RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 TMEM14BQ9NUH8 114 aa9.78□□□□□ -0.84
SMU1-201ENST00000397149 IGLL1P15814 213 aa9.78□□□□□ -0.84
SMU1-201ENST00000397149 WFDC10BQ8IUB3 73 aa9.78□□□□□ -0.84
SMU1-201ENST00000397149 FAM231DQ6ZW35 169 aa9.78□□□□□ -0.84
SMU1-201ENST00000397149 ATAD5Q96QE3 1844 aa9.78□□□□□ -0.84
SMU1-201ENST00000397149 SLURP1P55000 103 aa9.78□□□□□ -0.84
SMU1-201ENST00000397149 PRR25Q96S07 402 aa9.78□□□□□ -0.84
SMU1-201ENST00000397149 IGLC7A0M8Q6 106 aa9.77□□□□□ -0.84
SMU1-201ENST00000397149 NDUFA4O00483 81 aa9.77□□□□□ -0.84
SMU1-201ENST00000397149 HOXB4P17483 251 aaPredicted RBP9.77□□□□□ -0.84
SMU1-201ENST00000397149 GATA3P23771 443 aa9.77□□□□□ -0.85
SMU1-201ENST00000397149 DUX4L9Q6RFH8 374 aaPredicted RBP9.77□□□□□ -0.85
SMU1-201ENST00000397149 TRAV23DV6A0A075B6W5 121 aa9.77□□□□□ -0.85
SMU1-201ENST00000397149 NDUFS7O75251 213 aa9.77□□□□□ -0.85
SMU1-201ENST00000397149 CYTL1Q9NRR1 136 aa9.77□□□□□ -0.85
SMU1-201ENST00000397149 THADAQ6YHU6 1953 aa9.77□□□□□ -0.85
SMU1-201ENST00000397149 A0A1B0GW64 132 aa9.77□□□□□ -0.85
SMU1-201ENST00000397149 ZC2HC1AQ96GY0 325 aa9.77□□□□□ -0.85
SMU1-201ENST00000397149 PLXNB2O15031 1838 aa9.77□□□□□ -0.85
SMU1-201ENST00000397149 HRCT1Q6UXD1 115 aa9.77□□□□□ -0.85
SMU1-201ENST00000397149 Q6ZVH6 145 aa9.77□□□□□ -0.85
SMU1-201ENST00000397149 RNF144BQ7Z419 303 aa9.77□□□□□ -0.85
SMU1-201ENST00000397149 PHF3Q92576 2039 aaKnown RBP9.77□□□□□ -0.85
SMU1-201ENST00000397149 KLK5Q9Y337 293 aaPredicted RBP9.77□□□□□ -0.85
SMU1-201ENST00000397149 LY96Q9Y6Y9 160 aa9.76□□□□□ -0.85
SMU1-201ENST00000397149 TEX49A0A1B0GTD5 131 aa9.76□□□□□ -0.85
SMU1-201ENST00000397149 TAX1BP3O14907 124 aa9.76□□□□□ -0.85
SMU1-201ENST00000397149 SCXQ7RTU7 201 aa9.76□□□□□ -0.85
SMU1-201ENST00000397149 USF3Q68DE3 2245 aa9.76□□□□□ -0.85
SMU1-201ENST00000397149 RGPD4Q7Z3J3 1758 aa9.76□□□□□ -0.85
SMU1-201ENST00000397149 IGHV7-4-1A0A0J9YVY3 117 aa9.76□□□□□ -0.85
SMU1-201ENST00000397149 LECT2O14960 151 aa9.76□□□□□ -0.85
SMU1-201ENST00000397149 CD59P13987 128 aa9.76□□□□□ -0.85
SMU1-201ENST00000397149 KLK12Q9UKR0 248 aa9.76□□□□□ -0.85
SMU1-201ENST00000397149 ATOX1O00244 68 aa9.76□□□□□ -0.85
SMU1-201ENST00000397149 NDUFA1O15239 70 aa9.76□□□□□ -0.85
SMU1-201ENST00000397149 CRYGBP07316 175 aa9.76□□□□□ -0.85
SMU1-201ENST00000397149 FOXI1Q12951 378 aa9.76□□□□□ -0.85
SMU1-201ENST00000397149 SPINK6Q6UWN8 80 aa9.76□□□□□ -0.85
SMU1-201ENST00000397149 J3KT08 172 aa9.76□□□□□ -0.85
SMU1-201ENST00000397149 WISP1O95388 367 aa9.76□□□□□ -0.85
SMU1-201ENST00000397149 IFI6P09912 130 aa9.76□□□□□ -0.85
SMU1-201ENST00000397149 CRYGSP22914 178 aa9.76□□□□□ -0.85
SMU1-201ENST00000397149 TPSG1Q9NRR2 321 aa9.75□□□□□ -0.85
SMU1-201ENST00000397149 IGHV2-70DA0A0C4DH43 119 aa9.75□□□□□ -0.85
SMU1-201ENST00000397149 C9orf66Q5T8R8 295 aa9.75□□□□□ -0.85
SMU1-201ENST00000397149 LAMB2P55268 1798 aa9.75□□□□□ -0.85
SMU1-201ENST00000397149 Q6P435 159 aa9.75□□□□□ -0.85
SMU1-201ENST00000397149 ZNF491Q8N8L2 437 aa9.75□□□□□ -0.85
SMU1-201ENST00000397149 LYPD6BQ8NI32 183 aa9.75□□□□□ -0.85
SMU1-201ENST00000397149 PRR15LQ9BU68 103 aa9.75□□□□□ -0.85
SMU1-201ENST00000397149 TRBV10-2A0A0K0K1G8 114 aa9.75□□□□□ -0.85
SMU1-201ENST00000397149 ATP5G1P05496 136 aa9.75□□□□□ -0.85
SMU1-201ENST00000397149 GATA1P15976 413 aaPredicted RBP9.75□□□□□ -0.85
SMU1-201ENST00000397149 LGALS9BQ3B8N2 356 aa9.75□□□□□ -0.85
SMU1-201ENST00000397149 LGALS9CQ6DKI2 356 aa9.75□□□□□ -0.85
SMU1-201ENST00000397149 RPL39LQ96EH5 51 aaKnown RBP9.75□□□□□ -0.85
SMU1-201ENST00000397149 GVINP1Q7Z2Y8 2422 aa9.74□□□□□ -0.85
SMU1-201ENST00000397149 KMT2EQ8IZD2 1858 aa9.74□□□□□ -0.85
SMU1-201ENST00000397149 TRAV1-1A0A0B4J248 108 aa9.74□□□□□ -0.85
SMU1-201ENST00000397149 DIRC1Q969H9 104 aa9.74□□□□□ -0.85
SMU1-201ENST00000397149 LINC00114Q6XXX2 140 aa9.74□□□□□ -0.85
SMU1-201ENST00000397149 PCP2Q8IVA1 136 aa9.74□□□□□ -0.85
SMU1-201ENST00000397149 REG4Q9BYZ8 158 aa9.74□□□□□ -0.85
SMU1-201ENST00000397149 UBE2D4Q9Y2X8 147 aa9.74□□□□□ -0.85
SMU1-201ENST00000397149 DLEC1Q9Y238 1755 aa9.74□□□□□ -0.85
SMU1-201ENST00000397149 MST1P26927 711 aa9.74□□□□□ -0.85
SMU1-201ENST00000397149 Q6ZRM9 215 aa9.74□□□□□ -0.85
SMU1-201ENST00000397149 A0A087WZ39 114 aa9.74□□□□□ -0.85
SMU1-201ENST00000397149 CFPP27918 469 aa9.74□□□□□ -0.85
SMU1-201ENST00000397149 CLEC2BQ92478 149 aa9.73□□□□□ -0.85
SMU1-201ENST00000397149 K7EQD1 137 aa9.73□□□□□ -0.85
SMU1-201ENST00000397149 VOPP1Q96AW1 172 aa9.73□□□□□ -0.85
SMU1-201ENST00000397149 ZNF492Q9P255 531 aa9.73□□□□□ -0.85
SMU1-201ENST00000397149 Q6ZWC4 215 aa9.73□□□□□ -0.85
SMU1-201ENST00000397149 ARFGEF1Q9Y6D6 1849 aa9.73□□□□□ -0.85
SMU1-201ENST00000397149 DEFB135Q30KP9 77 aa9.73□□□□□ -0.85
SMU1-201ENST00000397149 WI2-2373I1.2A0A1W2PRP0 233 aa9.73□□□□□ -0.85
SMU1-201ENST00000397149 YPEL3P61236 119 aaPredicted RBP9.73□□□□□ -0.85
SMU1-201ENST00000397149 DEFB112Q30KQ8 113 aa9.73□□□□□ -0.85
SMU1-201ENST00000397149 FNDC10F2Z333 226 aa9.72□□□□□ -0.85
SMU1-201ENST00000397149 IGHV4-38-2P0DP08 117 aa9.72□□□□□ -0.85
SMU1-201ENST00000397149 Q0VG73 95 aa9.72□□□□□ -0.85
SMU1-201ENST00000397149 USP54Q70EL1 1684 aa9.72□□□□□ -0.85
SMU1-201ENST00000397149 PDCD11Q14690 1871 aaKnown RBP9.72□□□□□ -0.85
SMU1-201ENST00000397149 COL11A1P12107 1806 aaPredicted RBP9.72□□□□□ -0.85
SMU1-201ENST00000397149 IGHV4-61A0A0C4DH41 118 aa9.72□□□□□ -0.85
SMU1-201ENST00000397149 A4D1N5 150 aa9.72□□□□□ -0.85
SMU1-201ENST00000397149 TMEM190Q8WZ59 177 aa9.72□□□□□ -0.85
SMU1-201ENST00000397149 FOXI2Q6ZQN5 318 aa9.72□□□□□ -0.85
SMU1-201ENST00000397149 HHLA3Q9XRX5 114 aa9.72□□□□□ -0.85
SMU1-201ENST00000397149 SERP1Q9Y6X1 66 aa9.72□□□□□ -0.85
SMU1-201ENST00000397149 LRP5O75197 1615 aa9.71□□□□□ -0.85
SMU1-201ENST00000397149 SHANK3Q9BYB0 1731 aa9.71□□□□□ -0.85
SMU1-201ENST00000397149 TRAV26-1A0A087WT03 109 aa9.71□□□□□ -0.86
SMU1-201ENST00000397149 SPAG11BQ08648 103 aa9.71□□□□□ -0.86
SMU1-201ENST00000397149 SPTAN1Q13813 2472 aaKnown RBP9.71□□□□□ -0.86
SMU1-201ENST00000397149 GBF1Q92538 1859 aa9.71□□□□□ -0.86
SMU1-201ENST00000397149 IGKV1D-37A0A075B6S9 117 aa9.71□□□□□ -0.86
SMU1-201ENST00000397149 LTBP4Q8N2S1 1624 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms