RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 CRXO43186 299 aaPredicted RBP11.3□□□□□ -0.6
MKS1-202ENST00000393119 SH2D1AO60880 128 aa11.3□□□□□ -0.6
MKS1-202ENST00000393119 CD28P10747 220 aa11.3□□□□□ -0.6
MKS1-202ENST00000393119 KIR3DS1Q14943 382 aa11.3□□□□□ -0.6
MKS1-202ENST00000393119 ZNF575Q86XF7 245 aa11.3□□□□□ -0.6
MKS1-202ENST00000393119 SORL1Q92673 2214 aa11.3□□□□□ -0.6
MKS1-202ENST00000393119 INAFM1C9JVW0 142 aa11.3□□□□□ -0.6
MKS1-202ENST00000393119 TAX1BP3O14907 124 aa11.3□□□□□ -0.6
MKS1-202ENST00000393119 OR4C5Q8NGB2 326 aa11.3□□□□□ -0.6
MKS1-202ENST00000393119 SLC50A1Q9BRV3 221 aa11.3□□□□□ -0.6
MKS1-202ENST00000393119 ZNF492Q9P255 531 aa11.3□□□□□ -0.6
MKS1-202ENST00000393119 TMEM89A2RUT3 159 aa11.29□□□□□ -0.6
MKS1-202ENST00000393119 RNF152Q8N8N0 203 aa11.29□□□□□ -0.6
MKS1-202ENST00000393119 URB1-AS1Q96HZ7 61 aa11.29□□□□□ -0.6
MKS1-202ENST00000393119 TRBV6-1A0A0K0K1D8 114 aa11.28□□□□□ -0.6
MKS1-202ENST00000393119 NPIPB6E9PJ23 425 aa11.28□□□□□ -0.6
MKS1-202ENST00000393119 NTF3P20783 257 aa11.28□□□□□ -0.6
MKS1-202ENST00000393119 S100A7P31151 101 aa11.28□□□□□ -0.6
MKS1-202ENST00000393119 PRR9Q5T870 116 aa11.28□□□□□ -0.6
MKS1-202ENST00000393119 TMEM86BQ8N661 226 aa11.28□□□□□ -0.6
MKS1-202ENST00000393119 KLHL30-AS1Q8NEE0 82 aa11.28□□□□□ -0.6
MKS1-202ENST00000393119 SMIM12Q96EX1 92 aa11.28□□□□□ -0.6
MKS1-202ENST00000393119 RNF151Q2KHN1 245 aa11.28□□□□□ -0.6
MKS1-202ENST00000393119 M0QZ24 198 aa11.27□□□□□ -0.6
MKS1-202ENST00000393119 LINC01006Q8NI28 216 aa11.27□□□□□ -0.6
MKS1-202ENST00000393119 CST9LQ9H4G1 147 aa11.27□□□□□ -0.6
MKS1-202ENST00000393119 C11orf21Q9P2W6 132 aa11.27□□□□□ -0.6
MKS1-202ENST00000393119 DEFB125Q8N687 156 aa11.27□□□□□ -0.61
MKS1-202ENST00000393119 ST20Q9HBF5 79 aa11.27□□□□□ -0.61
MKS1-202ENST00000393119 NSD1Q96L73 2696 aaPredicted RBP11.27□□□□□ -0.61
MKS1-202ENST00000393119 FOXA3P55318 350 aaPredicted RBP11.26□□□□□ -0.61
MKS1-202ENST00000393119 OCIAD2Q56VL3 154 aa11.26□□□□□ -0.61
MKS1-202ENST00000393119 DLX4Q92988 240 aaPredicted RBP11.26□□□□□ -0.61
MKS1-202ENST00000393119 A8MWL6 223 aa11.26□□□□□ -0.61
MKS1-202ENST00000393119 K7EMT4 169 aa11.26□□□□□ -0.61
MKS1-202ENST00000393119 SPRY2O43597 315 aa11.26□□□□□ -0.61
MKS1-202ENST00000393119 BVES-AS1Q5T3Y7 98 aa11.26□□□□□ -0.61
MKS1-202ENST00000393119 DCANP1Q8TF63 244 aa11.26□□□□□ -0.61
MKS1-202ENST00000393119 CITED2Q99967 270 aaPredicted RBP11.26□□□□□ -0.61
MKS1-202ENST00000393119 MS4A6AQ9H2W1 248 aa11.26□□□□□ -0.61
MKS1-202ENST00000393119 UFC1Q9Y3C8 167 aa11.26□□□□□ -0.61
MKS1-202ENST00000393119 A0A1B0GXF2 115 aa11.25□□□□□ -0.61
MKS1-202ENST00000393119 HSBP1O75506 76 aa11.25□□□□□ -0.61
MKS1-202ENST00000393119 ARMS2P0C7Q2 107 aa11.25□□□□□ -0.61
MKS1-202ENST00000393119 ZNF688P0C7X2 276 aa11.25□□□□□ -0.61
MKS1-202ENST00000393119 CT45A10P0DMU9 189 aa11.25□□□□□ -0.61
MKS1-202ENST00000393119 M0R2Z0 102 aa11.25□□□□□ -0.61
MKS1-202ENST00000393119 HIST1H1AQ02539 215 aaPredicted RBP11.25□□□□□ -0.61
MKS1-202ENST00000393119 MPV17L2Q567V2 206 aa11.25□□□□□ -0.61
MKS1-202ENST00000393119 FAM162BQ5T6X4 162 aa11.25□□□□□ -0.61
MKS1-202ENST00000393119 OR1N2Q8NGR9 330 aa11.25□□□□□ -0.61
MKS1-202ENST00000393119 TP73-AS1Q9UF72 201 aa11.25□□□□□ -0.61
MKS1-202ENST00000393119 IGKV3-20P01619 116 aa11.24□□□□□ -0.61
MKS1-202ENST00000393119 RNASE1P07998 156 aaKnown RBP11.24□□□□□ -0.61
MKS1-202ENST00000393119 SMIM15Q7Z3B0 74 aa11.24□□□□□ -0.61
MKS1-202ENST00000393119 TEX29Q8N6K0 151 aa11.24□□□□□ -0.61
MKS1-202ENST00000393119 SERTM2A0A1B0GWG4 89 aa11.24□□□□□ -0.61
MKS1-202ENST00000393119 ORM1P02763 201 aa11.24□□□□□ -0.61
MKS1-202ENST00000393119 ZNF138P52744 262 aa11.24□□□□□ -0.61
MKS1-202ENST00000393119 TMEM78Q5T7P6 136 aa11.24□□□□□ -0.61
MKS1-202ENST00000393119 RAX2Q96IS3 184 aa11.24□□□□□ -0.61
MKS1-202ENST00000393119 TMEM70Q9BUB7 260 aa11.24□□□□□ -0.61
MKS1-202ENST00000393119 TMEM189A5PLL7 270 aa11.23□□□□□ -0.61
MKS1-202ENST00000393119 LINC01619G3V211 115 aa11.23□□□□□ -0.61
MKS1-202ENST00000393119 HILS1P60008 231 aa11.23□□□□□ -0.61
MKS1-202ENST00000393119 VAMP3Q15836 100 aa11.23□□□□□ -0.61
MKS1-202ENST00000393119 C4orf3Q8WVX3 66 aa11.23□□□□□ -0.61
MKS1-202ENST00000393119 DPF1Q92782 380 aa11.23□□□□□ -0.61
MKS1-202ENST00000393119 CLEC5AQ9NY25 188 aa11.23□□□□□ -0.61
MKS1-202ENST00000393119 PSMG4Q5JS54 123 aa11.22□□□□□ -0.61
MKS1-202ENST00000393119 LYZL1Q6UWQ5 148 aa11.22□□□□□ -0.61
MKS1-202ENST00000393119 RBPMS2Q6ZRY4 209 aaKnown RBP11.22□□□□□ -0.61
MKS1-202ENST00000393119 C9orf47Q6ZRZ4 202 aa11.22□□□□□ -0.61
MKS1-202ENST00000393119 ATP5L2Q7Z4Y8 100 aa11.22□□□□□ -0.61
MKS1-202ENST00000393119 ZNF418Q8TF45 676 aaPredicted RBP11.22□□□□□ -0.61
MKS1-202ENST00000393119 CSTL1Q9H114 145 aa11.22□□□□□ -0.61
MKS1-202ENST00000393119 IGKV3D-20A0A0C4DH25 116 aa11.21□□□□□ -0.61
MKS1-202ENST00000393119 RBAKDNA6NC62 111 aa11.21□□□□□ -0.61
MKS1-202ENST00000393119 OR4C46A6NHA9 309 aa11.21□□□□□ -0.61
MKS1-202ENST00000393119 CBY3A6NI87 242 aa11.21□□□□□ -0.61
MKS1-202ENST00000393119 CT83Q5H943 113 aa11.21□□□□□ -0.61
MKS1-202ENST00000393119 VPS25Q9BRG1 176 aa11.21□□□□□ -0.61
MKS1-202ENST00000393119 AGRNO00468 2067 aa11.21□□□□□ -0.61
MKS1-202ENST00000393119 OR8A1Q8NGG7 326 aa11.21□□□□□ -0.62
MKS1-202ENST00000393119 SCRT2Q9NQ03 307 aa11.21□□□□□ -0.62
MKS1-202ENST00000393119 MSRB1Q9NZV6 116 aa11.21□□□□□ -0.62
MKS1-202ENST00000393119 SYS1-DBNDD2H3BUS1 97 aa11.2□□□□□ -0.62
MKS1-202ENST00000393119 LGALS9O00182 355 aa11.2□□□□□ -0.62
MKS1-202ENST00000393119 KRTAP10-3P60369 221 aa11.2□□□□□ -0.62
MKS1-202ENST00000393119 RNASEKQ6P5S7 137 aaKnown RBP11.2□□□□□ -0.62
MKS1-202ENST00000393119 COX8CQ7Z4L0 72 aa11.2□□□□□ -0.62
MKS1-202ENST00000393119 NDFIP1Q9BT67 221 aa11.2□□□□□ -0.62
MKS1-202ENST00000393119 TENM1Q9UKZ4 2725 aa11.2□□□□□ -0.62
MKS1-202ENST00000393119 JMJD1CQ15652 2540 aa11.2□□□□□ -0.62
MKS1-202ENST00000393119 NUDT3O95989 172 aa11.2□□□□□ -0.62
MKS1-202ENST00000393119 C2CD3Q4AC94 2353 aa11.2□□□□□ -0.62
MKS1-202ENST00000393119 CYSRT1A8MQ03 144 aa11.19□□□□□ -0.62
MKS1-202ENST00000393119 FABP5P3A8MUU1 101 aa11.19□□□□□ -0.62
MKS1-202ENST00000393119 HBBP68871 147 aa11.19□□□□□ -0.62
MKS1-202ENST00000393119 C12orf54Q6X4T0 127 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms