RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 TMEM219Q86XT9 240 aa8.41□□□□□ -1.06
BRF1-204ENST00000392557 CHAC1Q9BUX1 264 aa8.41□□□□□ -1.06
BRF1-204ENST00000392557 ATP5J2P56134 94 aa8.4□□□□□ -1.06
BRF1-204ENST00000392557 PAX2Q02962 417 aa8.4□□□□□ -1.06
BRF1-204ENST00000392557 FANCD2OSQ96PS1 177 aa8.4□□□□□ -1.06
BRF1-204ENST00000392557 RNF5Q99942 180 aa8.4□□□□□ -1.06
BRF1-204ENST00000392557 SPXQ9BT56 116 aa8.4□□□□□ -1.06
BRF1-204ENST00000392557 WI2-2373I1.2A0A1W2PRP0 233 aa8.4□□□□□ -1.07
BRF1-204ENST00000392557 M0R381 172 aa8.4□□□□□ -1.07
BRF1-204ENST00000392557 DPM2O94777 84 aa8.4□□□□□ -1.07
BRF1-204ENST00000392557 PIP4P2Q8N4L2 257 aa8.4□□□□□ -1.07
BRF1-204ENST00000392557 NF1P21359 2839 aa8.39□□□□□ -1.07
BRF1-204ENST00000392557 FBN2P35556 2912 aa8.39□□□□□ -1.07
BRF1-204ENST00000392557 SMIM17P0DL12 118 aa8.39□□□□□ -1.07
BRF1-204ENST00000392557 LMO4P61968 165 aa8.39□□□□□ -1.07
BRF1-204ENST00000392557 SIRPDQ9H106 197 aa8.39□□□□□ -1.07
BRF1-204ENST00000392557 NXT2Q9NPJ8 142 aaKnown RBP8.39□□□□□ -1.07
BRF1-204ENST00000392557 ZNF562Q6V9R5 426 aa8.39□□□□□ -1.07
BRF1-204ENST00000392557 ARL3P36405 182 aa8.38□□□□□ -1.07
BRF1-204ENST00000392557 DPF1Q92782 380 aa8.38□□□□□ -1.07
BRF1-204ENST00000392557 GTSF1LQ9H1H1 148 aa8.38□□□□□ -1.07
BRF1-204ENST00000392557 MRPL35Q9NZE8 188 aaKnown RBP8.38□□□□□ -1.07
BRF1-204ENST00000392557 IGLV11-55A0A075B6I3 123 aa8.38□□□□□ -1.07
BRF1-204ENST00000392557 TRBV6-1A0A0K0K1D8 114 aa8.38□□□□□ -1.07
BRF1-204ENST00000392557 TRGV3P03979 118 aa8.38□□□□□ -1.07
BRF1-204ENST00000392557 CTSGP08311 255 aa8.38□□□□□ -1.07
BRF1-204ENST00000392557 MGPP08493 103 aa8.38□□□□□ -1.07
BRF1-204ENST00000392557 OR5A1Q8NGJ0 315 aa8.38□□□□□ -1.07
BRF1-204ENST00000392557 HIVEP2P31629 2446 aa8.38□□□□□ -1.07
BRF1-204ENST00000392557 IGHV4-61A0A0C4DH41 118 aa8.38□□□□□ -1.07
BRF1-204ENST00000392557 H3BVH4 76 aa8.38□□□□□ -1.07
BRF1-204ENST00000392557 AMTNQ6UX39 209 aa8.38□□□□□ -1.07
BRF1-204ENST00000392557 FLNBO75369 2602 aaKnown RBP8.38□□□□□ -1.07
BRF1-204ENST00000392557 MRPS12O15235 138 aaKnown RBP8.37□□□□□ -1.07
BRF1-204ENST00000392557 SMAGPQ0VAQ4 97 aa8.37□□□□□ -1.07
BRF1-204ENST00000392557 LY6EQ16553 131 aa8.37□□□□□ -1.07
BRF1-204ENST00000392557 ADAMTSL5Q6ZMM2 481 aa8.37□□□□□ -1.07
BRF1-204ENST00000392557 NPBQ8NG41 125 aa8.37□□□□□ -1.07
BRF1-204ENST00000392557 ZNF479Q96JC4 524 aa8.37□□□□□ -1.07
BRF1-204ENST00000392557 C16orf92Q96LL3 132 aa8.37□□□□□ -1.07
BRF1-204ENST00000392557 AGRNO00468 2067 aa8.37□□□□□ -1.07
BRF1-204ENST00000392557 TRBV25-1A0A075B6N4 114 aa8.37□□□□□ -1.07
BRF1-204ENST00000392557 A4D1N5 150 aa8.37□□□□□ -1.07
BRF1-204ENST00000392557 TEX48A0A1B0GUV7 120 aa8.37□□□□□ -1.07
BRF1-204ENST00000392557 G3V318 75 aa8.37□□□□□ -1.07
BRF1-204ENST00000392557 UBE2E1P51965 193 aa8.37□□□□□ -1.07
BRF1-204ENST00000392557 MINOS1Q5TGZ0 78 aa8.37□□□□□ -1.07
BRF1-204ENST00000392557 SCGB1D4Q6XE38 83 aa8.37□□□□□ -1.07
BRF1-204ENST00000392557 SRSF8Q9BRL6 282 aaKnown RBP8.37□□□□□ -1.07
BRF1-204ENST00000392557 PIMREGQ9BSJ6 248 aa8.37□□□□□ -1.07
BRF1-204ENST00000392557 MINOS1-NBL1R4GNA1 71 aa8.37□□□□□ -1.07
BRF1-204ENST00000392557 A0A1B0GV72 72 aa8.36□□□□□ -1.07
BRF1-204ENST00000392557 DEFB1P60022 68 aa8.36□□□□□ -1.07
BRF1-204ENST00000392557 LINC01548A6NM66 108 aa8.36□□□□□ -1.07
BRF1-204ENST00000392557 NPFFO15130 113 aa8.36□□□□□ -1.07
BRF1-204ENST00000392557 HIST2H2BDQ6DRA6 164 aa8.36□□□□□ -1.07
BRF1-204ENST00000392557 NPFFR1Q9GZQ6 430 aa8.36□□□□□ -1.07
BRF1-204ENST00000392557 SMAD5-AS1Q9Y6J3 95 aa8.36□□□□□ -1.07
BRF1-204ENST00000392557 IGHV7-81A0A0B4J1V7 117 aa8.36□□□□□ -1.07
BRF1-204ENST00000392557 ATP5LO75964 103 aa8.36□□□□□ -1.07
BRF1-204ENST00000392557 Q6ZQT7 251 aa8.36□□□□□ -1.07
BRF1-204ENST00000392557 TTC9CQ8N5M4 171 aa8.36□□□□□ -1.07
BRF1-204ENST00000392557 GLMPQ8WWB7 406 aa8.36□□□□□ -1.07
BRF1-204ENST00000392557 U3KQK5 164 aa8.36□□□□□ -1.07
BRF1-204ENST00000392557 FN1P02751 2386 aaKnown RBP8.35□□□□□ -1.07
BRF1-204ENST00000392557 H3BMG7 143 aa8.35□□□□□ -1.07
BRF1-204ENST00000392557 OVOL3O00110 214 aa8.35□□□□□ -1.07
BRF1-204ENST00000392557 SIVA1O15304 175 aa8.35□□□□□ -1.07
BRF1-204ENST00000392557 ATP6V0E1O15342 81 aa8.35□□□□□ -1.07
BRF1-204ENST00000392557 LAGE3Q14657 143 aa8.35□□□□□ -1.07
BRF1-204ENST00000392557 Q8N9W7 124 aa8.35□□□□□ -1.07
BRF1-204ENST00000392557 MAPK1IP1LQ8NDC0 245 aa8.35□□□□□ -1.07
BRF1-204ENST00000392557 ZNF502Q8TBZ5 544 aa8.35□□□□□ -1.07
BRF1-204ENST00000392557 METTL26Q96S19 204 aa8.35□□□□□ -1.07
BRF1-204ENST00000392557 ATP6V0BQ99437 205 aa8.35□□□□□ -1.07
BRF1-204ENST00000392557 CYSLTR1Q9Y271 337 aa8.35□□□□□ -1.07
BRF1-204ENST00000392557 IGHV4-30-2A0A087WSY4 118 aa8.35□□□□□ -1.07
BRF1-204ENST00000392557 G3V4G9 280 aa8.35□□□□□ -1.07
BRF1-204ENST00000392557 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.35□□□□□ -1.07
BRF1-204ENST00000392557 UFSP1Q6NVU6 142 aa8.35□□□□□ -1.07
BRF1-204ENST00000392557 RNF185Q96GF1 192 aa8.35□□□□□ -1.07
BRF1-204ENST00000392557 AGPAT4-IT1Q9H0P7 198 aa8.35□□□□□ -1.07
BRF1-204ENST00000392557 CENPVL3A0A0U1RRI6 287 aa8.35□□□□□ -1.07
BRF1-204ENST00000392557 OR11H12B2RN74 326 aa8.35□□□□□ -1.07
BRF1-204ENST00000392557 J3QR89 54 aa8.35□□□□□ -1.07
BRF1-204ENST00000392557 SRSF9Q13242 221 aaKnown RBP eCLIP8.35□□□□□ -1.07
BRF1-204ENST00000392557 ETDBQ3ZM63 59 aa8.35□□□□□ -1.07
BRF1-204ENST00000392557 SAMD13Q5VXD3 122 aa8.35□□□□□ -1.07
BRF1-204ENST00000392557 OR11H1Q8NG94 326 aa8.35□□□□□ -1.07
BRF1-204ENST00000392557 OR11H2Q8NH07 326 aa8.35□□□□□ -1.07
BRF1-204ENST00000392557 SCGB3A1Q96QR1 104 aa8.35□□□□□ -1.07
BRF1-204ENST00000392557 IGLC6P0CF74 106 aa8.34□□□□□ -1.07
BRF1-204ENST00000392557 LOC107984156A0A0G2JMH3 177 aa8.34□□□□□ -1.07
BRF1-204ENST00000392557 ARL17AQ8IVW1 177 aa8.34□□□□□ -1.07
BRF1-204ENST00000392557 PRRC2AP48634 2157 aaKnown RBP8.34□□□□□ -1.07
BRF1-204ENST00000392557 OOSP1A8MZH6 123 aa8.33□□□□□ -1.08
BRF1-204ENST00000392557 F8W735 103 aaPredicted RBP8.33□□□□□ -1.08
BRF1-204ENST00000392557 EMP1P54849 157 aa8.33□□□□□ -1.08
BRF1-204ENST00000392557 SH2D6Q7Z4S9 175 aa8.33□□□□□ -1.08
BRF1-204ENST00000392557 SRD5A1P18405 259 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms