RNA–Protein interactions for RNA: ENST00000394555.6

EFEMP1-202, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFEMP1, Length 3,024 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-202ENST00000394555 LGALS1P09382 135 aaKnown RBP12.6□□□□□ -0.39
EFEMP1-202ENST00000394555 ECSCRQ19T08 205 aa12.6□□□□□ -0.39
EFEMP1-202ENST00000394555 PTH2Q96A98 100 aa12.6□□□□□ -0.39
EFEMP1-202ENST00000394555 BUB3O43684 328 aa12.6□□□□□ -0.39
EFEMP1-202ENST00000394555 CD3EP07766 207 aa12.6□□□□□ -0.39
EFEMP1-202ENST00000394555 FOXI1Q12951 378 aa12.6□□□□□ -0.39
EFEMP1-202ENST00000394555 PIP4P1Q86T03 277 aa12.6□□□□□ -0.39
EFEMP1-202ENST00000394555 TRAV26-1A0A087WT03 109 aa12.59□□□□□ -0.39
EFEMP1-202ENST00000394555 ZNF672Q499Z4 452 aaPredicted RBP12.59□□□□□ -0.39
EFEMP1-202ENST00000394555 LINC01560Q8TB33 94 aa12.59□□□□□ -0.39
EFEMP1-202ENST00000394555 GLMPQ8WWB7 406 aa12.59□□□□□ -0.39
EFEMP1-202ENST00000394555 ZNF815PA8K554 130 aa12.59□□□□□ -0.39
EFEMP1-202ENST00000394555 ZFP2Q6ZN57 461 aa12.59□□□□□ -0.39
EFEMP1-202ENST00000394555 PRADC1Q9BSG0 188 aa12.59□□□□□ -0.39
EFEMP1-202ENST00000394555 SMIM2Q9BVW6 85 aa12.59□□□□□ -0.39
EFEMP1-202ENST00000394555 ANKHD1Q8IWZ3 2542 aaKnown RBP12.58□□□□□ -0.39
EFEMP1-202ENST00000394555 TGFAP01135 160 aa12.58□□□□□ -0.4
EFEMP1-202ENST00000394555 OR11H6Q8NGC7 330 aa12.58□□□□□ -0.4
EFEMP1-202ENST00000394555 SMCPP49901 116 aaPredicted RBP12.58□□□□□ -0.4
EFEMP1-202ENST00000394555 CLEC19AQ6UXS0 136 aa12.58□□□□□ -0.4
EFEMP1-202ENST00000394555 NFE4Q86UQ8 179 aa12.58□□□□□ -0.4
EFEMP1-202ENST00000394555 KLHL30-AS1Q8NEE0 82 aa12.58□□□□□ -0.4
EFEMP1-202ENST00000394555 PLEKHB2Q96CS7 222 aa12.58□□□□□ -0.4
EFEMP1-202ENST00000394555 RPL39LQ96EH5 51 aaKnown RBP12.58□□□□□ -0.4
EFEMP1-202ENST00000394555 EMP1P54849 157 aa12.57□□□□□ -0.4
EFEMP1-202ENST00000394555 DLX4Q92988 240 aaPredicted RBP12.57□□□□□ -0.4
EFEMP1-202ENST00000394555 GEMIN7Q9H840 131 aaKnown RBP12.57□□□□□ -0.4
EFEMP1-202ENST00000394555 IGF1P05019 195 aa12.57□□□□□ -0.4
EFEMP1-202ENST00000394555 SPINK8P0C7L1 97 aa12.57□□□□□ -0.4
EFEMP1-202ENST00000394555 SLC25A16P16260 332 aa12.57□□□□□ -0.4
EFEMP1-202ENST00000394555 C1QTNF4Q9BXJ3 329 aa12.57□□□□□ -0.4
EFEMP1-202ENST00000394555 MRAP2Q96G30 205 aa12.56□□□□□ -0.4
EFEMP1-202ENST00000394555 SPTA1P02549 2419 aa12.56□□□□□ -0.4
EFEMP1-202ENST00000394555 MGPP08493 103 aa12.56□□□□□ -0.4
EFEMP1-202ENST00000394555 C14orf178Q8N769 122 aaPredicted RBP12.56□□□□□ -0.4
EFEMP1-202ENST00000394555 MSRB2Q9Y3D2 182 aa12.56□□□□□ -0.4
EFEMP1-202ENST00000394555 IGHV7-81A0A0B4J1V7 117 aa12.56□□□□□ -0.4
EFEMP1-202ENST00000394555 TRAV12-1A0A0B4J245 112 aa12.56□□□□□ -0.4
EFEMP1-202ENST00000394555 MT-ATP8P03928 68 aa12.56□□□□□ -0.4
EFEMP1-202ENST00000394555 CFAP126Q5VTH2 177 aa12.56□□□□□ -0.4
EFEMP1-202ENST00000394555 C8orf86Q6ZUL3 223 aa12.56□□□□□ -0.4
EFEMP1-202ENST00000394555 SLC50A1Q9BRV3 221 aa12.56□□□□□ -0.4
EFEMP1-202ENST00000394555 TRAV8-2A0A0B4J237 113 aa12.55□□□□□ -0.4
EFEMP1-202ENST00000394555 RBAKDNA6NC62 111 aa12.55□□□□□ -0.4
EFEMP1-202ENST00000394555 LINC01548A6NM66 108 aa12.55□□□□□ -0.4
EFEMP1-202ENST00000394555 SUMO2P61956 95 aaKnown RBP12.55□□□□□ -0.4
EFEMP1-202ENST00000394555 NEXN-AS1Q8NBZ9 246 aa12.55□□□□□ -0.4
EFEMP1-202ENST00000394555 LY6G5BQ8NDX9 201 aa12.55□□□□□ -0.4
EFEMP1-202ENST00000394555 ZFAND3Q9H8U3 227 aa12.55□□□□□ -0.4
EFEMP1-202ENST00000394555 PRSS29PA6NIE9 313 aa12.55□□□□□ -0.4
EFEMP1-202ENST00000394555 CRYBA4P53673 196 aa12.55□□□□□ -0.4
EFEMP1-202ENST00000394555 PRR9Q5T870 116 aa12.55□□□□□ -0.4
EFEMP1-202ENST00000394555 C2orf66Q6UXQ4 117 aa12.55□□□□□ -0.4
EFEMP1-202ENST00000394555 CDIP1Q9H305 208 aa12.55□□□□□ -0.4
EFEMP1-202ENST00000394555 PRSS47A8MTI9 375 aa12.54□□□□□ -0.4
EFEMP1-202ENST00000394555 S100A4P26447 101 aaKnown RBP12.54□□□□□ -0.4
EFEMP1-202ENST00000394555 ORMDL2Q53FV1 153 aa12.54□□□□□ -0.4
EFEMP1-202ENST00000394555 PRR30Q53SZ7 412 aaPredicted RBP12.54□□□□□ -0.4
EFEMP1-202ENST00000394555 TSPAN13O95857 204 aa12.54□□□□□ -0.4
EFEMP1-202ENST00000394555 TCTEX1D4Q5JR98 221 aa12.54□□□□□ -0.4
EFEMP1-202ENST00000394555 VMO1Q7Z5L0 202 aa12.54□□□□□ -0.4
EFEMP1-202ENST00000394555 BAALCQ8WXS3 180 aa12.54□□□□□ -0.4
EFEMP1-202ENST00000394555 TOMM6Q96B49 74 aa12.54□□□□□ -0.4
EFEMP1-202ENST00000394555 TMEM238LA0A1B0GVL6 79 aa12.54□□□□□ -0.4
EFEMP1-202ENST00000394555 A6NJY4 79 aa12.54□□□□□ -0.4
EFEMP1-202ENST00000394555 FHL3Q13643 280 aa12.54□□□□□ -0.4
EFEMP1-202ENST00000394555 RASL10AQ92737 203 aa12.54□□□□□ -0.4
EFEMP1-202ENST00000394555 CLPSL1A2RUU4 121 aa12.53□□□□□ -0.4
EFEMP1-202ENST00000394555 DEFB1P60022 68 aa12.53□□□□□ -0.4
EFEMP1-202ENST00000394555 C16orf92Q96LL3 132 aa12.53□□□□□ -0.4
EFEMP1-202ENST00000394555 G3V318 75 aa12.52□□□□□ -0.4
EFEMP1-202ENST00000394555 PRTN3P24158 256 aa12.52□□□□□ -0.4
EFEMP1-202ENST00000394555 TLN1Q9Y490 2541 aaKnown RBP12.52□□□□□ -0.41
EFEMP1-202ENST00000394555 ODF3BA8MYP8 253 aa12.52□□□□□ -0.41
EFEMP1-202ENST00000394555 GRNP28799 593 aaKnown RBP12.51□□□□□ -0.41
EFEMP1-202ENST00000394555 XGP55808 180 aa12.51□□□□□ -0.41
EFEMP1-202ENST00000394555 ATP6V0E1O15342 81 aa12.51□□□□□ -0.41
EFEMP1-202ENST00000394555 METTL26Q96S19 204 aa12.51□□□□□ -0.41
EFEMP1-202ENST00000394555 PHLDA3Q9Y5J5 127 aa12.51□□□□□ -0.41
EFEMP1-202ENST00000394555 FAM90A27PA6NNH2 459 aa12.5□□□□□ -0.41
EFEMP1-202ENST00000394555 LINC01619G3V211 115 aa12.5□□□□□ -0.41
EFEMP1-202ENST00000394555 CCDC140Q96MF4 163 aa12.5□□□□□ -0.41
EFEMP1-202ENST00000394555 Q8N9W7 124 aa12.5□□□□□ -0.41
EFEMP1-202ENST00000394555 TIMD4Q96H15 378 aa12.5□□□□□ -0.41
EFEMP1-202ENST00000394555 IGHV4-4A0A075B6R2 117 aa12.49□□□□□ -0.41
EFEMP1-202ENST00000394555 Q6ZUT4 128 aa12.49□□□□□ -0.41
EFEMP1-202ENST00000394555 DUSP14O95147 198 aaKnown RBP12.49□□□□□ -0.41
EFEMP1-202ENST00000394555 SCGB1C2P0DMR2 95 aa12.49□□□□□ -0.41
EFEMP1-202ENST00000394555 C9orf47Q6ZRZ4 202 aa12.49□□□□□ -0.41
EFEMP1-202ENST00000394555 Q8N6K4 173 aa12.49□□□□□ -0.41
EFEMP1-202ENST00000394555 AKAP6Q13023 2319 aa12.49□□□□□ -0.41
EFEMP1-202ENST00000394555 ZFHX2Q9C0A1 2572 aaPredicted RBP12.49□□□□□ -0.41
EFEMP1-202ENST00000394555 UBE2D1P51668 147 aa12.48□□□□□ -0.41
EFEMP1-202ENST00000394555 CARD19Q96LW7 228 aa12.48□□□□□ -0.41
EFEMP1-202ENST00000394555 TCL1BO95988 128 aa12.48□□□□□ -0.41
EFEMP1-202ENST00000394555 ARL3P36405 182 aa12.48□□□□□ -0.41
EFEMP1-202ENST00000394555 Q8NA96 180 aa12.48□□□□□ -0.41
EFEMP1-202ENST00000394555 ATP6V0E2Q8NHE4 81 aa12.48□□□□□ -0.41
EFEMP1-202ENST00000394555 DPH3P1Q9H4G8 78 aa12.48□□□□□ -0.41
EFEMP1-202ENST00000394555 C11orf86A6NJI1 115 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms