RNA–Protein interactions for RNA: ENST00000395980.6

BDNF-204, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-204ENST00000395980 TRAV21A0A0B4J279 112 aa6.62□□□□□ -1.35
BDNF-204ENST00000395980 IGHV1-69DA0A0B4J2H0 117 aa6.62□□□□□ -1.35
BDNF-204ENST00000395980 ATP6V0E1O15342 81 aa6.62□□□□□ -1.35
BDNF-204ENST00000395980 COX6B1P14854 86 aa6.62□□□□□ -1.35
BDNF-204ENST00000395980 SCGB2A2Q13296 93 aa6.62□□□□□ -1.35
BDNF-204ENST00000395980 C2orf66Q6UXQ4 117 aa6.62□□□□□ -1.35
BDNF-204ENST00000395980 CLEC19AQ6UXS0 136 aa6.62□□□□□ -1.35
BDNF-204ENST00000395980 CYSLTR1Q9Y271 337 aa6.62□□□□□ -1.35
BDNF-204ENST00000395980 FOXI1Q12951 378 aa6.62□□□□□ -1.35
BDNF-204ENST00000395980 POM121L12Q8N7R1 296 aa6.62□□□□□ -1.35
BDNF-204ENST00000395980 SIRPDQ9H106 197 aa6.62□□□□□ -1.35
BDNF-204ENST00000395980 TPRP12270 2363 aaKnown RBP6.62□□□□□ -1.35
BDNF-204ENST00000395980 APC2O95996 2303 aa6.62□□□□□ -1.35
BDNF-204ENST00000395980 LOC400499M0QZD8 3231 aa6.62□□□□□ -1.35
BDNF-204ENST00000395980 C11orf71Q6IPW1 123 aa6.62□□□□□ -1.35
BDNF-204ENST00000395980 VCX2Q9H322 139 aa6.62□□□□□ -1.35
BDNF-204ENST00000395980 MRPL16Q9NX20 251 aaKnown RBP6.62□□□□□ -1.35
BDNF-204ENST00000395980 CNOT1A5YKK6 2376 aaKnown RBP6.62□□□□□ -1.35
BDNF-204ENST00000395980 IGHV3-66A0A0C4DH42 116 aa6.61□□□□□ -1.35
BDNF-204ENST00000395980 PRSS29PA6NIE9 313 aa6.61□□□□□ -1.35
BDNF-204ENST00000395980 ZNF815PA8K554 130 aa6.61□□□□□ -1.35
BDNF-204ENST00000395980 OVOL1O14753 267 aa6.61□□□□□ -1.35
BDNF-204ENST00000395980 ASIPP42127 132 aa6.61□□□□□ -1.35
BDNF-204ENST00000395980 UBE2D3P61077 147 aa6.61□□□□□ -1.35
BDNF-204ENST00000395980 UBE2D2P62837 147 aa6.61□□□□□ -1.35
BDNF-204ENST00000395980 PRR9Q5T870 116 aa6.61□□□□□ -1.35
BDNF-204ENST00000395980 GLMPQ8WWB7 406 aa6.61□□□□□ -1.35
BDNF-204ENST00000395980 C16orf92Q96LL3 132 aa6.61□□□□□ -1.35
BDNF-204ENST00000395980 TRBV7-9A0A0J9YWB2 115 aa6.61□□□□□ -1.35
BDNF-204ENST00000395980 RNF223E7ERA6 249 aa6.61□□□□□ -1.35
BDNF-204ENST00000395980 PRR30Q53SZ7 412 aaPredicted RBP6.61□□□□□ -1.35
BDNF-204ENST00000395980 ZFAND2AQ8N6M9 145 aa6.61□□□□□ -1.35
BDNF-204ENST00000395980 WDFY4Q6ZS81 3184 aa6.61□□□□□ -1.35
BDNF-204ENST00000395980 HERVK_113P61574 105 aa6.61□□□□□ -1.35
BDNF-204ENST00000395980 MTURNQ8N3F0 131 aa6.61□□□□□ -1.35
BDNF-204ENST00000395980 ARHGAP32A7KAX9 2087 aa6.61□□□□□ -1.35
BDNF-204ENST00000395980 LY6HO94772 140 aa6.6□□□□□ -1.35
BDNF-204ENST00000395980 UBE2E1P51965 193 aa6.6□□□□□ -1.35
BDNF-204ENST00000395980 APRG1Q8IVJ8 170 aa6.6□□□□□ -1.35
BDNF-204ENST00000395980 SPENQ96T58 3664 aaKnown RBP6.6□□□□□ -1.35
BDNF-204ENST00000395980 NXPH4O95158 308 aa6.6□□□□□ -1.35
BDNF-204ENST00000395980 CD7P09564 240 aa6.6□□□□□ -1.35
BDNF-204ENST00000395980 SCGB1D4Q6XE38 83 aa6.6□□□□□ -1.35
BDNF-204ENST00000395980 KLK15Q9H2R5 256 aa6.6□□□□□ -1.35
BDNF-204ENST00000395980 BDP1A6H8Y1 2624 aa6.6□□□□□ -1.35
BDNF-204ENST00000395980 SMCPP49901 116 aaPredicted RBP6.6□□□□□ -1.35
BDNF-204ENST00000395980 INSL3P51460 131 aa6.6□□□□□ -1.35
BDNF-204ENST00000395980 OR10J6PQ8NGY7 276 aa6.6□□□□□ -1.35
BDNF-204ENST00000395980 PHLDA3Q9Y5J5 127 aa6.6□□□□□ -1.35
BDNF-204ENST00000395980 MAP1BP46821 2468 aaKnown RBP6.6□□□□□ -1.35
BDNF-204ENST00000395980 TRBV20-1A0A075B6N2 111 aa6.6□□□□□ -1.35
BDNF-204ENST00000395980 IGHV3OR16-13A0A075B7E8 117 aa6.6□□□□□ -1.35
BDNF-204ENST00000395980 IGHV3-74A0A0B4J1X5 117 aa6.6□□□□□ -1.35
BDNF-204ENST00000395980 FAM223BA6NKX1 122 aa6.6□□□□□ -1.35
BDNF-204ENST00000395980 FAM90A27PA6NNH2 459 aa6.6□□□□□ -1.35
BDNF-204ENST00000395980 TSPAN13O95857 204 aa6.6□□□□□ -1.35
BDNF-204ENST00000395980 S100A4P26447 101 aaKnown RBP6.6□□□□□ -1.35
BDNF-204ENST00000395980 ATP5G2Q06055 141 aa6.6□□□□□ -1.35
BDNF-204ENST00000395980 FAM223AQ8IWN6 122 aa6.6□□□□□ -1.35
BDNF-204ENST00000395980 RPL39LQ96EH5 51 aaKnown RBP6.6□□□□□ -1.35
BDNF-204ENST00000395980 AJUBAQ96IF1 538 aa6.6□□□□□ -1.35
BDNF-204ENST00000395980 IGHV4OR15-8A0A075B7B6 117 aa6.59□□□□□ -1.35
BDNF-204ENST00000395980 A0A087WW49 117 aa6.59□□□□□ -1.35
BDNF-204ENST00000395980 CKS1BP61024 79 aa6.59□□□□□ -1.35
BDNF-204ENST00000395980 SRSF9Q13242 221 aaKnown RBP eCLIP6.59□□□□□ -1.35
BDNF-204ENST00000395980 Q6ZQT7 251 aa6.59□□□□□ -1.35
BDNF-204ENST00000395980 FAM19A4Q96LR4 140 aa6.59□□□□□ -1.35
BDNF-204ENST00000395980 CRIP2P52943 208 aaPredicted RBP6.59□□□□□ -1.35
BDNF-204ENST00000395980 SBSPONQ8IVN8 264 aa6.59□□□□□ -1.35
BDNF-204ENST00000395980 PPDPFLQ8WWR9 84 aa6.59□□□□□ -1.35
BDNF-204ENST00000395980 C20orf173Q96LM9 149 aa6.59□□□□□ -1.35
BDNF-204ENST00000395980 CDIP1Q9H305 208 aa6.59□□□□□ -1.35
BDNF-204ENST00000395980 EP300Q09472 2414 aaPredicted RBP6.59□□□□□ -1.35
BDNF-204ENST00000395980 C14orf178Q8N769 122 aaPredicted RBP6.59□□□□□ -1.36
BDNF-204ENST00000395980 TMEM141Q96I45 108 aa6.59□□□□□ -1.36
BDNF-204ENST00000395980 WNK2Q9Y3S1 2297 aa6.58□□□□□ -1.36
BDNF-204ENST00000395980 IGHV3-49A0A0A0MS15 119 aa6.58□□□□□ -1.36
BDNF-204ENST00000395980 G3V318 75 aa6.58□□□□□ -1.36
BDNF-204ENST00000395980 SOCS3O14543 225 aa6.58□□□□□ -1.36
BDNF-204ENST00000395980 ZFP36P26651 326 aaKnown RBP6.58□□□□□ -1.36
BDNF-204ENST00000395980 TEN1Q86WV5 123 aa6.58□□□□□ -1.36
BDNF-204ENST00000395980 GPHB5Q86YW7 130 aa6.58□□□□□ -1.36
BDNF-204ENST00000395980 ZNF418Q8TF45 676 aaPredicted RBP6.58□□□□□ -1.36
BDNF-204ENST00000395980 PLEKHB2Q96CS7 222 aa6.58□□□□□ -1.36
BDNF-204ENST00000395980 A0A0J9YY99 117 aa6.58□□□□□ -1.36
BDNF-204ENST00000395980 GRNP28799 593 aaKnown RBP6.58□□□□□ -1.36
BDNF-204ENST00000395980 CRYBA4P53673 196 aa6.58□□□□□ -1.36
BDNF-204ENST00000395980 C19orf54Q5BKX5 351 aa6.58□□□□□ -1.36
BDNF-204ENST00000395980 NDUFA11Q86Y39 141 aa6.58□□□□□ -1.36
BDNF-204ENST00000395980 SYT8Q8NBV8 401 aa6.58□□□□□ -1.36
BDNF-204ENST00000395980 IGLV4-69A0A075B6H9 119 aa6.58□□□□□ -1.36
BDNF-204ENST00000395980 CRYGDP07320 174 aa6.58□□□□□ -1.36
BDNF-204ENST00000395980 MGPP08493 103 aa6.58□□□□□ -1.36
BDNF-204ENST00000395980 ANXA2RQ3ZCQ2 193 aa6.58□□□□□ -1.36
BDNF-204ENST00000395980 TIMM17AQ99595 171 aa6.58□□□□□ -1.36
BDNF-204ENST00000395980 ACACAQ13085 2346 aa6.57□□□□□ -1.36
BDNF-204ENST00000395980 M0QXV9 152 aa6.57□□□□□ -1.36
BDNF-204ENST00000395980 PMVKQ15126 192 aa6.57□□□□□ -1.36
BDNF-204ENST00000395980 IGIPA6NJ69 53 aa6.57□□□□□ -1.36
BDNF-204ENST00000395980 C11orf86A6NJI1 115 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms