RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 FAM216BQ8N7L0 139 aa-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 OR8J2Q8NGG1 315 aa-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 OR6N2Q8NGY6 317 aa-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 OR5AK2Q8NH90 309 aa-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 VSTM2AQ8TAG5 236 aa-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 STOML3Q8TAV4 291 aa-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 PIGXQ8TBF5 258 aa-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 STAG3L4Q8TBR4 150 aa-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 LRRC20Q8TCA0 184 aa-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 CCDC12Q8WUD4 166 aaPredicted RBP-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 TEX37Q96LM6 180 aa-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 CMSS1Q9BQ75 279 aaKnown RBP-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 NPCDR1Q9BY65 106 aa-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 RSPH9Q9H1X1 276 aaPredicted RBP-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 C11orf68Q9H3H3 251 aaKnown RBP-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 LYRM4Q9HD34 91 aa-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 HYPKQ9NX55 129 aa-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 CRIPTQ9P021 101 aa-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 HIGD1BQ9P298 99 aa-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 DKKL1Q9UK85 242 aa-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 NDUFAF1Q9Y375 327 aa-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 TPRKBQ9Y3C4 175 aa-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 V9GYY9 64 aa-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 PLXNB2O15031 1838 aa-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 NUP98P52948 1817 aa-0.97□□□□□ -2.56
TRAJ28-201ENST00000390509 PLXNA1Q9UIW2 1896 aa-0.97□□□□□ -2.57
TRAJ28-201ENST00000390509 HELZP42694 1942 aaKnown RBP-0.97□□□□□ -2.57
TRAJ28-201ENST00000390509 KIF15Q9NS87 1388 aa-0.97□□□□□ -2.57
TRAJ28-201ENST00000390509 FYCO1Q9BQS8 1478 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 SPEGQ15772 3267 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 MAP2P11137 1827 aaKnown RBP-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 HMGXB3Q12766 1538 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 ARHGEF5Q12774 1597 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 SETBP1Q9Y6X0 1596 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 TRAV5A0A0B4J249 113 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 TRAV26-2A0A0B4J265 109 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 A0A1B0GTQ1 180 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 CXorf51AA0A1B0GTR3 108 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 LINC00959A0A1B0GUT2 108 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 hADV38S2A0JD32 116 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 DAPL1A0PJW8 107 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 CCDC169A6NNP5 214 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 KPNA4O00629 521 aaPredicted RBP-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 RER1O15258 196 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 MTX2O75431 263 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 WBP4O75554 376 aaKnown RBP-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 ADAP1O75689 374 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 TRACP01848 142 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 IFNA4P05014 189 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 IL3P08700 152 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 RPS17P08708 135 aaKnown RBP-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 TNP1P09430 55 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 OR5G3P0C626 314 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 SMIM10L2AP0DMW4 78 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 SMIM10L2BP0DMW5 78 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 NQO2P16083 231 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 GTF2A1P52655 376 aaPredicted RBP-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 HADHBP55084 474 aaKnown RBP-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 ATP5IP56385 69 aaPredicted RBP-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 NDUFA6P56556 154 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 MRPS36P82909 103 aaKnown RBP-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 SMAGPQ0VAQ4 97 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 MLLT11Q13015 90 aaPredicted RBP-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 FLOT2Q14254 428 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 LRRC23Q53EV4 343 aaPredicted RBP-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 SPANXN2Q5MJ10 180 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 C6orf183Q5T699 404 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 BCL2L15Q5TBC7 163 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 CST9Q5W186 159 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 TMEM53Q6P2H8 277 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 SCIMPQ6UWF3 145 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 EIF3MQ7L2H7 374 aaKnown RBP-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 SSX6Q7RTT6 188 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 STX12Q86Y82 276 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 TRAPPC5Q8IUR0 188 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 COMMD1Q8N668 190 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 ANKRD29Q8N6D5 301 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 CT55Q8WUE5 264 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 PPDPFLQ8WWR9 84 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 IFT81Q8WYA0 676 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 DIRC1Q969H9 104 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 ATP6V1E2Q96A05 226 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 DTNBP1Q96EV8 351 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 C8orf76Q96K31 380 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 PRELID3AQ96N28 172 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 DCUN1D5Q9BTE7 237 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 GON7Q9BXV9 100 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 PKIBQ9C010 78 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 MAP1LC3BQ9GZQ8 125 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 MAP1LC3AQ9H492 121 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 MRPL40Q9NQ50 206 aaKnown RBP-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 PRTFDC1Q9NRG1 225 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 UQCC1Q9NVA1 299 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 TERF2IPQ9NYB0 399 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 MOSPD1Q9UJG1 213 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 MPC1Q9Y5U8 109 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 TMEM56-RWDD3S4R434 201 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 MYLKQ15746 1914 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 DNMT1P26358 1616 aaKnown RBP-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 TMEM94Q12767 1356 aa-0.98□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms