RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 FAM159AQ6UWV7 190 aa9.26□□□□□ -0.93
SCAF11-203ENST00000395453 OR10G4Q8NGN3 311 aa9.26□□□□□ -0.93
SCAF11-203ENST00000395453 OR10G9Q8NGN4 311 aa9.26□□□□□ -0.93
SCAF11-203ENST00000395453 OR10G7Q8NGN6 311 aa9.26□□□□□ -0.93
SCAF11-203ENST00000395453 TVP23CQ96ET8 276 aa9.26□□□□□ -0.93
SCAF11-203ENST00000395453 KRTAP10-2P60368 255 aa9.25□□□□□ -0.93
SCAF11-203ENST00000395453 MRPL23Q16540 153 aaKnown RBP9.25□□□□□ -0.93
SCAF11-203ENST00000395453 TMEM183BQ1AE95 376 aa9.25□□□□□ -0.93
SCAF11-203ENST00000395453 LYPD5Q6UWN5 251 aa9.25□□□□□ -0.93
SCAF11-203ENST00000395453 Q6ZRN7 208 aaPredicted RBP9.25□□□□□ -0.93
SCAF11-203ENST00000395453 GOLT1AQ6ZVE7 132 aa9.25□□□□□ -0.93
SCAF11-203ENST00000395453 TMEM183AQ8IXX5 376 aa9.25□□□□□ -0.93
SCAF11-203ENST00000395453 OR2G3Q8NGZ4 309 aa9.25□□□□□ -0.93
SCAF11-203ENST00000395453 CMTM2Q8TAZ6 248 aa9.25□□□□□ -0.93
SCAF11-203ENST00000395453 SUN5Q8TC36 379 aa9.25□□□□□ -0.93
SCAF11-203ENST00000395453 ZNF479Q96JC4 524 aa9.25□□□□□ -0.93
SCAF11-203ENST00000395453 C8orf49Q96NF6 230 aa9.25□□□□□ -0.93
SCAF11-203ENST00000395453 TRGV11A0A075B6L2 103 aa9.24□□□□□ -0.93
SCAF11-203ENST00000395453 NXPH4O95158 308 aa9.24□□□□□ -0.93
SCAF11-203ENST00000395453 AQP10Q96PS8 301 aa9.24□□□□□ -0.93
SCAF11-203ENST00000395453 MYCBP2O75592 4640 aa9.24□□□□□ -0.93
SCAF11-203ENST00000395453 TRAV8-1A0A0A6YYK1 113 aa9.23□□□□□ -0.93
SCAF11-203ENST00000395453 TRAV21A0A0B4J279 112 aa9.23□□□□□ -0.93
SCAF11-203ENST00000395453 TRGV4A0A0C4DH28 118 aa9.23□□□□□ -0.93
SCAF11-203ENST00000395453 HMGB3O15347 200 aaKnown RBP9.23□□□□□ -0.93
SCAF11-203ENST00000395453 GNRH2O43555 120 aa9.23□□□□□ -0.93
SCAF11-203ENST00000395453 PTTG1O95997 202 aa9.23□□□□□ -0.93
SCAF11-203ENST00000395453 SFTA3P0C7M3 94 aa9.23□□□□□ -0.93
SCAF11-203ENST00000395453 STAG3L2P0CL84 134 aa9.23□□□□□ -0.93
SCAF11-203ENST00000395453 STAG3L3P0CL85 134 aa9.23□□□□□ -0.93
SCAF11-203ENST00000395453 LINC00315P59091 139 aa9.23□□□□□ -0.93
SCAF11-203ENST00000395453 NEGR1Q7Z3B1 354 aa9.23□□□□□ -0.93
SCAF11-203ENST00000395453 PSMG3Q9BT73 122 aaPredicted RBP9.23□□□□□ -0.93
SCAF11-203ENST00000395453 FLG2Q5D862 2391 aaPredicted RBP9.22□□□□□ -0.93
SCAF11-203ENST00000395453 IGHV3-16A0A0C4DH30 117 aa9.22□□□□□ -0.93
SCAF11-203ENST00000395453 K7EQD1 137 aa9.22□□□□□ -0.93
SCAF11-203ENST00000395453 ARL14EPLP0DKL9 152 aa9.22□□□□□ -0.93
SCAF11-203ENST00000395453 CDC34P49427 236 aaPredicted RBP9.22□□□□□ -0.93
SCAF11-203ENST00000395453 SERF2P84101 59 aa9.22□□□□□ -0.93
SCAF11-203ENST00000395453 RAB24Q969Q5 203 aa9.22□□□□□ -0.93
SCAF11-203ENST00000395453 TREM1Q9NP99 234 aa9.22□□□□□ -0.93
SCAF11-203ENST00000395453 RPH3ALQ9UNE2 315 aa9.22□□□□□ -0.93
SCAF11-203ENST00000395453 TRAV4A0A0B4J268 109 aa9.21□□□□□ -0.94
SCAF11-203ENST00000395453 SERTM2A0A1B0GWG4 89 aa9.21□□□□□ -0.94
SCAF11-203ENST00000395453 M0R2P5 195 aa9.21□□□□□ -0.94
SCAF11-203ENST00000395453 ATP6V0CP27449 155 aa9.21□□□□□ -0.94
SCAF11-203ENST00000395453 GNG5P63218 68 aa9.21□□□□□ -0.94
SCAF11-203ENST00000395453 Q5BKY6 102 aa9.21□□□□□ -0.94
SCAF11-203ENST00000395453 HSD17B11Q8NBQ5 300 aa9.21□□□□□ -0.94
SCAF11-203ENST00000395453 FRZBQ92765 325 aa9.21□□□□□ -0.94
SCAF11-203ENST00000395453 MED28Q9H204 178 aa9.21□□□□□ -0.94
SCAF11-203ENST00000395453 NAGKQ9UJ70 344 aa9.21□□□□□ -0.94
SCAF11-203ENST00000395453 F6UZH7 168 aa9.2□□□□□ -0.94
SCAF11-203ENST00000395453 MBP02144 154 aa9.2□□□□□ -0.94
SCAF11-203ENST00000395453 ORM1P02763 201 aa9.2□□□□□ -0.94
SCAF11-203ENST00000395453 TYMSP04818 313 aa9.2□□□□□ -0.94
SCAF11-203ENST00000395453 GCHFRP30047 84 aa9.2□□□□□ -0.94
SCAF11-203ENST00000395453 Q5VSD8 79 aa9.2□□□□□ -0.94
SCAF11-203ENST00000395453 C5orf17Q8NAS9 161 aa9.2□□□□□ -0.94
SCAF11-203ENST00000395453 KCNS1Q96KK3 526 aa9.2□□□□□ -0.94
SCAF11-203ENST00000395453 TNFSF18Q9UNG2 199 aa9.2□□□□□ -0.94
SCAF11-203ENST00000395453 FAT1Q14517 4588 aa9.2□□□□□ -0.94
SCAF11-203ENST00000395453 K7EP13 123 aa9.19□□□□□ -0.94
SCAF11-203ENST00000395453 IGLV2-11P01706 119 aa9.19□□□□□ -0.94
SCAF11-203ENST00000395453 TCRAP04437 139 aa9.19□□□□□ -0.94
SCAF11-203ENST00000395453 GYPEP15421 78 aa9.19□□□□□ -0.94
SCAF11-203ENST00000395453 SRIP30626 198 aa9.19□□□□□ -0.94
SCAF11-203ENST00000395453 OR4C5Q8NGB2 326 aa9.19□□□□□ -0.94
SCAF11-203ENST00000395453 ASB13Q8WXK3 278 aa9.19□□□□□ -0.94
SCAF11-203ENST00000395453 SGK494Q96LW2 274 aa9.19□□□□□ -0.94
SCAF11-203ENST00000395453 MRPL18Q9H0U6 180 aaKnown RBP9.19□□□□□ -0.94
SCAF11-203ENST00000395453 SDF2L1Q9HCN8 221 aa9.19□□□□□ -0.94
SCAF11-203ENST00000395453 TNFRSF18Q9Y5U5 241 aa9.19□□□□□ -0.94
SCAF11-203ENST00000395453 GIPP09681 153 aaPredicted RBP9.18□□□□□ -0.94
SCAF11-203ENST00000395453 ZNF80P51504 273 aaPredicted RBP9.18□□□□□ -0.94
SCAF11-203ENST00000395453 SUMO1P63165 101 aaKnown RBP9.18□□□□□ -0.94
SCAF11-203ENST00000395453 SH3BGRL3Q9H299 93 aa9.18□□□□□ -0.94
SCAF11-203ENST00000395453 C11orf21Q9P2W6 132 aa9.18□□□□□ -0.94
SCAF11-203ENST00000395453 EPDR1Q9UM22 224 aa9.18□□□□□ -0.94
SCAF11-203ENST00000395453 TRAV9-2A0A087WT02 112 aa9.17□□□□□ -0.94
SCAF11-203ENST00000395453 RNF222A6NCQ9 220 aa9.17□□□□□ -0.94
SCAF11-203ENST00000395453 GGTLC3B5MD39 225 aa9.17□□□□□ -0.94
SCAF11-203ENST00000395453 C9JCJ5 164 aa9.17□□□□□ -0.94
SCAF11-203ENST00000395453 CXorf1O96002 111 aa9.17□□□□□ -0.94
SCAF11-203ENST00000395453 GATA1P15976 413 aaPredicted RBP9.17□□□□□ -0.94
SCAF11-203ENST00000395453 NFE4Q86UQ8 179 aa9.17□□□□□ -0.94
SCAF11-203ENST00000395453 PCNPQ8WW12 178 aaKnown RBP9.17□□□□□ -0.94
SCAF11-203ENST00000395453 TXNDC17Q9BRA2 123 aa9.17□□□□□ -0.94
SCAF11-203ENST00000395453 NDFIP1Q9BT67 221 aa9.17□□□□□ -0.94
SCAF11-203ENST00000395453 ACTR3CQ9C0K3 210 aaPredicted RBP9.17□□□□□ -0.94
SCAF11-203ENST00000395453 TMEM167BQ9NRX6 74 aa9.17□□□□□ -0.94
SCAF11-203ENST00000395453 PSG8Q9UQ74 426 aa9.17□□□□□ -0.94
SCAF11-203ENST00000395453 LY96Q9Y6Y9 160 aa9.17□□□□□ -0.94
SCAF11-203ENST00000395453 VPS13BQ7Z7G8 4022 aa9.17□□□□□ -0.94
SCAF11-203ENST00000395453 K7EQM0 130 aa9.16□□□□□ -0.94
SCAF11-203ENST00000395453 TAAR5O14804 337 aa9.16□□□□□ -0.94
SCAF11-203ENST00000395453 DNAH10OSP0CZ25 163 aa9.16□□□□□ -0.94
SCAF11-203ENST00000395453 XGP55808 180 aa9.16□□□□□ -0.94
SCAF11-203ENST00000395453 TIRAPP58753 221 aa9.16□□□□□ -0.94
SCAF11-203ENST00000395453 FLI1Q01543 452 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms