RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 ORC5O43913 435 aa3.45□□□□□ -1.86
AP3S1-202ENST00000395548 SCO1O75880 301 aa3.45□□□□□ -1.86
AP3S1-202ENST00000395548 DEFB131AP59861 70 aa3.45□□□□□ -1.86
AP3S1-202ENST00000395548 LYZP61626 148 aa3.45□□□□□ -1.86
AP3S1-202ENST00000395548 AKR1C8PQ5T2L2 129 aa3.45□□□□□ -1.86
AP3S1-202ENST00000395548 SAMD13Q5VXD3 122 aa3.45□□□□□ -1.86
AP3S1-202ENST00000395548 Q6P435 159 aa3.45□□□□□ -1.86
AP3S1-202ENST00000395548 UNQ9165/PRO28630Q6UXU0 137 aa3.45□□□□□ -1.86
AP3S1-202ENST00000395548 PDPNQ86YL7 162 aa3.45□□□□□ -1.86
AP3S1-202ENST00000395548 Q8N814 137 aa3.45□□□□□ -1.86
AP3S1-202ENST00000395548 OR5H2Q8NGV7 314 aa3.45□□□□□ -1.86
AP3S1-202ENST00000395548 RHOXF1Q8NHV9 184 aa3.45□□□□□ -1.86
AP3S1-202ENST00000395548 CIRBP-AS1Q8TBR5 109 aa3.45□□□□□ -1.86
AP3S1-202ENST00000395548 MRPS24Q96EL2 167 aaKnown RBP3.45□□□□□ -1.86
AP3S1-202ENST00000395548 C16orf74Q96GX8 76 aa3.45□□□□□ -1.86
AP3S1-202ENST00000395548 HDHD3Q9BSH5 251 aaPredicted RBP3.45□□□□□ -1.86
AP3S1-202ENST00000395548 MAP1LC3BQ9GZQ8 125 aa3.45□□□□□ -1.86
AP3S1-202ENST00000395548 RNASE7Q9H1E1 156 aaKnown RBP3.45□□□□□ -1.86
AP3S1-202ENST00000395548 GTSF1LQ9H1H1 148 aa3.45□□□□□ -1.86
AP3S1-202ENST00000395548 TMEM138Q9NPI0 162 aa3.45□□□□□ -1.86
AP3S1-202ENST00000395548 UQCC1Q9NVA1 299 aa3.45□□□□□ -1.86
AP3S1-202ENST00000395548 OR52A1Q9UKL2 312 aa3.45□□□□□ -1.86
AP3S1-202ENST00000395548 IGLV11-55A0A075B6I3 123 aa3.44□□□□□ -1.86
AP3S1-202ENST00000395548 IGSF23A1L1A6 192 aa3.44□□□□□ -1.86
AP3S1-202ENST00000395548 KNCNA6PVL3 124 aa3.44□□□□□ -1.86
AP3S1-202ENST00000395548 INMT-MINDY4F8WBC2 141 aa3.44□□□□□ -1.86
AP3S1-202ENST00000395548 K7EP13 123 aa3.44□□□□□ -1.86
AP3S1-202ENST00000395548 OR10J4P0C629 311 aa3.44□□□□□ -1.86
AP3S1-202ENST00000395548 CCL1P22362 96 aa3.44□□□□□ -1.86
AP3S1-202ENST00000395548 RBP2P50120 134 aa3.44□□□□□ -1.86
AP3S1-202ENST00000395548 POLR2JP52435 117 aaKnown RBP3.44□□□□□ -1.86
AP3S1-202ENST00000395548 HERVK_113P63121 156 aa3.44□□□□□ -1.86
AP3S1-202ENST00000395548 FABP9Q0Z7S8 132 aa3.44□□□□□ -1.86
AP3S1-202ENST00000395548 SURF2Q15527 256 aaPredicted RBP3.44□□□□□ -1.86
AP3S1-202ENST00000395548 TMEM128Q5BJH2 165 aa3.44□□□□□ -1.86
AP3S1-202ENST00000395548 ZNF833PQ6ZTB9 187 aa3.44□□□□□ -1.86
AP3S1-202ENST00000395548 ANKRD29Q8N6D5 301 aa3.44□□□□□ -1.86
AP3S1-202ENST00000395548 SLC25A29Q8N8R3 303 aa3.44□□□□□ -1.86
AP3S1-202ENST00000395548 GDPD1Q8N9F7 314 aa3.44□□□□□ -1.86
AP3S1-202ENST00000395548 ZNF555Q8NEP9 628 aa3.44□□□□□ -1.86
AP3S1-202ENST00000395548 C15orf40Q8WUR7 153 aa3.44□□□□□ -1.86
AP3S1-202ENST00000395548 PBDC1Q9BVG4 233 aa3.44□□□□□ -1.86
AP3S1-202ENST00000395548 MED28Q9H204 178 aa3.44□□□□□ -1.86
AP3S1-202ENST00000395548 OR52D1Q9H346 318 aa3.44□□□□□ -1.86
AP3S1-202ENST00000395548 LYRM2Q9NU23 88 aaPredicted RBP3.44□□□□□ -1.86
AP3S1-202ENST00000395548 PRNDQ9UKY0 176 aa3.44□□□□□ -1.86
AP3S1-202ENST00000395548 SSPOA2VEC9 5147 aa3.44□□□□□ -1.86
AP3S1-202ENST00000395548 TRBV7-1A0A0A6YYK4 115 aa3.43□□□□□ -1.86
AP3S1-202ENST00000395548 TRAV26-2A0A0B4J265 109 aa3.43□□□□□ -1.86
AP3S1-202ENST00000395548 TMEM269A0A1B0GVZ9 245 aa3.43□□□□□ -1.86
AP3S1-202ENST00000395548 OR4C45A6NMZ5 311 aa3.43□□□□□ -1.86
AP3S1-202ENST00000395548 ZNF705FA8MVS1 300 aaPredicted RBP3.43□□□□□ -1.86
AP3S1-202ENST00000395548 SRSF10O75494 262 aaKnown RBP3.43□□□□□ -1.86
AP3S1-202ENST00000395548 CRYZL1O95825 349 aa3.43□□□□□ -1.86
AP3S1-202ENST00000395548 INSP01308 110 aa3.43□□□□□ -1.86
AP3S1-202ENST00000395548 IGLV3-1P01715 115 aa3.43□□□□□ -1.86
AP3S1-202ENST00000395548 PRH1P02810 166 aa3.43□□□□□ -1.86
AP3S1-202ENST00000395548 MAS1P04201 325 aa3.43□□□□□ -1.86
AP3S1-202ENST00000395548 SEC11BP0C7V7 166 aa3.43□□□□□ -1.86
AP3S1-202ENST00000395548 ZNF705DP0CH99 300 aaPredicted RBP3.43□□□□□ -1.86
AP3S1-202ENST00000395548 ZNF705BP0CI00 300 aaPredicted RBP3.43□□□□□ -1.86
AP3S1-202ENST00000395548 APELAP0DMC3 54 aa3.43□□□□□ -1.86
AP3S1-202ENST00000395548 ATP5G3P48201 142 aa3.43□□□□□ -1.86
AP3S1-202ENST00000395548 ESRGQ1W209 222 aa3.43□□□□□ -1.86
AP3S1-202ENST00000395548 TMEM241Q24JQ0 296 aa3.43□□□□□ -1.86
AP3S1-202ENST00000395548 TMEM78Q5T7P6 136 aa3.43□□□□□ -1.86
AP3S1-202ENST00000395548 TOMM20LQ6UXN7 152 aa3.43□□□□□ -1.86
AP3S1-202ENST00000395548 ZNF705AQ6ZN79 300 aaPredicted RBP3.43□□□□□ -1.86
AP3S1-202ENST00000395548 CEND1Q8N111 149 aa3.43□□□□□ -1.86
AP3S1-202ENST00000395548 SUMF2Q8NBJ7 301 aa3.43□□□□□ -1.86
AP3S1-202ENST00000395548 TMEM147Q9BVK8 224 aa3.43□□□□□ -1.86
AP3S1-202ENST00000395548 ANAPC10Q9UM13 185 aa3.43□□□□□ -1.86
AP3S1-202ENST00000395548 SSR3Q9UNL2 185 aa3.43□□□□□ -1.86
AP3S1-202ENST00000395548 IGKV3-7A0A075B6H7 116 aa3.42□□□□□ -1.86
AP3S1-202ENST00000395548 TRAV2A0A0B4J234 112 aa3.42□□□□□ -1.86
AP3S1-202ENST00000395548 TMEM30CPA0ZSE6 113 aa3.42□□□□□ -1.86
AP3S1-202ENST00000395548 LRCOL1A6NCL2 159 aa3.42□□□□□ -1.86
AP3S1-202ENST00000395548 OR2T8A6NH00 312 aa3.42□□□□□ -1.86
AP3S1-202ENST00000395548 ZFP92A6NM28 416 aa3.42□□□□□ -1.86
AP3S1-202ENST00000395548 SLC17A3O00476 420 aa3.42□□□□□ -1.86
AP3S1-202ENST00000395548 CDRT1O95170 752 aa3.42□□□□□ -1.86
AP3S1-202ENST00000395548 ZNF688P0C7X2 276 aa3.42□□□□□ -1.86
AP3S1-202ENST00000395548 S100A2P29034 98 aa3.42□□□□□ -1.86
AP3S1-202ENST00000395548 NUDT2P50583 147 aa3.42□□□□□ -1.86
AP3S1-202ENST00000395548 FXYD6P3P58550 94 aa3.42□□□□□ -1.86
AP3S1-202ENST00000395548 KRTAP10-8P60410 259 aa3.42□□□□□ -1.86
AP3S1-202ENST00000395548 GNG5P63218 68 aa3.42□□□□□ -1.86
AP3S1-202ENST00000395548 DAZ2Q13117 558 aaKnown RBP3.42□□□□□ -1.86
AP3S1-202ENST00000395548 BTN1A1Q13410 526 aa3.42□□□□□ -1.86
AP3S1-202ENST00000395548 TDRG1Q3Y452 100 aa3.42□□□□□ -1.86
AP3S1-202ENST00000395548 DAZ4Q86SG3 579 aaKnown RBP3.42□□□□□ -1.86
AP3S1-202ENST00000395548 ORMDL3Q8N138 153 aa3.42□□□□□ -1.86
AP3S1-202ENST00000395548 FAM24BQ8N5W8 94 aa3.42□□□□□ -1.86
AP3S1-202ENST00000395548 RNASE11Q8TAA1 199 aaKnown RBP3.42□□□□□ -1.86
AP3S1-202ENST00000395548 THEM6Q8WUY1 208 aa3.42□□□□□ -1.86
AP3S1-202ENST00000395548 GNPNAT1Q96EK6 184 aaPredicted RBP3.42□□□□□ -1.86
AP3S1-202ENST00000395548 ABHD14BQ96IU4 210 aa3.42□□□□□ -1.86
AP3S1-202ENST00000395548 CNBD2Q96M20 576 aa3.42□□□□□ -1.86
AP3S1-202ENST00000395548 DERL3Q96Q80 235 aa3.42□□□□□ -1.86
AP3S1-202ENST00000395548 SPIN2AQ99865 258 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms