RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 DEFB4AO15263 64 aa4.85□□□□□ -1.63
UBBP1-201ENST00000392399 APOC3P02656 99 aa4.85□□□□□ -1.63
UBBP1-201ENST00000392399 HTN1P15515 57 aa4.85□□□□□ -1.63
UBBP1-201ENST00000392399 AZU1P20160 251 aa4.85□□□□□ -1.63
UBBP1-201ENST00000392399 AKR1C3P42330 323 aa4.85□□□□□ -1.63
UBBP1-201ENST00000392399 ATP5G3P48201 142 aa4.85□□□□□ -1.63
UBBP1-201ENST00000392399 TMEM183BQ1AE95 376 aa4.85□□□□□ -1.63
UBBP1-201ENST00000392399 TDRG1Q3Y452 100 aa4.85□□□□□ -1.63
UBBP1-201ENST00000392399 IBA57Q5T440 356 aaKnown RBP4.85□□□□□ -1.63
UBBP1-201ENST00000392399 FAM159AQ6UWV7 190 aa4.85□□□□□ -1.63
UBBP1-201ENST00000392399 PRNTQ86SH4 94 aa4.85□□□□□ -1.63
UBBP1-201ENST00000392399 CLRN3Q8NCR9 226 aa4.85□□□□□ -1.63
UBBP1-201ENST00000392399 RNASE8Q8TDE3 154 aaKnown RBP4.85□□□□□ -1.63
UBBP1-201ENST00000392399 C2CD4CQ8TF44 421 aa4.85□□□□□ -1.63
UBBP1-201ENST00000392399 TVP23CQ96ET8 276 aa4.85□□□□□ -1.63
UBBP1-201ENST00000392399 KCNS1Q96KK3 526 aa4.85□□□□□ -1.63
UBBP1-201ENST00000392399 LINC00479Q96M42 142 aa4.85□□□□□ -1.63
UBBP1-201ENST00000392399 DKK2Q9UBU2 259 aa4.85□□□□□ -1.63
UBBP1-201ENST00000392399 LY96Q9Y6Y9 160 aa4.85□□□□□ -1.63
UBBP1-201ENST00000392399 TENM2Q9NT68 2774 aa4.85□□□□□ -1.63
UBBP1-201ENST00000392399 DYNC2H1Q8NCM8 4307 aaKnown RBP4.84□□□□□ -1.63
UBBP1-201ENST00000392399 PLECQ15149 4684 aaKnown RBP4.84□□□□□ -1.63
UBBP1-201ENST00000392399 A0A087WWC5 75 aa4.84□□□□□ -1.63
UBBP1-201ENST00000392399 TRAV34A0A0B4J273 112 aa4.84□□□□□ -1.63
UBBP1-201ENST00000392399 NUPR2A6NF83 97 aa4.84□□□□□ -1.63
UBBP1-201ENST00000392399 CBY3A6NI87 242 aa4.84□□□□□ -1.63
UBBP1-201ENST00000392399 FABP5P3A8MUU1 101 aa4.84□□□□□ -1.63
UBBP1-201ENST00000392399 SNURFLB1AK76 121 aa4.84□□□□□ -1.63
UBBP1-201ENST00000392399 C9JCJ5 164 aa4.84□□□□□ -1.63
UBBP1-201ENST00000392399 GCGP01275 180 aa4.84□□□□□ -1.63
UBBP1-201ENST00000392399 PFN1P07737 140 aaKnown RBP4.84□□□□□ -1.63
UBBP1-201ENST00000392399 EMP1P54849 157 aa4.84□□□□□ -1.63
UBBP1-201ENST00000392399 DAZ2Q13117 558 aaKnown RBP4.84□□□□□ -1.63
UBBP1-201ENST00000392399 CASC10Q5T4H9 136 aa4.84□□□□□ -1.63
UBBP1-201ENST00000392399 PRR9Q5T870 116 aa4.84□□□□□ -1.63
UBBP1-201ENST00000392399 FAM222AQ5U5X8 452 aa4.84□□□□□ -1.63
UBBP1-201ENST00000392399 SGK494Q96LW2 274 aa4.84□□□□□ -1.63
UBBP1-201ENST00000392399 NAT8Q9UHE5 227 aa4.84□□□□□ -1.63
UBBP1-201ENST00000392399 TP53TG3Q9ULZ0 132 aa4.84□□□□□ -1.63
UBBP1-201ENST00000392399 KLK5Q9Y337 293 aaPredicted RBP4.84□□□□□ -1.63
UBBP1-201ENST00000392399 CSMD3Q7Z407 3707 aa4.84□□□□□ -1.63
UBBP1-201ENST00000392399 TRGV11A0A075B6L2 103 aa4.83□□□□□ -1.64
UBBP1-201ENST00000392399 TRAV10A0A0B4J240 114 aa4.83□□□□□ -1.64
UBBP1-201ENST00000392399 PLAC8L1A1L4L8 177 aa4.83□□□□□ -1.64
UBBP1-201ENST00000392399 GHRHP01286 108 aa4.83□□□□□ -1.64
UBBP1-201ENST00000392399 LTAP01374 205 aa4.83□□□□□ -1.64
UBBP1-201ENST00000392399 PRM2P04554 102 aa4.83□□□□□ -1.64
UBBP1-201ENST00000392399 TCL1AP56279 114 aa4.83□□□□□ -1.64
UBBP1-201ENST00000392399 TCTAP57738 103 aa4.83□□□□□ -1.64
UBBP1-201ENST00000392399 NANOS2P60321 138 aaKnown RBP4.83□□□□□ -1.64
UBBP1-201ENST00000392399 C12orf74Q32Q52 190 aa4.83□□□□□ -1.64
UBBP1-201ENST00000392399 CEMP1Q6PRD7 247 aaPredicted RBP4.83□□□□□ -1.64
UBBP1-201ENST00000392399 Q86TA4 180 aa4.83□□□□□ -1.64
UBBP1-201ENST00000392399 BAGE2Q86Y30 109 aa4.83□□□□□ -1.64
UBBP1-201ENST00000392399 TMEM183AQ8IXX5 376 aa4.83□□□□□ -1.64
UBBP1-201ENST00000392399 PHLDA1Q8WV24 401 aaPredicted RBP4.83□□□□□ -1.64
UBBP1-201ENST00000392399 SMIM12Q96EX1 92 aa4.83□□□□□ -1.64
UBBP1-201ENST00000392399 C8orf49Q96NF6 230 aa4.83□□□□□ -1.64
UBBP1-201ENST00000392399 SPXQ9BT56 116 aa4.83□□□□□ -1.64
UBBP1-201ENST00000392399 MRPL18Q9H0U6 180 aaKnown RBP4.83□□□□□ -1.64
UBBP1-201ENST00000392399 PARLQ9H300 379 aa4.83□□□□□ -1.64
UBBP1-201ENST00000392399 TMEM242Q9NWH2 141 aa4.83□□□□□ -1.64
UBBP1-201ENST00000392399 ZNF727A8MUV8 499 aa4.82□□□□□ -1.64
UBBP1-201ENST00000392399 RPL35P42766 123 aaKnown RBP4.82□□□□□ -1.64
UBBP1-201ENST00000392399 ZNF80P51504 273 aaPredicted RBP4.82□□□□□ -1.64
UBBP1-201ENST00000392399 DAD1P61803 113 aa4.82□□□□□ -1.64
UBBP1-201ENST00000392399 ZNF415Q09FC8 603 aa4.82□□□□□ -1.64
UBBP1-201ENST00000392399 TMEM241Q24JQ0 296 aa4.82□□□□□ -1.64
UBBP1-201ENST00000392399 ZNF674Q2M3X9 581 aa4.82□□□□□ -1.64
UBBP1-201ENST00000392399 LGALS9BQ3B8N2 356 aa4.82□□□□□ -1.64
UBBP1-201ENST00000392399 MUC21Q5SSG8 566 aa4.82□□□□□ -1.64
UBBP1-201ENST00000392399 Q6ZTC4 211 aa4.82□□□□□ -1.64
UBBP1-201ENST00000392399 C11orf72Q8NBR9 251 aa4.82□□□□□ -1.64
UBBP1-201ENST00000392399 FAM210BQ96KR6 192 aa4.82□□□□□ -1.64
UBBP1-201ENST00000392399 C18orf15Q96N68 181 aa4.82□□□□□ -1.64
UBBP1-201ENST00000392399 SMIM7Q9BQ49 75 aa4.82□□□□□ -1.64
UBBP1-201ENST00000392399 MLST8Q9BVC4 326 aa4.82□□□□□ -1.64
UBBP1-201ENST00000392399 SDF2L1Q9HCN8 221 aa4.82□□□□□ -1.64
UBBP1-201ENST00000392399 NOP10Q9NPE3 64 aaKnown RBP4.82□□□□□ -1.64
UBBP1-201ENST00000392399 BIN3Q9NQY0 253 aa4.82□□□□□ -1.64
UBBP1-201ENST00000392399 GSN-AS1Q9NRJ2 163 aa4.82□□□□□ -1.64
UBBP1-201ENST00000392399 CELA1Q9UNI1 258 aa4.82□□□□□ -1.64
UBBP1-201ENST00000392399 STARD9Q9P2P6 4700 aa4.81□□□□□ -1.64
UBBP1-201ENST00000392399 DEFB131BA0A096LNP1 70 aa4.81□□□□□ -1.64
UBBP1-201ENST00000392399 C7orf77A4D0Y5 90 aa4.81□□□□□ -1.64
UBBP1-201ENST00000392399 ATP5G1P05496 136 aa4.81□□□□□ -1.64
UBBP1-201ENST00000392399 CRIP1P50238 77 aa4.81□□□□□ -1.64
UBBP1-201ENST00000392399 FAM162BQ5T6X4 162 aa4.81□□□□□ -1.64
UBBP1-201ENST00000392399 ZFAND6Q6FIF0 208 aa4.81□□□□□ -1.64
UBBP1-201ENST00000392399 Q6ZQT7 251 aa4.81□□□□□ -1.64
UBBP1-201ENST00000392399 LINC00612Q8N6U2 182 aa4.81□□□□□ -1.64
UBBP1-201ENST00000392399 ZC2HC1AQ96GY0 325 aa4.81□□□□□ -1.64
UBBP1-201ENST00000392399 KRTAP9-2Q9BYQ4 174 aa4.81□□□□□ -1.64
UBBP1-201ENST00000392399 CTDSP1Q9GZU7 261 aa4.81□□□□□ -1.64
UBBP1-201ENST00000392399 SMCO4Q9NRQ5 59 aa4.81□□□□□ -1.64
UBBP1-201ENST00000392399 NAGKQ9UJ70 344 aa4.81□□□□□ -1.64
UBBP1-201ENST00000392399 IGHV3-16A0A0C4DH30 117 aa4.8□□□□□ -1.64
UBBP1-201ENST00000392399 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.8□□□□□ -1.64
UBBP1-201ENST00000392399 M0R036 132 aa4.8□□□□□ -1.64
UBBP1-201ENST00000392399 PPP1R2P9O14990 202 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms