RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 LINC00311Q8N616 119 aa13.67□□□□□ -0.22
MCF2L-208ENST00000397030 ANK1P16157 1881 aa13.67□□□□□ -0.22
MCF2L-208ENST00000397030 DOCK7Q96N67 2140 aa13.67□□□□□ -0.22
MCF2L-208ENST00000397030 Q9H8V8 135 aa13.67□□□□□ -0.22
MCF2L-208ENST00000397030 UBE2CO00762 179 aa13.67□□□□□ -0.22
MCF2L-208ENST00000397030 HIST3H2BBQ8N257 126 aa13.67□□□□□ -0.22
MCF2L-208ENST00000397030 ZNF492Q9P255 531 aa13.67□□□□□ -0.22
MCF2L-208ENST00000397030 WIPF3A6NGB9 483 aa13.67□□□□□ -0.22
MCF2L-208ENST00000397030 DNAJC9-AS1A6NH13 148 aa13.66□□□□□ -0.22
MCF2L-208ENST00000397030 C11orf45Q8TAV5 145 aa13.66□□□□□ -0.22
MCF2L-208ENST00000397030 DEFB125Q8N687 156 aa13.66□□□□□ -0.22
MCF2L-208ENST00000397030 EP300Q09472 2414 aaPredicted RBP13.66□□□□□ -0.22
MCF2L-208ENST00000397030 TRAV1-1A0A0B4J248 108 aa13.66□□□□□ -0.22
MCF2L-208ENST00000397030 C15orf65H3BRN8 121 aa13.66□□□□□ -0.22
MCF2L-208ENST00000397030 SLC25A29Q8N8R3 303 aa13.66□□□□□ -0.22
MCF2L-208ENST00000397030 FAM110AQ9BQ89 295 aa13.65□□□□□ -0.22
MCF2L-208ENST00000397030 SRSF2Q01130 221 aaKnown RBP13.65□□□□□ -0.22
MCF2L-208ENST00000397030 RITA1Q96K30 269 aa13.65□□□□□ -0.22
MCF2L-208ENST00000397030 GTSF1LQ9H1H1 148 aa13.65□□□□□ -0.22
MCF2L-208ENST00000397030 ZNF124Q15973 351 aa13.65□□□□□ -0.22
MCF2L-208ENST00000397030 BAALCQ8WXS3 180 aa13.65□□□□□ -0.22
MCF2L-208ENST00000397030 TP53BP1Q12888 1972 aaPredicted RBP13.65□□□□□ -0.23
MCF2L-208ENST00000397030 FNDC1Q4ZHG4 1894 aaPredicted RBP13.65□□□□□ -0.23
MCF2L-208ENST00000397030 NPYP01303 97 aa13.64□□□□□ -0.23
MCF2L-208ENST00000397030 KLK12Q9UKR0 248 aa13.64□□□□□ -0.23
MCF2L-208ENST00000397030 Q6ZWC4 215 aa13.64□□□□□ -0.23
MCF2L-208ENST00000397030 IGLC1P0CG04 106 aa13.63□□□□□ -0.23
MCF2L-208ENST00000397030 MYCNOSP40205 109 aa13.63□□□□□ -0.23
MCF2L-208ENST00000397030 C4orf3Q8WVX3 66 aa13.63□□□□□ -0.23
MCF2L-208ENST00000397030 FRMPD3Q5JV73 1810 aa13.63□□□□□ -0.23
MCF2L-208ENST00000397030 Q6ZS49 121 aa13.63□□□□□ -0.23
MCF2L-208ENST00000397030 CARD19Q96LW7 228 aa13.63□□□□□ -0.23
MCF2L-208ENST00000397030 NDUFB1O75438 58 aa13.63□□□□□ -0.23
MCF2L-208ENST00000397030 COX7B2Q8TF08 81 aa13.63□□□□□ -0.23
MCF2L-208ENST00000397030 TMEM14CQ9P0S9 112 aa13.62□□□□□ -0.23
MCF2L-208ENST00000397030 TRBV24-1A0A075B6N3 115 aa13.62□□□□□ -0.23
MCF2L-208ENST00000397030 M0R2N4 97 aa13.62□□□□□ -0.23
MCF2L-208ENST00000397030 MAJINQ3KP22 176 aa13.62□□□□□ -0.23
MCF2L-208ENST00000397030 MRPL35Q9NZE8 188 aaKnown RBP13.61□□□□□ -0.23
MCF2L-208ENST00000397030 PHF3Q92576 2039 aaKnown RBP13.61□□□□□ -0.23
MCF2L-208ENST00000397030 GREB1LQ9C091 1923 aaPredicted RBP13.61□□□□□ -0.23
MCF2L-208ENST00000397030 GBF1Q92538 1859 aa13.61□□□□□ -0.23
MCF2L-208ENST00000397030 FUSP35637 526 aaKnown RBP eCLIP13.61□□□□□ -0.239e-6■■■□□ 18.4
MCF2L-208ENST00000397030 SH2D6Q7Z4S9 175 aa13.61□□□□□ -0.23
MCF2L-208ENST00000397030 ZNF491Q8N8L2 437 aa13.61□□□□□ -0.23
MCF2L-208ENST00000397030 FAM186AA6NE01 2351 aa13.61□□□□□ -0.23
MCF2L-208ENST00000397030 MED12Q93074 2177 aa13.6□□□□□ -0.23
MCF2L-208ENST00000397030 J3QQQ9 107 aa13.6□□□□□ -0.23
MCF2L-208ENST00000397030 DIDO1Q9BTC0 2240 aaKnown RBP13.6□□□□□ -0.23
MCF2L-208ENST00000397030 C2orf70A6NJV1 201 aa13.6□□□□□ -0.23
MCF2L-208ENST00000397030 HIST2H2BDQ6DRA6 164 aa13.6□□□□□ -0.23
MCF2L-208ENST00000397030 MGAMO43451 1857 aa13.6□□□□□ -0.23
MCF2L-208ENST00000397030 C14orf132Q9NPU4 83 aa13.59□□□□□ -0.23
MCF2L-208ENST00000397030 ORMDL1Q9P0S3 153 aa13.59□□□□□ -0.23
MCF2L-208ENST00000397030 IGHV7-81A0A0B4J1V7 117 aa13.59□□□□□ -0.23
MCF2L-208ENST00000397030 RPL39LQ96EH5 51 aaKnown RBP13.59□□□□□ -0.23
MCF2L-208ENST00000397030 NDUFA1O15239 70 aa13.59□□□□□ -0.23
MCF2L-208ENST00000397030 FXYD5Q96DB9 178 aa13.59□□□□□ -0.23
MCF2L-208ENST00000397030 NDUFS6O75380 124 aaKnown RBP13.59□□□□□ -0.23
MCF2L-208ENST00000397030 HIGD2BQ4VC39 106 aa13.59□□□□□ -0.23
MCF2L-208ENST00000397030 AGPAT4-IT1Q9H0P7 198 aa13.59□□□□□ -0.23
MCF2L-208ENST00000397030 KAAG1Q9UBP8 84 aa13.59□□□□□ -0.23
MCF2L-208ENST00000397030 H0Y9J4 135 aa13.58□□□□□ -0.23
MCF2L-208ENST00000397030 C5orf56Q8N8D9 126 aa13.58□□□□□ -0.23
MCF2L-208ENST00000397030 KIAA2026Q5HYC2 2103 aa13.58□□□□□ -0.24
MCF2L-208ENST00000397030 CEP250Q9BV73 2442 aa13.58□□□□□ -0.24
MCF2L-208ENST00000397030 IGLL1P15814 213 aa13.58□□□□□ -0.24
MCF2L-208ENST00000397030 B9D2Q9BPU9 175 aa13.58□□□□□ -0.24
MCF2L-208ENST00000397030 OR11H6Q8NGC7 330 aa13.57□□□□□ -0.24
MCF2L-208ENST00000397030 LYPD6BQ8NI32 183 aa13.57□□□□□ -0.24
MCF2L-208ENST00000397030 VSIG2Q96IQ7 327 aa13.57□□□□□ -0.24
MCF2L-208ENST00000397030 PLXND1Q9Y4D7 1925 aa13.57□□□□□ -0.24
MCF2L-208ENST00000397030 K7ERJ3 54 aa13.57□□□□□ -0.24
MCF2L-208ENST00000397030 LY6G6CO95867 125 aa13.57□□□□□ -0.24
MCF2L-208ENST00000397030 C8orf31Q8N9H6 132 aa13.57□□□□□ -0.24
MCF2L-208ENST00000397030 SPTBN2O15020 2390 aa13.56□□□□□ -0.24
MCF2L-208ENST00000397030 A0A096LNI7 61 aa13.56□□□□□ -0.24
MCF2L-208ENST00000397030 CFPP27918 469 aa13.56□□□□□ -0.24
MCF2L-208ENST00000397030 CADP27708 2225 aa13.56□□□□□ -0.24
MCF2L-208ENST00000397030 IGLV2-18A0A075B6J9 118 aa13.56□□□□□ -0.24
MCF2L-208ENST00000397030 DAZ2Q13117 558 aaKnown RBP13.56□□□□□ -0.24
MCF2L-208ENST00000397030 DAZ4Q86SG3 579 aaKnown RBP13.56□□□□□ -0.24
MCF2L-208ENST00000397030 C18orf32Q8TCD1 76 aa13.56□□□□□ -0.24
MCF2L-208ENST00000397030 DAZ3Q9NR90 486 aaKnown RBP13.56□□□□□ -0.24
MCF2L-208ENST00000397030 GATA1P15976 413 aaPredicted RBP13.55□□□□□ -0.24
MCF2L-208ENST00000397030 DOPEY2Q9Y3R5 2298 aa13.55□□□□□ -0.24
MCF2L-208ENST00000397030 HILS1P60008 231 aa13.55□□□□□ -0.24
MCF2L-208ENST00000397030 WFDC9Q8NEX5 89 aa13.55□□□□□ -0.24
MCF2L-208ENST00000397030 DOCK8Q8NF50 2099 aa13.55□□□□□ -0.24
MCF2L-208ENST00000397030 VWA8A3KMH1 1905 aa13.55□□□□□ -0.24
MCF2L-208ENST00000397030 DEFB1P60022 68 aa13.54□□□□□ -0.24
MCF2L-208ENST00000397030 UTF1Q5T230 341 aa13.54□□□□□ -0.24
MCF2L-208ENST00000397030 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.54□□□□□ -0.24
MCF2L-208ENST00000397030 LTAP01374 205 aa13.54□□□□□ -0.24
MCF2L-208ENST00000397030 PRR20EP86478 221 aa13.54□□□□□ -0.24
MCF2L-208ENST00000397030 PRR20CP86479 221 aa13.54□□□□□ -0.24
MCF2L-208ENST00000397030 PRR20DP86480 221 aa13.54□□□□□ -0.24
MCF2L-208ENST00000397030 PRR20BP86481 221 aa13.54□□□□□ -0.24
MCF2L-208ENST00000397030 PRR20AP86496 221 aa13.54□□□□□ -0.24
MCF2L-208ENST00000397030 SPTBN1Q01082 2364 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms