RNA–Protein interactions for RNA: ENST00000399017.6

TTC3-204, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC3, Length 10,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-204ENST00000399017 GFI1BQ5VTD9 330 aa4.02□□□□□ -1.77
TTC3-204ENST00000399017 GFRA4Q9GZZ7 299 aa4.02□□□□□ -1.77
TTC3-204ENST00000399017 TMEM242Q9NWH2 141 aa4.02□□□□□ -1.77
TTC3-204ENST00000399017 A0A0G2JMM0 328 aa4.02□□□□□ -1.77
TTC3-204ENST00000399017 A0A1W2PPB8 328 aa4.02□□□□□ -1.77
TTC3-204ENST00000399017 A0A1W2PRS3 328 aa4.02□□□□□ -1.77
TTC3-204ENST00000399017 KIR3DP1A8MWS1 328 aa4.02□□□□□ -1.77
TTC3-204ENST00000399017 TRBV12-3P01733 135 aa4.02□□□□□ -1.77
TTC3-204ENST00000399017 C1orf229Q6ZS94 237 aaPredicted RBP4.02□□□□□ -1.77
TTC3-204ENST00000399017 C14orf178Q8N769 122 aaPredicted RBP4.02□□□□□ -1.77
TTC3-204ENST00000399017 TCL1BO95988 128 aa4.01□□□□□ -1.77
TTC3-204ENST00000399017 NANOS3P60323 173 aaKnown RBP4.01□□□□□ -1.77
TTC3-204ENST00000399017 PLA2G2CQ5R387 149 aa4.01□□□□□ -1.77
TTC3-204ENST00000399017 MSRB3Q8IXL7 192 aa4.01□□□□□ -1.77
TTC3-204ENST00000399017 CEND1Q8N111 149 aa4.01□□□□□ -1.77
TTC3-204ENST00000399017 SLC25A29Q8N8R3 303 aa4.01□□□□□ -1.77
TTC3-204ENST00000399017 BRK1Q8WUW1 75 aa4.01□□□□□ -1.77
TTC3-204ENST00000399017 TRBV7-3A0A075B6L6 115 aa4.01□□□□□ -1.77
TTC3-204ENST00000399017 RS1O15537 224 aa4.01□□□□□ -1.77
TTC3-204ENST00000399017 COL8A2P25067 703 aa4.01□□□□□ -1.77
TTC3-204ENST00000399017 YPEL3P61236 119 aaPredicted RBP4.01□□□□□ -1.77
TTC3-204ENST00000399017 GAGE2AQ6NT46 116 aa4.01□□□□□ -1.77
TTC3-204ENST00000399017 Q6ZVH6 145 aa4.01□□□□□ -1.77
TTC3-204ENST00000399017 KLHDC2Q9Y2U9 406 aa4.01□□□□□ -1.77
TTC3-204ENST00000399017 A0A087WV48 116 aa4.01□□□□□ -1.77
TTC3-204ENST00000399017 RUSC1-AS1Q66K80 236 aa4.01□□□□□ -1.77
TTC3-204ENST00000399017 C9JAW5 83 aa4.01□□□□□ -1.77
TTC3-204ENST00000399017 SCO2A0A1W2PP80 73 aa4.01□□□□□ -1.77
TTC3-204ENST00000399017 ARMS2P0C7Q2 107 aa4.01□□□□□ -1.77
TTC3-204ENST00000399017 GFI1Q99684 422 aa4.01□□□□□ -1.77
TTC3-204ENST00000399017 KAAG1Q9UBP8 84 aa4.01□□□□□ -1.77
TTC3-204ENST00000399017 IGKV1-16P04430 117 aa4.01□□□□□ -1.77
TTC3-204ENST00000399017 ZNF124Q15973 351 aa4.01□□□□□ -1.77
TTC3-204ENST00000399017 LINC01620Q4KN68 170 aa4.01□□□□□ -1.77
TTC3-204ENST00000399017 ZNF625Q96I27 306 aaPredicted RBP4.01□□□□□ -1.77
TTC3-204ENST00000399017 COL4A4P53420 1690 aaPredicted RBP4.01□□□□□ -1.77
TTC3-204ENST00000399017 IGHV7-4-1A0A0J9YVY3 117 aa4.01□□□□□ -1.77
TTC3-204ENST00000399017 DKK1O94907 266 aa4.01□□□□□ -1.77
TTC3-204ENST00000399017 PDE6GP18545 87 aa4.01□□□□□ -1.77
TTC3-204ENST00000399017 VOPP1Q96AW1 172 aa4.01□□□□□ -1.77
TTC3-204ENST00000399017 SCRT1Q9BWW7 348 aa4.01□□□□□ -1.77
TTC3-204ENST00000399017 TNFRSF12AQ9NP84 129 aa4.01□□□□□ -1.77
TTC3-204ENST00000399017 PCSK5Q92824 1860 aa4.01□□□□□ -1.77
TTC3-204ENST00000399017 FOXG1P55316 489 aaPredicted RBP4.01□□□□□ -1.77
TTC3-204ENST00000399017 DAZAP2Q15038 168 aaPredicted RBP4.01□□□□□ -1.77
TTC3-204ENST00000399017 NMSQ5H8A3 153 aa4.01□□□□□ -1.77
TTC3-204ENST00000399017 ORMDL1Q9P0S3 153 aa4.01□□□□□ -1.77
TTC3-204ENST00000399017 ZNF492Q9P255 531 aa4.01□□□□□ -1.77
TTC3-204ENST00000399017 FAM229AH3BQW9 127 aa4.01□□□□□ -1.77
TTC3-204ENST00000399017 PUSL1Q8N0Z8 303 aaKnown RBP4.01□□□□□ -1.77
TTC3-204ENST00000399017 LYRM9A8MSI8 78 aa4□□□□□ -1.77
TTC3-204ENST00000399017 IGLV2-23P01705 113 aa4□□□□□ -1.77
TTC3-204ENST00000399017 MST1P26927 711 aa4□□□□□ -1.77
TTC3-204ENST00000399017 HSD52Q0P140 79 aa4□□□□□ -1.77
TTC3-204ENST00000399017 LINC00322Q6ZN03 302 aaPredicted RBP4□□□□□ -1.77
TTC3-204ENST00000399017 SRCAPQ6ZRS2 3230 aa4□□□□□ -1.77
TTC3-204ENST00000399017 GREM1O60565 184 aa4□□□□□ -1.77
TTC3-204ENST00000399017 HOXB4P17483 251 aaPredicted RBP4□□□□□ -1.77
TTC3-204ENST00000399017 DEFB112Q30KQ8 113 aa4□□□□□ -1.77
TTC3-204ENST00000399017 AMTNQ6UX39 209 aa4□□□□□ -1.77
TTC3-204ENST00000399017 VSIG2Q96IQ7 327 aa4□□□□□ -1.77
TTC3-204ENST00000399017 MLST8Q9BVC4 326 aa4□□□□□ -1.77
TTC3-204ENST00000399017 CYTL1Q9NRR1 136 aa4□□□□□ -1.77
TTC3-204ENST00000399017 D6R8Y8 96 aa4□□□□□ -1.77
TTC3-204ENST00000399017 TMEM256-PLSCR3K7ERE1 68 aa4□□□□□ -1.77
TTC3-204ENST00000399017 MIR17HGQ75NE6 70 aa4□□□□□ -1.77
TTC3-204ENST00000399017 CCDC140Q96MF4 163 aa4□□□□□ -1.77
TTC3-204ENST00000399017 G3V4G9 280 aa4□□□□□ -1.77
TTC3-204ENST00000399017 CD300CQ08708 224 aa4□□□□□ -1.77
TTC3-204ENST00000399017 EXOC3-AS1Q8N2X6 119 aa4□□□□□ -1.77
TTC3-204ENST00000399017 SIGMAR1Q99720 223 aa4□□□□□ -1.77
TTC3-204ENST00000399017 SMIM27A0A1W2PRY6 76 aa4□□□□□ -1.77
TTC3-204ENST00000399017 FRMD6-AS1P0C7T7 363 aa4□□□□□ -1.77
TTC3-204ENST00000399017 OTX1P32242 354 aaPredicted RBP4□□□□□ -1.77
TTC3-204ENST00000399017 Q6Q795 121 aa4□□□□□ -1.77
TTC3-204ENST00000399017 PIP4P1Q86T03 277 aa4□□□□□ -1.77
TTC3-204ENST00000399017 TMEM263Q8WUH6 116 aaKnown RBP4□□□□□ -1.77
TTC3-204ENST00000399017 A0A087WWL8 130 aa4□□□□□ -1.77
TTC3-204ENST00000399017 MUC21A0A0G2JKD1 596 aa4□□□□□ -1.77
TTC3-204ENST00000399017 MUC21A0A140T8X8 626 aa4□□□□□ -1.77
TTC3-204ENST00000399017 SPRED2Q7Z698 418 aa4□□□□□ -1.77
TTC3-204ENST00000399017 RNASE7Q9H1E1 156 aaKnown RBP4□□□□□ -1.77
TTC3-204ENST00000399017 NCOR1P1Q9H4R4 102 aa4□□□□□ -1.77
TTC3-204ENST00000399017 M0R2N4 97 aa4□□□□□ -1.77
TTC3-204ENST00000399017 NCR2O95944 276 aa4□□□□□ -1.77
TTC3-204ENST00000399017 SRP19P09132 144 aaKnown RBP4□□□□□ -1.77
TTC3-204ENST00000399017 CLPSL2Q6UWE3 100 aa4□□□□□ -1.77
TTC3-204ENST00000399017 AJUBAQ96IF1 538 aa4□□□□□ -1.77
TTC3-204ENST00000399017 PNRC2Q9NPJ4 139 aaKnown RBP4□□□□□ -1.77
TTC3-204ENST00000399017 PIEZO2Q9H5I5 2752 aa4□□□□□ -1.77
TTC3-204ENST00000399017 SPATA12Q7Z6I5 190 aa4□□□□□ -1.77
TTC3-204ENST00000399017 A4D1N5 150 aa3.99□□□□□ -1.77
TTC3-204ENST00000399017 K7EQD1 137 aa3.99□□□□□ -1.77
TTC3-204ENST00000399017 MIFP14174 115 aa3.99□□□□□ -1.77
TTC3-204ENST00000399017 PRO0255Q9UI72 69 aa3.99□□□□□ -1.77
TTC3-204ENST00000399017 USP17L23D6RBM5 183 aa3.99□□□□□ -1.77
TTC3-204ENST00000399017 THSD7BQ9C0I4 1608 aa3.99□□□□□ -1.77
TTC3-204ENST00000399017 A0A0J9YY99 117 aa3.99□□□□□ -1.77
TTC3-204ENST00000399017 CD55P08174 381 aa3.99□□□□□ -1.77
TTC3-204ENST00000399017 LOXL1Q08397 574 aaPredicted RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms