□□□□ -0.46
CHRFAM7A-203ENST00000401522 CLEC19AQ6UXS0 136 aa12.16□□□□□ -0.46
CHRFAM7A-203ENST00000401522 RNF185Q96GF1 192 aa12.16□□□□□ -0.46
CHRFAM7A-203ENST00000401522 METTL26Q96S19 204 aa12.16□□□□□ -0.46
CHRFAM7A-203ENST00000401522 ATP6V0BQ99437 205 aa12.16□□□□□ -0.46
CHRFAM7A-203ENST00000401522 MAP1LC3AQ9H492 121 aa12.16□□□□□ -0.46
CHRFAM7A-203ENST00000401522 SMKR1H3BMG3 65 aa12.15□□□□□ -0.46
CHRFAM7A-203ENST00000401522 TAX1BP3O14907 124 aa12.15□□□□□ -0.46
CHRFAM7A-203ENST00000401522 C2orf91Q6ZV80 131 aa12.15□□□□□ -0.46
CHRFAM7A-203ENST00000401522 RNF182Q8N6D2 247 aa12.15□□□□□ -0.46
CHRFAM7A-203ENST00000401522 IFI27L1Q96BM0 104 aa12.15□□□□□ -0.46
CHRFAM7A-203ENST00000401522 G3V318 75 aa12.14□□□□□ -0.47
CHRFAM7A-203ENST00000401522 IGHG2P01859 326 aa12.14□□□□□ -0.47
CHRFAM7A-203ENST00000401522 CACNG7P62955 275 aa12.14□□□□□ -0.47
CHRFAM7A-203ENST00000401522 U3KQE9 123 aa12.14□□□□□ -0.47
CHRFAM7A-203ENST00000401522 ATP5G2Q06055 141 aa12.13□□□□□ -0.47
CHRFAM7A-203ENST00000401522 Q6ZS46 218 aa12.13□□□□□ -0.47
CHRFAM7A-203ENST00000401522 AGPAT4-IT1Q9H0P7 198 aa12.13□□□□□ -0.47
CHRFAM7A-203ENST00000401522 NXT2Q9NPJ8 142 aaKnown RBP12.13□□□□□ -0.47
CHRFAM7A-203ENST00000401522 TRAV8-2A0A0B4J237 113 aa12.13□□□□□ -0.47
CHRFAM7A-203ENST00000401522 IGHV3-66A0A0C4DH42 116 aa12.13□□□□□ -0.47
CHRFAM7A-203ENST00000401522 FGF6P10767 208 aa12.13□□□□□ -0.47
CHRFAM7A-203ENST00000401522 VAMP3Q15836 100 aa12.13□□□□□ -0.47
CHRFAM7A-203ENST00000401522 ANKRD39Q53RE8 183 aa12.13□□□□□ -0.47
CHRFAM7A-203ENST00000401522 TMEM78Q5T7P6 136 aa12.13□□□□□ -0.47
CHRFAM7A-203ENST00000401522 Q8N2B8 174 aa12.13□□□□□ -0.47
CHRFAM7A-203ENST00000401522 MSRB1Q9NZV6 116 aa12.13□□□□□ -0.47
CHRFAM7A-203ENST00000401522 NF1P21359 2839 aa12.12□□□□□ -0.47
CHRFAM7A-203ENST00000401522 LINC01548A6NM66 108 aa12.12□□□□□ -0.47
CHRFAM7A-203ENST00000401522 FAM223BA6NKX1 122 aa12.11□□□□□ -0.47
CHRFAM7A-203ENST00000401522 C9orf47Q6ZRZ4 202 aa12.11□□□□□ -0.47
CHRFAM7A-203ENST00000401522 C8orf86Q6ZUL3 223 aa12.11□□□□□ -0.47
CHRFAM7A-203ENST00000401522 FAM223AQ8IWN6 122 aa12.11□□□□□ -0.47
CHRFAM7A-203ENST00000401522 ZNF702PQ9H963 129 aa12.11□□□□□ -0.47
CHRFAM7A-203ENST00000401522 CBY1Q9Y3M2 126 aa12.11□□□□□ -0.47
CHRFAM7A-203ENST00000401522 TNFRSF6BO95407 300 aa12.11□□□□□ -0.47
CHRFAM7A-203ENST00000401522 IGF1P05019 195 aa12.11□□□□□ -0.47
CHRFAM7A-203ENST00000401522 CRIP2P52943 208 aaPredicted RBP12.11□□□□□ -0.47
CHRFAM7A-203ENST00000401522 SEC11AP67812 179 aa12.11□□□□□ -0.47
CHRFAM7A-203ENST00000401522 PSMG4Q5JS54 123 aa12.11□□□□□ -0.47
CHRFAM7A-203ENST00000401522 BOD1L2Q8IYS8 172 aa12.11□□□□□ -0.47
CHRFAM7A-203ENST00000401522 OR4C5Q8NGB2 326 aa12.11□□□□□ -0.47
CHRFAM7A-203ENST00000401522 TRAV41A0A0B4J266 112 aa12.1□□□□□ -0.47
CHRFAM7A-203ENST00000401522 IGKV3D-20A0A0C4DH25 116 aa12.1□□□□□ -0.47
CHRFAM7A-203ENST00000401522 K7EP13 123 aa12.1□□□□□ -0.47
CHRFAM7A-203ENST00000401522 FCER1GP30273 86 aa12.1□□□□□ -0.47
CHRFAM7A-203ENST00000401522 FXYD7P58549 80 aa12.1□□□□□ -0.47
CHRFAM7A-203ENST00000401522 TMEM97Q5BJF2 176 aa12.1□□□□□ -0.47
CHRFAM7A-203ENST00000401522 C19orf54Q5BKX5 351 aa12.1□□□□□ -0.47
CHRFAM7A-203ENST00000401522 OR9G4Q8NGQ1 327 aa12.1□□□□□ -0.47
CHRFAM7A-203ENST00000401522 ZNF580Q9UK33 172 aa12.1□□□□□ -0.47
CHRFAM7A-203ENST00000401522 SIVA1O15304 175 aa12.09□□□□□ -0.47
CHRFAM7A-203ENST00000401522 Q6ZSV7 163 aa12.09□□□□□ -0.47
CHRFAM7A-203ENST00000401522 SMIM15Q7Z3B0 74 aa12.09□□□□□ -0.47
CHRFAM7A-203ENST00000401522 IGHV3OR16-13A0A075B7E8 117 aa12.09□□□□□ -0.47
CHRFAM7A-203ENST00000401522 IGHV3-74A0A0B4J1X5 117 aa12.09□□□□□ -0.47
CHRFAM7A-203ENST00000401522 LEPP41159 167 aa12.09□□□□□ -0.47
CHRFAM7A-203ENST00000401522 C11orf21Q9P2W6 132 aa12.09□□□□□ -0.47
CHRFAM7A-203ENST00000401522 ZNF207O43670 478 aaKnown RBP12.08□□□□□ -0.48
CHRFAM7A-203ENST00000401522 PPIFP30405 207 aaKnown RBP12.08□□□□□ -0.48
CHRFAM7A-203ENST00000401522 C16orf95Q9H693 158 aa12.08□□□□□ -0.48
CHRFAM7A-203ENST00000401522 IGHV3-49A0A0A0MS15 119 aa12.07□□□□□ -0.48
CHRFAM7A-203ENST00000401522 CBY3A6NI87 242 aa12.07□□□□□ -0.48
CHRFAM7A-203ENST00000401522 SNAI2O43623 268 aa12.07□□□□□ -0.48
CHRFAM7A-203ENST00000401522 Q8N8P6 123 aa12.07□□□□□ -0.48
CHRFAM7A-203ENST00000401522 LENEPQ9Y5L5 61 aa12.07□□□□□ -0.48
CHRFAM7A-203ENST00000401522 IGHV4-4A0A075B6R2 117 aa12.07□□□□□ -0.48
CHRFAM7A-203ENST00000401522 NDUFA7O95182 113 aa12.07□□□□□ -0.48
CHRFAM7A-203ENST00000401522 GLMPQ8WWB7 406 aa12.07□□□□□ -0.48
CHRFAM7A-203ENST00000401522 C16orf92Q96LL3 132 aa12.07□□□□□ -0.48
CHRFAM7A-203ENST00000401522 PEF1Q9UBV8 284 aaKnown RBP12.07□□□□□ -0.48
CHRFAM7A-203ENST00000401522 IGHV7-4-1A0A0J9YVY3 117 aa12.06□□□□□ -0.48
CHRFAM7A-203ENST00000401522 PRSS47A8MTI9 375 aa12.06□□□□□ -0.48
CHRFAM7A-203ENST00000401522 GAS8-AS1O95177 125 aa12.06□□□□□ -0.48
CHRFAM7A-203ENST00000401522 EVI2AP22794 236 aa12.06□□□□□ -0.48
CHRFAM7A-203ENST00000401522 HSD52Q0P140 79 aa12.06□□□□□ -0.48
CHRFAM7A-203ENST00000401522 FOXE3Q13461 319 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms