RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 COX6B1P14854 86 aa14.55□□□□□ -0.08
HOXC6-202ENST00000394331 SLC25A16P16260 332 aa14.55□□□□□ -0.08
HOXC6-202ENST00000394331 DTX2Q86UW9 622 aa14.55□□□□□ -0.08
HOXC6-202ENST00000394331 TEX22C9J3V5 150 aa14.55□□□□□ -0.08
HOXC6-202ENST00000394331 APELAP0DMC3 54 aa14.55□□□□□ -0.08
HOXC6-202ENST00000394331 OR10J6PQ8NGY7 276 aa14.55□□□□□ -0.08
HOXC6-202ENST00000394331 PCNX1Q96RV3 2341 aa14.55□□□□□ -0.08
HOXC6-202ENST00000394331 LYNX1G3V0Z9 82 aa14.55□□□□□ -0.08
HOXC6-202ENST00000394331 LYNX1P0DP58 116 aa14.55□□□□□ -0.08
HOXC6-202ENST00000394331 ZNF672Q499Z4 452 aaPredicted RBP14.55□□□□□ -0.08
HOXC6-202ENST00000394331 NRACQ8N912 160 aa14.55□□□□□ -0.08
HOXC6-202ENST00000394331 IGHV3-21A0A0B4J1V1 117 aa14.54□□□□□ -0.08
HOXC6-202ENST00000394331 COX7A1P24310 79 aa14.54□□□□□ -0.08
HOXC6-202ENST00000394331 DLX1P56177 255 aa14.54□□□□□ -0.08
HOXC6-202ENST00000394331 FOXC1Q12948 553 aa14.54□□□□□ -0.08
HOXC6-202ENST00000394331 MRPL23Q16540 153 aaKnown RBP14.54□□□□□ -0.08
HOXC6-202ENST00000394331 ARFGEF3Q5TH69 2177 aa14.54□□□□□ -0.08
HOXC6-202ENST00000394331 ZFHX2Q9C0A1 2572 aaPredicted RBP14.54□□□□□ -0.08
HOXC6-202ENST00000394331 LINC01560Q8TB33 94 aa14.54□□□□□ -0.08
HOXC6-202ENST00000394331 SRSF8Q9BRL6 282 aaKnown RBP14.54□□□□□ -0.08
HOXC6-202ENST00000394331 SLC25A20O43772 301 aa14.53□□□□□ -0.08
HOXC6-202ENST00000394331 C10orf126Q8N4M7 172 aa14.53□□□□□ -0.08
HOXC6-202ENST00000394331 PRADC1Q9BSG0 188 aa14.53□□□□□ -0.08
HOXC6-202ENST00000394331 YAE1D1Q9NRH1 226 aa14.53□□□□□ -0.08
HOXC6-202ENST00000394331 TRAV8-2A0A0B4J237 113 aa14.53□□□□□ -0.08
HOXC6-202ENST00000394331 ZNF815PA8K554 130 aa14.53□□□□□ -0.08
HOXC6-202ENST00000394331 SRSF9Q13242 221 aaKnown RBP eCLIP14.53□□□□□ -0.08
HOXC6-202ENST00000394331 NEXN-AS1Q8NBZ9 246 aa14.53□□□□□ -0.08
HOXC6-202ENST00000394331 GATA1P15976 413 aaPredicted RBP14.52□□□□□ -0.08
HOXC6-202ENST00000394331 ZNF80P51504 273 aaPredicted RBP14.52□□□□□ -0.08
HOXC6-202ENST00000394331 FAM159AQ6UWV7 190 aa14.52□□□□□ -0.08
HOXC6-202ENST00000394331 ZNF491Q8N8L2 437 aa14.52□□□□□ -0.08
HOXC6-202ENST00000394331 PRTN3P24158 256 aa14.52□□□□□ -0.09
HOXC6-202ENST00000394331 PRB3Q04118 309 aaPredicted RBP14.52□□□□□ -0.09
HOXC6-202ENST00000394331 FBXL19-AS1Q494R0 122 aa14.52□□□□□ -0.09
HOXC6-202ENST00000394331 RNF125Q96EQ8 232 aa14.52□□□□□ -0.09
HOXC6-202ENST00000394331 H3BVH4 76 aa14.52□□□□□ -0.09
HOXC6-202ENST00000394331 VPREB3Q9UKI3 123 aa14.52□□□□□ -0.09
HOXC6-202ENST00000394331 ANKRD11Q6UB99 2663 aaPredicted RBP14.51□□□□□ -0.09
HOXC6-202ENST00000394331 LY6LH3BQJ8 138 aa14.51□□□□□ -0.09
HOXC6-202ENST00000394331 CRLF1O75462 422 aa14.51□□□□□ -0.09
HOXC6-202ENST00000394331 RPL13AP40429 203 aaKnown RBP14.51□□□□□ -0.09
HOXC6-202ENST00000394331 SCGB1D4Q6XE38 83 aa14.51□□□□□ -0.09
HOXC6-202ENST00000394331 RASL10AQ92737 203 aa14.51□□□□□ -0.09
HOXC6-202ENST00000394331 AKAP13Q12802 2813 aa14.51□□□□□ -0.09
HOXC6-202ENST00000394331 APC2O95996 2303 aa14.51□□□□□ -0.09
HOXC6-202ENST00000394331 HLA-DMBP28068 263 aa14.5□□□□□ -0.09
HOXC6-202ENST00000394331 ANXA2RQ3ZCQ2 193 aa14.5□□□□□ -0.09
HOXC6-202ENST00000394331 TOMM6Q96B49 74 aa14.5□□□□□ -0.09
HOXC6-202ENST00000394331 PLXNB1O43157 2135 aa14.49□□□□□ -0.09
HOXC6-202ENST00000394331 ONECUT1Q9UBC0 465 aa14.49□□□□□ -0.09
HOXC6-202ENST00000394331 GVINP1Q7Z2Y8 2422 aa14.49□□□□□ -0.09
HOXC6-202ENST00000394331 MALRD1Q5VYJ5 2156 aa14.49□□□□□ -0.09
HOXC6-202ENST00000394331 IGKV2-40A0A087WW87 121 aaPredicted RBP14.49□□□□□ -0.09
HOXC6-202ENST00000394331 IGKV2D-40P01614 121 aaPredicted RBP14.49□□□□□ -0.09
HOXC6-202ENST00000394331 EFNA4P52798 201 aa14.49□□□□□ -0.09
HOXC6-202ENST00000394331 ORMDL2Q53FV1 153 aa14.49□□□□□ -0.09
HOXC6-202ENST00000394331 LY6G5BQ8NDX9 201 aa14.49□□□□□ -0.09
HOXC6-202ENST00000394331 PLEKHB2Q96CS7 222 aa14.49□□□□□ -0.09
HOXC6-202ENST00000394331 SFTA2Q6UW10 78 aa14.48□□□□□ -0.09
HOXC6-202ENST00000394331 CFC1BP0CG36 223 aa14.48□□□□□ -0.09
HOXC6-202ENST00000394331 CFC1P0CG37 223 aa14.48□□□□□ -0.09
HOXC6-202ENST00000394331 MEIG1Q5JSS6 88 aa14.48□□□□□ -0.09
HOXC6-202ENST00000394331 ODF3Q96PU9 254 aa14.48□□□□□ -0.09
HOXC6-202ENST00000394331 ORM1P02763 201 aa14.48□□□□□ -0.09
HOXC6-202ENST00000394331 PRO1854Q9UHT4 67 aa14.48□□□□□ -0.09
HOXC6-202ENST00000394331 A0A0J9YY99 117 aa14.47□□□□□ -0.09
HOXC6-202ENST00000394331 TIMM23O14925 209 aa14.47□□□□□ -0.09
HOXC6-202ENST00000394331 P0DMU3 169 aa14.47□□□□□ -0.09
HOXC6-202ENST00000394331 FAM231AP0DMU4 169 aa14.47□□□□□ -0.09
HOXC6-202ENST00000394331 FAM231CP0DMU5 169 aa14.47□□□□□ -0.09
HOXC6-202ENST00000394331 LY6DQ14210 128 aa14.47□□□□□ -0.09
HOXC6-202ENST00000394331 RAB1BQ9H0U4 201 aa14.47□□□□□ -0.09
HOXC6-202ENST00000394331 DPM3Q9P2X0 92 aa14.47□□□□□ -0.09
HOXC6-202ENST00000394331 IGHV3-30P01768 117 aa14.46□□□□□ -0.09
HOXC6-202ENST00000394331 IGHV3-30-5P0DP03 117 aa14.46□□□□□ -0.09
HOXC6-202ENST00000394331 ERCC8Q13216 396 aa14.46□□□□□ -0.09
HOXC6-202ENST00000394331 Q8N1Y9 231 aa14.46□□□□□ -0.09
HOXC6-202ENST00000394331 TIMD4Q96H15 378 aa14.46□□□□□ -0.09
HOXC6-202ENST00000394331 SCGB3A1Q96QR1 104 aa14.46□□□□□ -0.09
HOXC6-202ENST00000394331 SMIM2Q9BVW6 85 aa14.46□□□□□ -0.09
HOXC6-202ENST00000394331 POLEQ07864 2286 aa14.45□□□□□ -0.1
HOXC6-202ENST00000394331 IGHV4-4A0A075B6R2 117 aa14.45□□□□□ -0.1
HOXC6-202ENST00000394331 C9JAW5 83 aa14.45□□□□□ -0.1
HOXC6-202ENST00000394331 K7EIM0 57 aa14.45□□□□□ -0.1
HOXC6-202ENST00000394331 TRAV8-4A0A0B4J246 113 aa14.45□□□□□ -0.1
HOXC6-202ENST00000394331 NBR2O15453 112 aa14.45□□□□□ -0.1
HOXC6-202ENST00000394331 CCL21O00585 134 aa14.44□□□□□ -0.1
HOXC6-202ENST00000394331 GRNP28799 593 aaKnown RBP14.44□□□□□ -0.1
HOXC6-202ENST00000394331 J3KRW8 73 aa14.44□□□□□ -0.1
HOXC6-202ENST00000394331 C15orf53Q8NAA6 179 aa14.44□□□□□ -0.1
HOXC6-202ENST00000394331 LAMA5O15230 3695 aa14.44□□□□□ -0.1
HOXC6-202ENST00000394331 Q8TAT8 98 aa14.43□□□□□ -0.1
HOXC6-202ENST00000394331 RPL7P18124 248 aaKnown RBP14.43□□□□□ -0.1
HOXC6-202ENST00000394331 PAPPA-AS1Q5QFB9 102 aa14.43□□□□□ -0.1
HOXC6-202ENST00000394331 SLC25A29Q8N8R3 303 aa14.43□□□□□ -0.1
HOXC6-202ENST00000394331 NPBQ8NG41 125 aa14.43□□□□□ -0.1
HOXC6-202ENST00000394331 BAALCQ8WXS3 180 aa14.43□□□□□ -0.1
HOXC6-202ENST00000394331 PRB4P10163 310 aaPredicted RBP14.42□□□□□ -0.1
HOXC6-202ENST00000394331 Q6ZQT7 251 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms