RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 DCANP1Q8TF63 244 aa6.83□□□□□ -1.32
TDP1-202ENST00000393452 MAP1LC3CQ9BXW4 147 aa6.83□□□□□ -1.32
TDP1-202ENST00000393452 ZNF702PQ9H963 129 aa6.83□□□□□ -1.32
TDP1-202ENST00000393452 HELZ2Q9BYK8 2649 aaKnown RBP6.83□□□□□ -1.32
TDP1-202ENST00000393452 LINC01546A6NGU7 62 aa6.83□□□□□ -1.32
TDP1-202ENST00000393452 OR4C46A6NHA9 309 aa6.83□□□□□ -1.32
TDP1-202ENST00000393452 TCF21O43680 179 aa6.83□□□□□ -1.32
TDP1-202ENST00000393452 IGLL1P15814 213 aa6.83□□□□□ -1.32
TDP1-202ENST00000393452 RPL11P62913 178 aaKnown RBP6.83□□□□□ -1.32
TDP1-202ENST00000393452 UFC1Q9Y3C8 167 aa6.83□□□□□ -1.32
TDP1-202ENST00000393452 NBPF19A0A087WUL8 3843 aa6.83□□□□□ -1.32
TDP1-202ENST00000393452 LOC389332A0A1B0GUA5 103 aa6.82□□□□□ -1.32
TDP1-202ENST00000393452 SMKR1H3BMG3 65 aa6.82□□□□□ -1.32
TDP1-202ENST00000393452 RPLP1P05386 114 aaKnown RBP6.82□□□□□ -1.32
TDP1-202ENST00000393452 ELANEP08246 267 aa6.82□□□□□ -1.32
TDP1-202ENST00000393452 EDN2P20800 178 aa6.82□□□□□ -1.32
TDP1-202ENST00000393452 DEFB1P60022 68 aa6.82□□□□□ -1.32
TDP1-202ENST00000393452 LINC01545Q5VT33 79 aa6.82□□□□□ -1.32
TDP1-202ENST00000393452 RNF152Q8N8N0 203 aa6.82□□□□□ -1.32
TDP1-202ENST00000393452 TRAV21A0A0B4J279 112 aa6.82□□□□□ -1.32
TDP1-202ENST00000393452 NCR2O95944 276 aa6.82□□□□□ -1.32
TDP1-202ENST00000393452 CACNG7P62955 275 aa6.82□□□□□ -1.32
TDP1-202ENST00000393452 Q96MF0 132 aa6.82□□□□□ -1.32
TDP1-202ENST00000393452 FASNP49327 2511 aaKnown RBP6.81□□□□□ -1.32
TDP1-202ENST00000393452 F6UB75 175 aa6.81□□□□□ -1.32
TDP1-202ENST00000393452 HOXA3O43365 443 aaPredicted RBP6.81□□□□□ -1.32
TDP1-202ENST00000393452 GAS8-AS1O95177 125 aa6.81□□□□□ -1.32
TDP1-202ENST00000393452 LGALS1P09382 135 aaKnown RBP6.81□□□□□ -1.32
TDP1-202ENST00000393452 EVI2AP22794 236 aa6.81□□□□□ -1.32
TDP1-202ENST00000393452 HIST2H2BCQ6DN03 193 aa6.81□□□□□ -1.32
TDP1-202ENST00000393452 UBE2E2Q96LR5 201 aa6.81□□□□□ -1.32
TDP1-202ENST00000393452 IGKV3-7A0A075B6H7 116 aa6.81□□□□□ -1.32
TDP1-202ENST00000393452 LGALS9O00182 355 aa6.81□□□□□ -1.32
TDP1-202ENST00000393452 Q8N2B8 174 aa6.81□□□□□ -1.32
TDP1-202ENST00000393452 DEFB125Q8N687 156 aa6.81□□□□□ -1.32
TDP1-202ENST00000393452 MAP1LC3AQ9H492 121 aa6.81□□□□□ -1.32
TDP1-202ENST00000393452 ST20Q9HBF5 79 aa6.81□□□□□ -1.32
TDP1-202ENST00000393452 KLLNB2CW77 178 aa6.8□□□□□ -1.32
TDP1-202ENST00000393452 H3BVH4 76 aa6.8□□□□□ -1.32
TDP1-202ENST00000393452 TNFRSF6BO95407 300 aa6.8□□□□□ -1.32
TDP1-202ENST00000393452 HBDP02042 147 aa6.8□□□□□ -1.32
TDP1-202ENST00000393452 SRD5A1P18405 259 aa6.8□□□□□ -1.32
TDP1-202ENST00000393452 ID1P41134 155 aa6.8□□□□□ -1.32
TDP1-202ENST00000393452 MED14OSP0DP75 135 aa6.8□□□□□ -1.32
TDP1-202ENST00000393452 ZNF25P17030 456 aaPredicted RBP6.8□□□□□ -1.32
TDP1-202ENST00000393452 TSPOP30536 169 aa6.8□□□□□ -1.32
TDP1-202ENST00000393452 SPANXN1Q5VSR9 72 aa6.8□□□□□ -1.32
TDP1-202ENST00000393452 Q6ZN92 141 aa6.8□□□□□ -1.32
TDP1-202ENST00000393452 NXT2Q9NPJ8 142 aaKnown RBP6.8□□□□□ -1.32
TDP1-202ENST00000393452 SCRT2Q9NQ03 307 aa6.8□□□□□ -1.32
TDP1-202ENST00000393452 TEX15Q9BXT5 2789 aa6.79□□□□□ -1.32
TDP1-202ENST00000393452 MXRA5Q9NR99 2828 aa6.79□□□□□ -1.32
TDP1-202ENST00000393452 J3KRW8 73 aa6.79□□□□□ -1.32
TDP1-202ENST00000393452 KIR3DS1Q14943 382 aa6.79□□□□□ -1.32
TDP1-202ENST00000393452 ANXA2RQ3ZCQ2 193 aa6.79□□□□□ -1.32
TDP1-202ENST00000393452 SMIM15Q7Z3B0 74 aa6.79□□□□□ -1.32
TDP1-202ENST00000393452 MS4A6AQ9H2W1 248 aa6.79□□□□□ -1.32
TDP1-202ENST00000393452 MRPS16Q9Y3D3 137 aaKnown RBP6.79□□□□□ -1.32
TDP1-202ENST00000393452 APCP25054 2843 aa6.79□□□□□ -1.32
TDP1-202ENST00000393452 IGLV2-18A0A075B6J9 118 aa6.79□□□□□ -1.32
TDP1-202ENST00000393452 IGHV4OR15-8A0A075B7B6 117 aa6.79□□□□□ -1.32
TDP1-202ENST00000393452 A0A087WW49 117 aa6.79□□□□□ -1.32
TDP1-202ENST00000393452 hDV102S1A0JD36 115 aa6.79□□□□□ -1.32
TDP1-202ENST00000393452 GATA1P15976 413 aaPredicted RBP6.79□□□□□ -1.32
TDP1-202ENST00000393452 RNASE4P34096 147 aaKnown RBP6.79□□□□□ -1.32
TDP1-202ENST00000393452 HNRNPA3P51991 378 aaKnown RBP6.79□□□□□ -1.32
TDP1-202ENST00000393452 NRACQ8N912 160 aa6.79□□□□□ -1.32
TDP1-202ENST00000393452 MCRIP2Q9BUT9 160 aaKnown RBP6.79□□□□□ -1.32
TDP1-202ENST00000393452 TIMM8BQ9Y5J9 83 aaPredicted RBP6.79□□□□□ -1.32
TDP1-202ENST00000393452 SELENOKQ9Y6D0 94 aa6.79□□□□□ -1.32
TDP1-202ENST00000393452 SORL1Q92673 2214 aa6.78□□□□□ -1.32
TDP1-202ENST00000393452 K7EQG2 157 aa6.78□□□□□ -1.32
TDP1-202ENST00000393452 HOXD3P31249 432 aaPredicted RBP6.78□□□□□ -1.32
TDP1-202ENST00000393452 ASIPP42127 132 aa6.78□□□□□ -1.32
TDP1-202ENST00000393452 SYNJ2BPP57105 145 aa6.78□□□□□ -1.32
TDP1-202ENST00000393452 OR2K2Q8NGT1 345 aa6.78□□□□□ -1.32
TDP1-202ENST00000393452 ODF3Q96PU9 254 aa6.78□□□□□ -1.32
TDP1-202ENST00000393452 TMEM208Q9BTX3 173 aa6.78□□□□□ -1.32
TDP1-202ENST00000393452 TLN2Q9Y4G6 2542 aa6.78□□□□□ -1.32
TDP1-202ENST00000393452 MUC4Q99102 2169 aa6.78□□□□□ -1.32
TDP1-202ENST00000393452 DLEU1O43261 78 aa6.77□□□□□ -1.32
TDP1-202ENST00000393452 RNASE3P12724 160 aaKnown RBP6.77□□□□□ -1.32
TDP1-202ENST00000393452 PCP4P48539 62 aa6.77□□□□□ -1.32
TDP1-202ENST00000393452 FXYD7P58549 80 aa6.77□□□□□ -1.32
TDP1-202ENST00000393452 LGALS9BQ3B8N2 356 aa6.77□□□□□ -1.32
TDP1-202ENST00000393452 LGALS9CQ6DKI2 356 aa6.77□□□□□ -1.32
TDP1-202ENST00000393452 Q8N8P6 123 aa6.77□□□□□ -1.32
TDP1-202ENST00000393452 MRAP2Q96G30 205 aa6.77□□□□□ -1.32
TDP1-202ENST00000393452 HSBP1L1C9JCN9 74 aa6.77□□□□□ -1.33
TDP1-202ENST00000393452 H0Y8G0 127 aa6.77□□□□□ -1.33
TDP1-202ENST00000393452 NPSP0C0P6 89 aa6.77□□□□□ -1.33
TDP1-202ENST00000393452 FCER1GP30273 86 aa6.77□□□□□ -1.33
TDP1-202ENST00000393452 WFDC3Q8IUB2 231 aa6.77□□□□□ -1.33
TDP1-202ENST00000393452 IFI27L1Q96BM0 104 aa6.77□□□□□ -1.33
TDP1-202ENST00000393452 PMCHL2Q9BQD1 86 aa6.77□□□□□ -1.33
TDP1-202ENST00000393452 AGRNO00468 2067 aa6.77□□□□□ -1.33
TDP1-202ENST00000393452 A0A0J9YX75 114 aa6.76□□□□□ -1.33
TDP1-202ENST00000393452 NXPH4O95158 308 aa6.76□□□□□ -1.33
TDP1-202ENST00000393452 S100A4P26447 101 aaKnown RBP6.76□□□□□ -1.33
TDP1-202ENST00000393452 SNRPD3P62318 126 aaKnown RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms