RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 TRBV7-9A0A0J9YWB2 115 aa7.44□□□□□ -1.22
NEDD8-202ENST00000396828 HLA-DRB4P13762 266 aa7.44□□□□□ -1.22
NEDD8-202ENST00000396828 TSPOP30536 169 aa7.44□□□□□ -1.22
NEDD8-202ENST00000396828 LEPP41159 167 aa7.44□□□□□ -1.22
NEDD8-202ENST00000396828 DEFB1P60022 68 aa7.44□□□□□ -1.22
NEDD8-202ENST00000396828 RHEBQ15382 184 aa7.44□□□□□ -1.22
NEDD8-202ENST00000396828 GDF5OSQ5U4N7 250 aa7.44□□□□□ -1.22
NEDD8-202ENST00000396828 Q6ZTC4 211 aa7.44□□□□□ -1.22
NEDD8-202ENST00000396828 STHQ8IWL8 128 aa7.44□□□□□ -1.22
NEDD8-202ENST00000396828 CSNK1G2-AS1Q8NCQ2 148 aa7.44□□□□□ -1.22
NEDD8-202ENST00000396828 CLRN3Q8NCR9 226 aa7.44□□□□□ -1.22
NEDD8-202ENST00000396828 ODF3Q96PU9 254 aa7.44□□□□□ -1.22
NEDD8-202ENST00000396828 MLST8Q9BVC4 326 aa7.44□□□□□ -1.22
NEDD8-202ENST00000396828 HLA-DRB4X5D2U9 266 aa7.44□□□□□ -1.22
NEDD8-202ENST00000396828 H3BMM0 161 aa7.43□□□□□ -1.22
NEDD8-202ENST00000396828 GCGP01275 180 aa7.43□□□□□ -1.22
NEDD8-202ENST00000396828 IGKV3-20P01619 116 aa7.43□□□□□ -1.22
NEDD8-202ENST00000396828 IGLV2-8P01709 118 aa7.43□□□□□ -1.22
NEDD8-202ENST00000396828 MT-ND4LP03901 98 aa7.43□□□□□ -1.22
NEDD8-202ENST00000396828 GPX1P07203 203 aa7.43□□□□□ -1.22
NEDD8-202ENST00000396828 ERVFC1-1P60608 527 aa7.43□□□□□ -1.22
NEDD8-202ENST00000396828 SMUG1Q53HV7 270 aa7.43□□□□□ -1.22
NEDD8-202ENST00000396828 PRR27Q6MZM9 219 aa7.43□□□□□ -1.22
NEDD8-202ENST00000396828 C15orf54Q8N8G6 183 aa7.43□□□□□ -1.22
NEDD8-202ENST00000396828 ISOC2Q96AB3 205 aa7.43□□□□□ -1.22
NEDD8-202ENST00000396828 DAZAP1Q96EP5 407 aaKnown RBP7.43□□□□□ -1.22
NEDD8-202ENST00000396828 C8orf49Q96NF6 230 aa7.43□□□□□ -1.22
NEDD8-202ENST00000396828 CELA1Q9UNI1 258 aa7.43□□□□□ -1.22
NEDD8-202ENST00000396828 K7EN84 100 aa7.42□□□□□ -1.22
NEDD8-202ENST00000396828 PPP1R2P9O14990 202 aa7.42□□□□□ -1.22
NEDD8-202ENST00000396828 NUTF2P61970 127 aaKnown RBP7.42□□□□□ -1.22
NEDD8-202ENST00000396828 IBA57Q5T440 356 aaKnown RBP7.42□□□□□ -1.22
NEDD8-202ENST00000396828 FAM162BQ5T6X4 162 aa7.42□□□□□ -1.22
NEDD8-202ENST00000396828 COX8CQ7Z4L0 72 aa7.42□□□□□ -1.22
NEDD8-202ENST00000396828 ZC2HC1AQ96GY0 325 aa7.42□□□□□ -1.22
NEDD8-202ENST00000396828 SFRP2Q96HF1 295 aa7.42□□□□□ -1.22
NEDD8-202ENST00000396828 FAM19A4Q96LR4 140 aa7.42□□□□□ -1.22
NEDD8-202ENST00000396828 CLUHP3Q96NS8 147 aa7.42□□□□□ -1.22
NEDD8-202ENST00000396828 RPS10P5Q9NQ39 176 aa7.42□□□□□ -1.22
NEDD8-202ENST00000396828 PGPEP1Q9NXJ5 209 aa7.42□□□□□ -1.22
NEDD8-202ENST00000396828 C7orf77A4D0Y5 90 aa7.41□□□□□ -1.22
NEDD8-202ENST00000396828 CRISP2P16562 243 aa7.41□□□□□ -1.22
NEDD8-202ENST00000396828 CDKN1BP46527 198 aa7.41□□□□□ -1.22
NEDD8-202ENST00000396828 OR5I1Q13606 314 aa7.41□□□□□ -1.22
NEDD8-202ENST00000396828 FAM231DQ6ZW35 169 aa7.41□□□□□ -1.22
NEDD8-202ENST00000396828 OR10G8Q8NGN5 311 aa7.41□□□□□ -1.22
NEDD8-202ENST00000396828 ANAPC16Q96DE5 110 aa7.41□□□□□ -1.22
NEDD8-202ENST00000396828 CTDSP1Q9GZU7 261 aa7.41□□□□□ -1.22
NEDD8-202ENST00000396828 IGHV4-4A0A075B6R2 117 aa7.4□□□□□ -1.22
NEDD8-202ENST00000396828 A0A087WWC5 75 aa7.4□□□□□ -1.22
NEDD8-202ENST00000396828 A8MTW9 85 aa7.4□□□□□ -1.22
NEDD8-202ENST00000396828 FABP5P3A8MUU1 101 aa7.4□□□□□ -1.22
NEDD8-202ENST00000396828 J3KRW8 73 aa7.4□□□□□ -1.22
NEDD8-202ENST00000396828 P01737 135 aa7.4□□□□□ -1.22
NEDD8-202ENST00000396828 AMBPP02760 352 aa7.4□□□□□ -1.22
NEDD8-202ENST00000396828 PFN1P07737 140 aaKnown RBP7.4□□□□□ -1.22
NEDD8-202ENST00000396828 MIFP14174 115 aa7.4□□□□□ -1.22
NEDD8-202ENST00000396828 RNASE4P34096 147 aaKnown RBP7.4□□□□□ -1.22
NEDD8-202ENST00000396828 TCTAP57738 103 aa7.4□□□□□ -1.22
NEDD8-202ENST00000396828 SPINK13Q1W4C9 94 aa7.4□□□□□ -1.22
NEDD8-202ENST00000396828 C12orf74Q32Q52 190 aa7.4□□□□□ -1.22
NEDD8-202ENST00000396828 RNF212Q495C1 297 aa7.4□□□□□ -1.22
NEDD8-202ENST00000396828 MORN3Q6PF18 240 aaPredicted RBP7.4□□□□□ -1.22
NEDD8-202ENST00000396828 AMTNQ6UX39 209 aa7.4□□□□□ -1.22
NEDD8-202ENST00000396828 ZFAND2AQ8N6M9 145 aa7.4□□□□□ -1.22
NEDD8-202ENST00000396828 RNASE7Q9H1E1 156 aaKnown RBP7.4□□□□□ -1.22
NEDD8-202ENST00000396828 OSTCQ9NRP0 149 aa7.4□□□□□ -1.22
NEDD8-202ENST00000396828 TRAV10A0A0B4J240 114 aa7.39□□□□□ -1.23
NEDD8-202ENST00000396828 TRAV21A0A0B4J279 112 aa7.39□□□□□ -1.23
NEDD8-202ENST00000396828 A0A1B0GVY2 172 aa7.39□□□□□ -1.23
NEDD8-202ENST00000396828 C19orf71A6NCJ1 209 aa7.39□□□□□ -1.23
NEDD8-202ENST00000396828 ZNF705GA8MUZ8 300 aaPredicted RBP7.39□□□□□ -1.23
NEDD8-202ENST00000396828 KLLNB2CW77 178 aa7.39□□□□□ -1.23
NEDD8-202ENST00000396828 H7BYZ3 331 aa7.39□□□□□ -1.23
NEDD8-202ENST00000396828 GATCO43716 136 aaKnown RBP7.39□□□□□ -1.23
NEDD8-202ENST00000396828 SH2D1AO60880 128 aa7.39□□□□□ -1.23
NEDD8-202ENST00000396828 NUDT10Q8NFP7 164 aa7.39□□□□□ -1.23
NEDD8-202ENST00000396828 NUDT11Q96G61 164 aa7.39□□□□□ -1.23
NEDD8-202ENST00000396828 TMEM242Q9NWH2 141 aa7.39□□□□□ -1.23
NEDD8-202ENST00000396828 HSPG2P98160 4391 aa7.39□□□□□ -1.23
NEDD8-202ENST00000396828 XKRY2A2RUG3 117 aa7.38□□□□□ -1.23
NEDD8-202ENST00000396828 C7orf71A4D174 169 aa7.38□□□□□ -1.23
NEDD8-202ENST00000396828 M0R2Z0 102 aa7.38□□□□□ -1.23
NEDD8-202ENST00000396828 CRIP1P50238 77 aa7.38□□□□□ -1.23
NEDD8-202ENST00000396828 ZNF80P51504 273 aaPredicted RBP7.38□□□□□ -1.23
NEDD8-202ENST00000396828 BTN1A1Q13410 526 aa7.38□□□□□ -1.23
NEDD8-202ENST00000396828 Q6AWC8 147 aa7.38□□□□□ -1.23
NEDD8-202ENST00000396828 C1QTNF4Q9BXJ3 329 aa7.38□□□□□ -1.23
NEDD8-202ENST00000396828 RPP21Q9H633 154 aaKnown RBP7.38□□□□□ -1.23
NEDD8-202ENST00000396828 XCL2Q9UBD3 114 aa7.38□□□□□ -1.23
NEDD8-202ENST00000396828 TRAV12-2A0A075B6T6 113 aa7.37□□□□□ -1.23
NEDD8-202ENST00000396828 DEFB131BA0A096LNP1 70 aa7.37□□□□□ -1.23
NEDD8-202ENST00000396828 TRAV12-3A0A0B4J271 114 aa7.37□□□□□ -1.23
NEDD8-202ENST00000396828 TMEM189A5PLL7 270 aa7.37□□□□□ -1.23
NEDD8-202ENST00000396828 M0R2N4 97 aa7.37□□□□□ -1.23
NEDD8-202ENST00000396828 INSP01308 110 aa7.37□□□□□ -1.23
NEDD8-202ENST00000396828 ORM1P02763 201 aa7.37□□□□□ -1.23
NEDD8-202ENST00000396828 S100PP25815 95 aa7.37□□□□□ -1.23
NEDD8-202ENST00000396828 FXYD7P58549 80 aa7.37□□□□□ -1.23
NEDD8-202ENST00000396828 RPS20P60866 119 aaKnown RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms