RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 MUC21A0A0G2JKD1 596 aa8.77□□□□□ -1.01
SKA3-203ENST00000400018 MUC21A0A140T8X8 626 aa8.77□□□□□ -1.01
SKA3-203ENST00000400018 SPINK4O60575 86 aa8.77□□□□□ -1.01
SKA3-203ENST00000400018 MUC21Q5SSG8 566 aa8.77□□□□□ -1.01
SKA3-203ENST00000400018 WDR73Q6P4I2 378 aa8.77□□□□□ -1.01
SKA3-203ENST00000400018 KNCNA6PVL3 124 aa8.76□□□□□ -1.01
SKA3-203ENST00000400018 AMMECR1LQ6DCA0 310 aa8.76□□□□□ -1.01
SKA3-203ENST00000400018 UFC1Q9Y3C8 167 aa8.76□□□□□ -1.01
SKA3-203ENST00000400018 TMSB15BA0A087X1C1 80 aa8.76□□□□□ -1.01
SKA3-203ENST00000400018 IGLV2-11P01706 119 aa8.76□□□□□ -1.01
SKA3-203ENST00000400018 FHL3Q13643 280 aa8.76□□□□□ -1.01
SKA3-203ENST00000400018 KCNIP4Q6PIL6 250 aa8.76□□□□□ -1.01
SKA3-203ENST00000400018 DYNLRB2Q8TF09 96 aa8.76□□□□□ -1.01
SKA3-203ENST00000400018 DCANP1Q8TF63 244 aa8.76□□□□□ -1.01
SKA3-203ENST00000400018 NRN1Q9NPD7 142 aa8.76□□□□□ -1.01
SKA3-203ENST00000400018 IGLV2-8P01709 118 aa8.75□□□□□ -1.01
SKA3-203ENST00000400018 FRMD6-AS1P0C7T7 363 aa8.75□□□□□ -1.01
SKA3-203ENST00000400018 BAGE3Q86Y29 109 aa8.75□□□□□ -1.01
SKA3-203ENST00000400018 BAGE2Q86Y30 109 aa8.75□□□□□ -1.01
SKA3-203ENST00000400018 TCL1AP56279 114 aa8.75□□□□□ -1.01
SKA3-203ENST00000400018 ANAPC16Q96DE5 110 aa8.75□□□□□ -1.01
SKA3-203ENST00000400018 AAMDCQ9H7C9 122 aa8.75□□□□□ -1.01
SKA3-203ENST00000400018 TP73-AS1Q9UF72 201 aa8.75□□□□□ -1.01
SKA3-203ENST00000400018 SOCS3O14543 225 aa8.74□□□□□ -1.01
SKA3-203ENST00000400018 PDE6DO43924 150 aa8.74□□□□□ -1.01
SKA3-203ENST00000400018 CD7P09564 240 aa8.74□□□□□ -1.01
SKA3-203ENST00000400018 CRISP2P16562 243 aa8.74□□□□□ -1.01
SKA3-203ENST00000400018 ZNF80P51504 273 aaPredicted RBP8.74□□□□□ -1.01
SKA3-203ENST00000400018 HIST1H1AQ02539 215 aaPredicted RBP8.74□□□□□ -1.01
SKA3-203ENST00000400018 FOXL1Q12952 345 aa8.74□□□□□ -1.01
SKA3-203ENST00000400018 OTORQ9NRC9 128 aa8.74□□□□□ -1.01
SKA3-203ENST00000400018 MRPS16Q9Y3D3 137 aaKnown RBP8.74□□□□□ -1.01
SKA3-203ENST00000400018 TRAV12-2A0A075B6T6 113 aa8.74□□□□□ -1.01
SKA3-203ENST00000400018 GNG4P50150 75 aa8.74□□□□□ -1.01
SKA3-203ENST00000400018 UBE2G1P62253 170 aa8.74□□□□□ -1.01
SKA3-203ENST00000400018 DEFB114Q30KQ6 69 aa8.74□□□□□ -1.01
SKA3-203ENST00000400018 C3orf56Q8N813 242 aa8.74□□□□□ -1.01
SKA3-203ENST00000400018 C5orf17Q8NAS9 161 aa8.74□□□□□ -1.01
SKA3-203ENST00000400018 CITED1Q99966 193 aa8.74□□□□□ -1.01
SKA3-203ENST00000400018 AGPAT4-IT1Q9H0P7 198 aa8.74□□□□□ -1.01
SKA3-203ENST00000400018 ARL2-SNX15V9GYD0 113 aa8.74□□□□□ -1.01
SKA3-203ENST00000400018 IGLL1P15814 213 aa8.74□□□□□ -1.01
SKA3-203ENST00000400018 DEFB131AP59861 70 aa8.74□□□□□ -1.01
SKA3-203ENST00000400018 OXLD1Q5BKU9 147 aa8.74□□□□□ -1.01
SKA3-203ENST00000400018 PRR9Q5T870 116 aa8.74□□□□□ -1.01
SKA3-203ENST00000400018 SAMD13Q5VXD3 122 aa8.74□□□□□ -1.01
SKA3-203ENST00000400018 RBPMS2Q6ZRY4 209 aaKnown RBP8.74□□□□□ -1.01
SKA3-203ENST00000400018 IGF2BP2-AS1Q96M15 143 aa8.74□□□□□ -1.01
SKA3-203ENST00000400018 TMEM250H0YL14 139 aa8.73□□□□□ -1.01
SKA3-203ENST00000400018 TAX1BP3O14907 124 aa8.73□□□□□ -1.01
SKA3-203ENST00000400018 PRB2P02812 416 aaPredicted RBP8.73□□□□□ -1.01
SKA3-203ENST00000400018 RPS20P60866 119 aaKnown RBP8.73□□□□□ -1.01
SKA3-203ENST00000400018 A0A1W2PS18 150 aa8.73□□□□□ -1.01
SKA3-203ENST00000400018 M0R2Z0 102 aa8.73□□□□□ -1.01
SKA3-203ENST00000400018 PSG8Q9UQ74 426 aa8.73□□□□□ -1.01
SKA3-203ENST00000400018 K7EMT4 169 aa8.72□□□□□ -1.01
SKA3-203ENST00000400018 CRIP1P50238 77 aa8.72□□□□□ -1.01
SKA3-203ENST00000400018 GRAMD2BQ96HH9 432 aa8.72□□□□□ -1.01
SKA3-203ENST00000400018 LGALS9O00182 355 aa8.72□□□□□ -1.01
SKA3-203ENST00000400018 GPX1P07203 203 aa8.72□□□□□ -1.01
SKA3-203ENST00000400018 PMCHP20382 165 aa8.72□□□□□ -1.01
SKA3-203ENST00000400018 PSG3Q16557 428 aa8.72□□□□□ -1.01
SKA3-203ENST00000400018 MPV17L2Q567V2 206 aa8.72□□□□□ -1.01
SKA3-203ENST00000400018 LINC00482Q8N8I6 264 aa8.72□□□□□ -1.01
SKA3-203ENST00000400018 ESDP10768 282 aa8.71□□□□□ -1.01
SKA3-203ENST00000400018 AMTP48728 403 aa8.71□□□□□ -1.01
SKA3-203ENST00000400018 Q86TA4 180 aa8.71□□□□□ -1.01
SKA3-203ENST00000400018 NDUFA11Q86Y39 141 aa8.71□□□□□ -1.01
SKA3-203ENST00000400018 C11orf52Q96A22 123 aa8.71□□□□□ -1.01
SKA3-203ENST00000400018 PEMTQ9UBM1 199 aa8.71□□□□□ -1.02
SKA3-203ENST00000400018 G3V4G9 280 aa8.7□□□□□ -1.02
SKA3-203ENST00000400018 ZNF253O75346 499 aa8.7□□□□□ -1.02
SKA3-203ENST00000400018 HTN1P15515 57 aa8.7□□□□□ -1.02
SKA3-203ENST00000400018 ATP6V0BQ99437 205 aa8.7□□□□□ -1.02
SKA3-203ENST00000400018 K7EQG2 157 aa8.7□□□□□ -1.02
SKA3-203ENST00000400018 C3orf79P0CE67 100 aa8.7□□□□□ -1.02
SKA3-203ENST00000400018 CSN1S1P47710 185 aa8.7□□□□□ -1.02
SKA3-203ENST00000400018 PSG9Q00887 426 aa8.7□□□□□ -1.02
SKA3-203ENST00000400018 FER1L6-AS1Q8NA97 138 aa8.7□□□□□ -1.02
SKA3-203ENST00000400018 TPPP3Q9BW30 176 aa8.7□□□□□ -1.02
SKA3-203ENST00000400018 MRPL18Q9H0U6 180 aaKnown RBP8.7□□□□□ -1.02
SKA3-203ENST00000400018 A0A087X0K7 114 aa8.69□□□□□ -1.02
SKA3-203ENST00000400018 CT45A10P0DMU9 189 aa8.69□□□□□ -1.02
SKA3-203ENST00000400018 SPINK13Q1W4C9 94 aa8.69□□□□□ -1.02
SKA3-203ENST00000400018 TRAV8-6A0A0B4J262 113 aa8.69□□□□□ -1.02
SKA3-203ENST00000400018 ZNF256Q9Y2P7 627 aaPredicted RBP8.69□□□□□ -1.02
SKA3-203ENST00000400018 TIMM8BQ9Y5J9 83 aaPredicted RBP8.69□□□□□ -1.02
SKA3-203ENST00000400018 PDE6HQ13956 83 aa8.68□□□□□ -1.02
SKA3-203ENST00000400018 ODF3L2Q3SX64 289 aa8.68□□□□□ -1.02
SKA3-203ENST00000400018 C12orf54Q6X4T0 127 aa8.68□□□□□ -1.02
SKA3-203ENST00000400018 FAM19A2Q8N3H0 131 aa8.68□□□□□ -1.02
SKA3-203ENST00000400018 C11orf21Q9P2W6 132 aa8.68□□□□□ -1.02
SKA3-203ENST00000400018 A0A1B0GV72 72 aa8.68□□□□□ -1.02
SKA3-203ENST00000400018 KIAA1644Q3SXP7 199 aa8.68□□□□□ -1.02
SKA3-203ENST00000400018 SFRP2Q96HF1 295 aa8.68□□□□□ -1.02
SKA3-203ENST00000400018 RCHY1Q96PM5 261 aa8.68□□□□□ -1.02
SKA3-203ENST00000400018 RBMY1BA6NDE4 496 aaKnown RBP8.67□□□□□ -1.02
SKA3-203ENST00000400018 RBMY1EA6NEQ0 496 aaKnown RBP8.67□□□□□ -1.02
SKA3-203ENST00000400018 NUDT3O95989 172 aa8.67□□□□□ -1.02
SKA3-203ENST00000400018 LTAP01374 205 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 177.5 ms