RNA–Protein interactions for RNA: ENST00000397358.7

HMBOX1-203, Transcript of homeobox containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMBOX1, Length 4,082 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-203ENST00000397358 CLPSL1A2RUU4 121 aa10.07□□□□□ -0.8
HMBOX1-203ENST00000397358 ATP5LO75964 103 aa10.07□□□□□ -0.8
HMBOX1-203ENST00000397358 IGKV3-20P01619 116 aa10.07□□□□□ -0.8
HMBOX1-203ENST00000397358 FXYD2P54710 66 aa10.07□□□□□ -0.8
HMBOX1-203ENST00000397358 NOTCH3Q9UM47 2321 aa10.06□□□□□ -0.8
HMBOX1-203ENST00000397358 TRBV7-1A0A0A6YYK4 115 aa10.06□□□□□ -0.8
HMBOX1-203ENST00000397358 TRAV8-2A0A0B4J237 113 aa10.06□□□□□ -0.8
HMBOX1-203ENST00000397358 F5H697 171 aa10.06□□□□□ -0.8
HMBOX1-203ENST00000397358 UCNP55089 124 aa10.06□□□□□ -0.8
HMBOX1-203ENST00000397358 SAMD5Q5TGI4 173 aa10.06□□□□□ -0.8
HMBOX1-203ENST00000397358 HIST1H4GQ99525 98 aa10.06□□□□□ -0.8
HMBOX1-203ENST00000397358 UNQ9165/PRO28630Q6UXU0 137 aa10.06□□□□□ -0.8
HMBOX1-203ENST00000397358 SCGB3A1Q96QR1 104 aa10.06□□□□□ -0.8
HMBOX1-203ENST00000397358 SRSF1Q07955 248 aaKnown RBP eCLIP10.06□□□□□ -0.84e-7■■■■□ 22.6
HMBOX1-203ENST00000397358 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.05□□□□□ -0.8
HMBOX1-203ENST00000397358 NEGR1Q7Z3B1 354 aa10.05□□□□□ -0.8
HMBOX1-203ENST00000397358 HRNRQ86YZ3 2850 aaPredicted RBP10.05□□□□□ -0.8
HMBOX1-203ENST00000397358 ARL6IP6Q8N6S5 226 aa10.04□□□□□ -0.8
HMBOX1-203ENST00000397358 TRBV25-1A0A075B6N4 114 aa10.04□□□□□ -0.8
HMBOX1-203ENST00000397358 GNRH2O43555 120 aa10.04□□□□□ -0.8
HMBOX1-203ENST00000397358 LMO4P61968 165 aa10.04□□□□□ -0.8
HMBOX1-203ENST00000397358 PRR9Q5T870 116 aa10.04□□□□□ -0.8
HMBOX1-203ENST00000397358 ADAMTSL5Q6ZMM2 481 aa10.04□□□□□ -0.8
HMBOX1-203ENST00000397358 C5orf56Q8N8D9 126 aa10.04□□□□□ -0.8
HMBOX1-203ENST00000397358 RPL39LQ96EH5 51 aaKnown RBP10.04□□□□□ -0.8
HMBOX1-203ENST00000397358 C20orf173Q96LM9 149 aa10.04□□□□□ -0.8
HMBOX1-203ENST00000397358 MOB4Q9Y3A3 225 aa10.04□□□□□ -0.8
HMBOX1-203ENST00000397358 ASIPP42127 132 aa10.03□□□□□ -0.8
HMBOX1-203ENST00000397358 EMP1P54849 157 aa10.03□□□□□ -0.8
HMBOX1-203ENST00000397358 SFTA2Q6UW10 78 aa10.03□□□□□ -0.8
HMBOX1-203ENST00000397358 DPF1Q92782 380 aa10.03□□□□□ -0.8
HMBOX1-203ENST00000397358 CACNA1AO00555 2505 aa10.03□□□□□ -0.8
HMBOX1-203ENST00000397358 H3BUX3 64 aa10.03□□□□□ -0.8
HMBOX1-203ENST00000397358 ANXA2RQ3ZCQ2 193 aa10.03□□□□□ -0.8
HMBOX1-203ENST00000397358 MTURNQ8N3F0 131 aa10.03□□□□□ -0.8
HMBOX1-203ENST00000397358 USP9YO00507 2555 aaPredicted RBP10.03□□□□□ -0.8
HMBOX1-203ENST00000397358 A0A1W2PPM0 123 aa10.02□□□□□ -0.8
HMBOX1-203ENST00000397358 RBAKDNA6NC62 111 aa10.02□□□□□ -0.8
HMBOX1-203ENST00000397358 K7EP34 96 aa10.02□□□□□ -0.8
HMBOX1-203ENST00000397358 FAM208BQ5VWN6 2430 aa10.02□□□□□ -0.8
HMBOX1-203ENST00000397358 ZNF575Q86XF7 245 aa10.02□□□□□ -0.81
HMBOX1-203ENST00000397358 TRAV21A0A0B4J279 112 aa10.02□□□□□ -0.81
HMBOX1-203ENST00000397358 C19orf84I3L1E1 186 aa10.02□□□□□ -0.81
HMBOX1-203ENST00000397358 GNLYP22749 145 aa10.02□□□□□ -0.81
HMBOX1-203ENST00000397358 FAM74A4Q5TZK3 123 aa10.02□□□□□ -0.81
HMBOX1-203ENST00000397358 SCGB1D4Q6XE38 83 aa10.02□□□□□ -0.81
HMBOX1-203ENST00000397358 HHLA3Q9XRX5 114 aa10.02□□□□□ -0.81
HMBOX1-203ENST00000397358 IGHV7-4-1A0A0J9YVY3 117 aa10.01□□□□□ -0.81
HMBOX1-203ENST00000397358 SIVA1O15304 175 aa10.01□□□□□ -0.81
HMBOX1-203ENST00000397358 BLCAPP62952 87 aa10.01□□□□□ -0.81
HMBOX1-203ENST00000397358 COX8CQ7Z4L0 72 aa10.01□□□□□ -0.81
HMBOX1-203ENST00000397358 MAPKAPK5-AS1Q8N8E1 139 aa10.01□□□□□ -0.81
HMBOX1-203ENST00000397358 OR11H12B2RN74 326 aa10.01□□□□□ -0.81
HMBOX1-203ENST00000397358 C9orf139Q6ZV77 190 aa10.01□□□□□ -0.81
HMBOX1-203ENST00000397358 OR11H1Q8NG94 326 aa10.01□□□□□ -0.81
HMBOX1-203ENST00000397358 OR11H2Q8NH07 326 aa10.01□□□□□ -0.81
HMBOX1-203ENST00000397358 CHTOPQ9Y3Y2 248 aaKnown RBP10.01□□□□□ -0.81
HMBOX1-203ENST00000397358 ACACBO00763 2458 aa10.01□□□□□ -0.81
HMBOX1-203ENST00000397358 NPFFR1Q9GZQ6 430 aa10.01□□□□□ -0.81
HMBOX1-203ENST00000397358 CYSLTR1Q9Y271 337 aa10.01□□□□□ -0.81
HMBOX1-203ENST00000397358 IGHV4-38-2P0DP08 117 aa10□□□□□ -0.81
HMBOX1-203ENST00000397358 HTN1P15515 57 aa10□□□□□ -0.81
HMBOX1-203ENST00000397358 SMIM2Q9BVW6 85 aa10□□□□□ -0.81
HMBOX1-203ENST00000397358 RHPN1-AS1Q9BWJ2 59 aa10□□□□□ -0.81
HMBOX1-203ENST00000397358 SMPXQ9UHP9 88 aa10□□□□□ -0.81
HMBOX1-203ENST00000397358 AGRNO00468 2067 aa10□□□□□ -0.81
HMBOX1-203ENST00000397358 SUMO2P61956 95 aaKnown RBP10□□□□□ -0.81
HMBOX1-203ENST00000397358 C9orf47Q6ZRZ4 202 aa10□□□□□ -0.81
HMBOX1-203ENST00000397358 CNFNQ9BYD5 112 aa10□□□□□ -0.81
HMBOX1-203ENST00000397358 NRACQ8N912 160 aa9.99□□□□□ -0.81
HMBOX1-203ENST00000397358 A0A087WWL8 130 aa9.99□□□□□ -0.81
HMBOX1-203ENST00000397358 IGHV1-69DA0A0B4J2H0 117 aa9.99□□□□□ -0.81
HMBOX1-203ENST00000397358 IGHV1-69P01742 117 aa9.99□□□□□ -0.81
HMBOX1-203ENST00000397358 SRSF9Q13242 221 aaKnown RBP eCLIP9.99□□□□□ -0.81
HMBOX1-203ENST00000397358 AJUBAQ96IF1 538 aa9.99□□□□□ -0.81
HMBOX1-203ENST00000397358 LINC00477Q96M19 166 aa9.99□□□□□ -0.81
HMBOX1-203ENST00000397358 IGHV4-61A0A0C4DH41 118 aa9.99□□□□□ -0.81
HMBOX1-203ENST00000397358 SRSF2Q01130 221 aaKnown RBP9.99□□□□□ -0.81
HMBOX1-203ENST00000397358 CD300EQ496F6 205 aaPredicted RBP9.99□□□□□ -0.81
HMBOX1-203ENST00000397358 AMTNQ6UX39 209 aa9.99□□□□□ -0.81
HMBOX1-203ENST00000397358 A0A087WX48 190 aa9.98□□□□□ -0.81
HMBOX1-203ENST00000397358 IGHV4-39P01824 125 aa9.98□□□□□ -0.81
HMBOX1-203ENST00000397358 ATP5J2P56134 94 aa9.98□□□□□ -0.81
HMBOX1-203ENST00000397358 CSTL1Q9H114 145 aa9.98□□□□□ -0.81
HMBOX1-203ENST00000397358 DPH3P1Q9H4G8 78 aa9.98□□□□□ -0.81
HMBOX1-203ENST00000397358 TMEM95Q3KNT9 176 aa9.98□□□□□ -0.81
HMBOX1-203ENST00000397358 H7C1H1 209 aa9.98□□□□□ -0.81
HMBOX1-203ENST00000397358 FAM159AQ6UWV7 190 aa9.98□□□□□ -0.81
HMBOX1-203ENST00000397358 C2orf66Q6UXQ4 117 aa9.98□□□□□ -0.81
HMBOX1-203ENST00000397358 CEND1Q8N111 149 aa9.98□□□□□ -0.81
HMBOX1-203ENST00000397358 TRAV12-3A0A0B4J271 114 aa9.97□□□□□ -0.81
HMBOX1-203ENST00000397358 OVOL1O14753 267 aa9.97□□□□□ -0.81
HMBOX1-203ENST00000397358 Q6ZS46 218 aa9.97□□□□□ -0.81
HMBOX1-203ENST00000397358 FAM223BA6NKX1 122 aa9.97□□□□□ -0.81
HMBOX1-203ENST00000397358 CD7P09564 240 aa9.97□□□□□ -0.81
HMBOX1-203ENST00000397358 FAM223AQ8IWN6 122 aa9.97□□□□□ -0.81
HMBOX1-203ENST00000397358 ZNF479Q96JC4 524 aa9.97□□□□□ -0.81
HMBOX1-203ENST00000397358 PIMREGQ9BSJ6 248 aa9.97□□□□□ -0.81
HMBOX1-203ENST00000397358 JPT2Q9H910 190 aa9.97□□□□□ -0.81
HMBOX1-203ENST00000397358 ORMDL2Q53FV1 153 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms