RNA–Protein interactions for RNA: ENST00000396083.6

THUMPD1-202, Transcript of THUMP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD1, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-202ENST00000396083 MRPS16Q9Y3D3 137 aaKnown RBP7.47□□□□□ -1.21
THUMPD1-202ENST00000396083 ZNF324O75467 553 aaPredicted RBP7.46□□□□□ -1.22
THUMPD1-202ENST00000396083 CXorf1O96002 111 aa7.46□□□□□ -1.22
THUMPD1-202ENST00000396083 STAG3L2P0CL84 134 aa7.46□□□□□ -1.22
THUMPD1-202ENST00000396083 STAG3L3P0CL85 134 aa7.46□□□□□ -1.22
THUMPD1-202ENST00000396083 FXYD7P58549 80 aa7.46□□□□□ -1.22
THUMPD1-202ENST00000396083 SNRPD3P62318 126 aaKnown RBP7.46□□□□□ -1.22
THUMPD1-202ENST00000396083 KIAA1644Q3SXP7 199 aa7.46□□□□□ -1.22
THUMPD1-202ENST00000396083 OR4C5Q8NGB2 326 aa7.46□□□□□ -1.22
THUMPD1-202ENST00000396083 BLNKQ8WV28 456 aa7.46□□□□□ -1.22
THUMPD1-202ENST00000396083 YTHDF2Q9Y5A9 579 aaKnown RBP7.46□□□□□ -1.22
THUMPD1-202ENST00000396083 LOC102724200A0A096LPH7 203 aaPredicted RBP7.46□□□□□ -1.22
THUMPD1-202ENST00000396083 MT-ND6P03923 174 aa7.46□□□□□ -1.22
THUMPD1-202ENST00000396083 WDR73Q6P4I2 378 aa7.46□□□□□ -1.22
THUMPD1-202ENST00000396083 MIR17HGQ75NE6 70 aa7.46□□□□□ -1.22
THUMPD1-202ENST00000396083 NIT1Q86X76 327 aa7.46□□□□□ -1.22
THUMPD1-202ENST00000396083 STHQ8IWL8 128 aa7.46□□□□□ -1.22
THUMPD1-202ENST00000396083 ATOH7Q8N100 152 aa7.46□□□□□ -1.22
THUMPD1-202ENST00000396083 C20orf173Q96LM9 149 aa7.46□□□□□ -1.22
THUMPD1-202ENST00000396083 SPINK4O60575 86 aa7.45□□□□□ -1.22
THUMPD1-202ENST00000396083 RPL7P18124 248 aaKnown RBP7.45□□□□□ -1.22
THUMPD1-202ENST00000396083 PLP1P60201 277 aa7.45□□□□□ -1.22
THUMPD1-202ENST00000396083 RPL19P84098 196 aaKnown RBP7.45□□□□□ -1.22
THUMPD1-202ENST00000396083 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.45□□□□□ -1.22
THUMPD1-202ENST00000396083 V9GYV3 84 aa7.45□□□□□ -1.22
THUMPD1-202ENST00000396083 C9JCJ5 164 aa7.45□□□□□ -1.22
THUMPD1-202ENST00000396083 MPDU1O75352 247 aa7.45□□□□□ -1.22
THUMPD1-202ENST00000396083 MAJINQ3KP22 176 aa7.45□□□□□ -1.22
THUMPD1-202ENST00000396083 TMEM136Q6ZRR5 245 aa7.45□□□□□ -1.22
THUMPD1-202ENST00000396083 BORCS7Q96B45 105 aa7.45□□□□□ -1.22
THUMPD1-202ENST00000396083 LY96Q9Y6Y9 160 aa7.45□□□□□ -1.22
THUMPD1-202ENST00000396083 SRIP30626 198 aa7.44□□□□□ -1.22
THUMPD1-202ENST00000396083 BPIFA4PQ86YQ2 179 aa7.44□□□□□ -1.22
THUMPD1-202ENST00000396083 FAM19A2Q8N3H0 131 aa7.44□□□□□ -1.22
THUMPD1-202ENST00000396083 ZMAT4Q9H898 229 aa7.44□□□□□ -1.22
THUMPD1-202ENST00000396083 OR7C2O60412 319 aa7.44□□□□□ -1.22
THUMPD1-202ENST00000396083 CA1P00915 261 aaPredicted RBP7.44□□□□□ -1.22
THUMPD1-202ENST00000396083 PPBPP02775 128 aa7.44□□□□□ -1.22
THUMPD1-202ENST00000396083 NTF3P20783 257 aa7.44□□□□□ -1.22
THUMPD1-202ENST00000396083 GCHFRP30047 84 aa7.44□□□□□ -1.22
THUMPD1-202ENST00000396083 COX19Q49B96 90 aa7.44□□□□□ -1.22
THUMPD1-202ENST00000396083 OR1L4Q8NGR5 311 aa7.44□□□□□ -1.22
THUMPD1-202ENST00000396083 TSKUQ8WUA8 353 aa7.44□□□□□ -1.22
THUMPD1-202ENST00000396083 C11orf52Q96A22 123 aa7.44□□□□□ -1.22
THUMPD1-202ENST00000396083 CSMD3Q7Z407 3707 aa7.43□□□□□ -1.22
THUMPD1-202ENST00000396083 PMCHL1Q16048 86 aa7.43□□□□□ -1.22
THUMPD1-202ENST00000396083 CBY3A6NI87 242 aa7.43□□□□□ -1.22
THUMPD1-202ENST00000396083 SOCS3O14543 225 aa7.43□□□□□ -1.22
THUMPD1-202ENST00000396083 DEFB4AO15263 64 aa7.43□□□□□ -1.22
THUMPD1-202ENST00000396083 VAMP3Q15836 100 aa7.43□□□□□ -1.22
THUMPD1-202ENST00000396083 XCL2Q9UBD3 114 aa7.43□□□□□ -1.22
THUMPD1-202ENST00000396083 U3KQK5 164 aa7.43□□□□□ -1.22
THUMPD1-202ENST00000396083 IGHV3OR16-12A0A075B7B8 117 aa7.42□□□□□ -1.22
THUMPD1-202ENST00000396083 TRAV9-2A0A087WT02 112 aa7.42□□□□□ -1.22
THUMPD1-202ENST00000396083 TRAV8-2A0A0B4J237 113 aa7.42□□□□□ -1.22
THUMPD1-202ENST00000396083 M0R3E3 92 aa7.42□□□□□ -1.22
THUMPD1-202ENST00000396083 ID1P41134 155 aa7.42□□□□□ -1.22
THUMPD1-202ENST00000396083 TCL1AP56279 114 aa7.42□□□□□ -1.22
THUMPD1-202ENST00000396083 RHOBP62745 196 aa7.42□□□□□ -1.22
THUMPD1-202ENST00000396083 LINC00322Q6ZN03 302 aaPredicted RBP7.42□□□□□ -1.22
THUMPD1-202ENST00000396083 SMIM15Q7Z3B0 74 aa7.42□□□□□ -1.22
THUMPD1-202ENST00000396083 VPS25Q9BRG1 176 aa7.42□□□□□ -1.22
THUMPD1-202ENST00000396083 A8MZ25 164 aa7.42□□□□□ -1.22
THUMPD1-202ENST00000396083 J3KRW8 73 aa7.42□□□□□ -1.22
THUMPD1-202ENST00000396083 ISLRO14498 428 aa7.42□□□□□ -1.22
THUMPD1-202ENST00000396083 MRPS12O15235 138 aaKnown RBP7.42□□□□□ -1.22
THUMPD1-202ENST00000396083 HLA-DQA1P01909 254 aa7.42□□□□□ -1.22
THUMPD1-202ENST00000396083 GNG4P50150 75 aa7.42□□□□□ -1.22
THUMPD1-202ENST00000396083 CENPWQ5EE01 88 aa7.42□□□□□ -1.22
THUMPD1-202ENST00000396083 EXOC3-AS1Q8N2X6 119 aa7.42□□□□□ -1.22
THUMPD1-202ENST00000396083 SLC25A2Q9BXI2 301 aa7.42□□□□□ -1.22
THUMPD1-202ENST00000396083 CSTL1Q9H114 145 aa7.42□□□□□ -1.22
THUMPD1-202ENST00000396083 RNF24Q9Y225 148 aa7.42□□□□□ -1.22
THUMPD1-202ENST00000396083 MRPL54Q6P161 138 aaKnown RBP7.41□□□□□ -1.22
THUMPD1-202ENST00000396083 S100A7AQ86SG5 101 aa7.41□□□□□ -1.22
THUMPD1-202ENST00000396083 TM2D3Q9BRN9 247 aa7.41□□□□□ -1.22
THUMPD1-202ENST00000396083 RNASE7Q9H1E1 156 aaKnown RBP7.41□□□□□ -1.22
THUMPD1-202ENST00000396083 APCSP02743 223 aa7.41□□□□□ -1.22
THUMPD1-202ENST00000396083 S100A7P31151 101 aa7.41□□□□□ -1.22
THUMPD1-202ENST00000396083 APOC4P55056 127 aa7.41□□□□□ -1.22
THUMPD1-202ENST00000396083 HIST1H1AQ02539 215 aaPredicted RBP7.41□□□□□ -1.22
THUMPD1-202ENST00000396083 GPR82Q96P67 336 aa7.41□□□□□ -1.22
THUMPD1-202ENST00000396083 SPATA25Q9BR10 227 aa7.41□□□□□ -1.22
THUMPD1-202ENST00000396083 PRAC2D3DTV9 90 aa7.4□□□□□ -1.22
THUMPD1-202ENST00000396083 H3BMM0 161 aa7.4□□□□□ -1.22
THUMPD1-202ENST00000396083 M0R2Z0 102 aa7.4□□□□□ -1.22
THUMPD1-202ENST00000396083 PQLC2Q6ZP29 291 aa7.4□□□□□ -1.22
THUMPD1-202ENST00000396083 ERASQ7Z444 233 aa7.4□□□□□ -1.22
THUMPD1-202ENST00000396083 FAM167A-AS1Q96KT0 104 aa7.4□□□□□ -1.22
THUMPD1-202ENST00000396083 ZNF331Q9NQX6 463 aaPredicted RBP7.4□□□□□ -1.22
THUMPD1-202ENST00000396083 OSTCQ9NRP0 149 aa7.4□□□□□ -1.22
THUMPD1-202ENST00000396083 TRAV2A0A0B4J234 112 aa7.4□□□□□ -1.23
THUMPD1-202ENST00000396083 UBE2L3P68036 154 aaKnown RBP7.4□□□□□ -1.23
THUMPD1-202ENST00000396083 OCIAD2Q56VL3 154 aa7.4□□□□□ -1.23
THUMPD1-202ENST00000396083 EBLN2Q6P2I7 272 aa7.4□□□□□ -1.23
THUMPD1-202ENST00000396083 TRPT1Q86TN4 253 aaKnown RBP7.4□□□□□ -1.23
THUMPD1-202ENST00000396083 C18orf32Q8TCD1 76 aa7.4□□□□□ -1.23
THUMPD1-202ENST00000396083 PAXXQ9BUH6 204 aa7.4□□□□□ -1.23
THUMPD1-202ENST00000396083 CST9LQ9H4G1 147 aa7.4□□□□□ -1.23
THUMPD1-202ENST00000396083 TRAV12-2A0A075B6T6 113 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms