RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 VAMP2P63027 116 aa11.63□□□□□ -0.55
UFD1-202ENST00000399523 DPPA3Q6W0C5 159 aa11.63□□□□□ -0.55
UFD1-202ENST00000399523 FXYD5Q96DB9 178 aa11.63□□□□□ -0.55
UFD1-202ENST00000399523 PHYHIPLQ96FC7 376 aa11.63□□□□□ -0.55
UFD1-202ENST00000399523 UBE2L5PA0A1B0GUS4 154 aa11.62□□□□□ -0.55
UFD1-202ENST00000399523 C5orf51A6NDU8 294 aa11.62□□□□□ -0.55
UFD1-202ENST00000399523 LINC00694P0DN24 101 aa11.62□□□□□ -0.55
UFD1-202ENST00000399523 BAXQ07812 192 aa11.62□□□□□ -0.55
UFD1-202ENST00000399523 ZNF876PQ49A33 203 aa11.62□□□□□ -0.55
UFD1-202ENST00000399523 PYDC2Q56P42 97 aa11.62□□□□□ -0.55
UFD1-202ENST00000399523 TMED6Q8WW62 240 aa11.62□□□□□ -0.55
UFD1-202ENST00000399523 SLIRPQ9GZT3 109 aaKnown RBP11.62□□□□□ -0.55
UFD1-202ENST00000399523 OR51M1Q9H341 326 aa11.62□□□□□ -0.55
UFD1-202ENST00000399523 IGHV3-73A0A0B4J1V6 119 aa11.61□□□□□ -0.55
UFD1-202ENST00000399523 MGST1P10620 155 aaKnown RBP11.61□□□□□ -0.55
UFD1-202ENST00000399523 BCAP31P51572 246 aa11.61□□□□□ -0.55
UFD1-202ENST00000399523 C14orf177Q52M58 125 aa11.61□□□□□ -0.55
UFD1-202ENST00000399523 MIR17HGQ75NE6 70 aa11.61□□□□□ -0.55
UFD1-202ENST00000399523 ATP5SQ99766 215 aa11.61□□□□□ -0.55
UFD1-202ENST00000399523 C11orf1Q9H5F2 150 aa11.61□□□□□ -0.55
UFD1-202ENST00000399523 A0A087WWC5 75 aa11.6□□□□□ -0.55
UFD1-202ENST00000399523 FAM24AA6NFZ4 105 aa11.6□□□□□ -0.55
UFD1-202ENST00000399523 NDUFB6O95139 128 aa11.6□□□□□ -0.55
UFD1-202ENST00000399523 SEC11BP0C7V7 166 aa11.6□□□□□ -0.55
UFD1-202ENST00000399523 S100A11P31949 105 aa11.6□□□□□ -0.55
UFD1-202ENST00000399523 INPP1P49441 399 aa11.6□□□□□ -0.55
UFD1-202ENST00000399523 ATRAIDQ6UW56 229 aa11.6□□□□□ -0.55
UFD1-202ENST00000399523 SDF2L1Q9HCN8 221 aa11.6□□□□□ -0.55
UFD1-202ENST00000399523 FLVCR2Q9UPI3 526 aa11.6□□□□□ -0.55
UFD1-202ENST00000399523 TRAV21A0A0B4J279 112 aa11.59□□□□□ -0.55
UFD1-202ENST00000399523 DIRC3C9JPN6 131 aa11.59□□□□□ -0.55
UFD1-202ENST00000399523 FGF7P21781 194 aa11.59□□□□□ -0.55
UFD1-202ENST00000399523 RANP62826 216 aaKnown RBP11.59□□□□□ -0.55
UFD1-202ENST00000399523 KCNS1Q96KK3 526 aa11.59□□□□□ -0.55
UFD1-202ENST00000399523 C2orf50Q96LR7 162 aa11.59□□□□□ -0.55
UFD1-202ENST00000399523 NIT1Q86X76 327 aa11.58□□□□□ -0.56
UFD1-202ENST00000399523 CYB561D1Q8N8Q1 229 aa11.58□□□□□ -0.56
UFD1-202ENST00000399523 NPCDR1Q9BY65 106 aa11.58□□□□□ -0.56
UFD1-202ENST00000399523 KLK12Q9UKR0 248 aa11.58□□□□□ -0.56
UFD1-202ENST00000399523 V9GYH0 126 aa11.58□□□□□ -0.56
UFD1-202ENST00000399523 GAGE12JA6NER3 117 aa11.57□□□□□ -0.56
UFD1-202ENST00000399523 SULT1A1P50225 295 aa11.57□□□□□ -0.56
UFD1-202ENST00000399523 GAGE1Q13065 139 aa11.57□□□□□ -0.56
UFD1-202ENST00000399523 GAGE4Q13068 117 aa11.57□□□□□ -0.56
UFD1-202ENST00000399523 GAGE5Q13069 117 aa11.57□□□□□ -0.56
UFD1-202ENST00000399523 GAGE13Q4V321 117 aa11.57□□□□□ -0.56
UFD1-202ENST00000399523 MITD1Q8WV92 249 aa11.57□□□□□ -0.56
UFD1-202ENST00000399523 ASB13Q8WXK3 278 aa11.57□□□□□ -0.56
UFD1-202ENST00000399523 PTH2Q96A98 100 aa11.57□□□□□ -0.56
UFD1-202ENST00000399523 LSM5Q9Y4Y9 91 aaKnown RBP11.57□□□□□ -0.56
UFD1-202ENST00000399523 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.57□□□□□ -0.56
UFD1-202ENST00000399523 URGCP-MRPS24S4R325 110 aa11.57□□□□□ -0.56
UFD1-202ENST00000399523 A0A0D9SG52 128 aa11.56□□□□□ -0.56
UFD1-202ENST00000399523 OR10G9Q8NGN4 311 aa11.56□□□□□ -0.56
UFD1-202ENST00000399523 UBE2WQ96B02 151 aa11.56□□□□□ -0.56
UFD1-202ENST00000399523 HBG1P69891 147 aa11.55□□□□□ -0.56
UFD1-202ENST00000399523 HBG2P69892 147 aa11.55□□□□□ -0.56
UFD1-202ENST00000399523 ATP6V1FQ16864 119 aa11.55□□□□□ -0.56
UFD1-202ENST00000399523 FFAR4Q5NUL3 377 aa11.55□□□□□ -0.56
UFD1-202ENST00000399523 TMEM252Q8N6L7 170 aa11.55□□□□□ -0.56
UFD1-202ENST00000399523 TVP23CQ96ET8 276 aa11.55□□□□□ -0.56
UFD1-202ENST00000399523 C9orf85Q96MD7 179 aa11.55□□□□□ -0.56
UFD1-202ENST00000399523 LYRM2Q9NU23 88 aaPredicted RBP11.55□□□□□ -0.56
UFD1-202ENST00000399523 IGSF23A1L1A6 192 aa11.54□□□□□ -0.56
UFD1-202ENST00000399523 PANO1I0J062 215 aa11.54□□□□□ -0.56
UFD1-202ENST00000399523 GAS8-AS1O95177 125 aa11.54□□□□□ -0.56
UFD1-202ENST00000399523 ZNF506Q5JVG8 444 aa11.54□□□□□ -0.56
UFD1-202ENST00000399523 BCL7BQ9BQE9 202 aa11.54□□□□□ -0.56
UFD1-202ENST00000399523 Q9UF83 564 aa11.54□□□□□ -0.56
UFD1-202ENST00000399523 PGPEP1LA6NFU8 196 aa11.53□□□□□ -0.56
UFD1-202ENST00000399523 F6UZH7 168 aa11.53□□□□□ -0.56
UFD1-202ENST00000399523 Q0VG73 95 aa11.53□□□□□ -0.56
UFD1-202ENST00000399523 ELOBQ15370 118 aa11.53□□□□□ -0.56
UFD1-202ENST00000399523 SPANXN2Q5MJ10 180 aa11.53□□□□□ -0.56
UFD1-202ENST00000399523 DGAT2L7PQ6IED9 249 aa11.53□□□□□ -0.56
UFD1-202ENST00000399523 ZFP2Q6ZN57 461 aa11.53□□□□□ -0.56
UFD1-202ENST00000399523 C9orf163Q8N9P6 203 aa11.53□□□□□ -0.56
UFD1-202ENST00000399523 HSD17B11Q8NBQ5 300 aa11.53□□□□□ -0.56
UFD1-202ENST00000399523 CHCHD7Q9BUK0 85 aa11.53□□□□□ -0.56
UFD1-202ENST00000399523 NAP1L6A6NFF2 107 aa11.52□□□□□ -0.57
UFD1-202ENST00000399523 CCSO14618 274 aa11.52□□□□□ -0.57
UFD1-202ENST00000399523 OR7C2O60412 319 aa11.52□□□□□ -0.57
UFD1-202ENST00000399523 TMBIM6P55061 237 aa11.52□□□□□ -0.57
UFD1-202ENST00000399523 STX12Q86Y82 276 aa11.52□□□□□ -0.57
UFD1-202ENST00000399523 LINC01600Q96MT4 127 aa11.52□□□□□ -0.57
UFD1-202ENST00000399523 TREM1Q9NP99 234 aa11.52□□□□□ -0.57
UFD1-202ENST00000399523 PVALBP20472 110 aaPredicted RBP11.51□□□□□ -0.57
UFD1-202ENST00000399523 FGF8P55075 233 aaPredicted RBP11.51□□□□□ -0.57
UFD1-202ENST00000399523 ODF1Q14990 250 aa11.51□□□□□ -0.57
UFD1-202ENST00000399523 SDIM1Q6ZPB5 146 aa11.51□□□□□ -0.57
UFD1-202ENST00000399523 LINC00479Q96M42 142 aa11.51□□□□□ -0.57
UFD1-202ENST00000399523 SAMD10Q9BYL1 202 aa11.51□□□□□ -0.57
UFD1-202ENST00000399523 PARLQ9H300 379 aa11.51□□□□□ -0.57
UFD1-202ENST00000399523 C11orf21Q9P2W6 132 aa11.51□□□□□ -0.57
UFD1-202ENST00000399523 USP17L23D6RBM5 183 aa11.5□□□□□ -0.57
UFD1-202ENST00000399523 PRSS1P07477 247 aa11.5□□□□□ -0.57
UFD1-202ENST00000399523 UBE2L3P68036 154 aaKnown RBP11.5□□□□□ -0.57
UFD1-202ENST00000399523 HYLS1Q96M11 299 aa11.5□□□□□ -0.57
UFD1-202ENST00000399523 C1orf43Q9BWL3 253 aa11.5□□□□□ -0.57
UFD1-202ENST00000399523 MRPS26Q9BYN8 205 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms