RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 IGHV7-4-1A0A0J9YVY3 117 aa11.51□□□□□ -0.57
CTNS-202ENST00000381870 TMEM262E9PQX1 116 aa11.51□□□□□ -0.57
CTNS-202ENST00000381870 NDUFV3P56181 108 aaKnown RBP11.51□□□□□ -0.57
CTNS-202ENST00000381870 LYRM7Q5U5X0 104 aa11.51□□□□□ -0.57
CTNS-202ENST00000381870 SMIM2Q9BVW6 85 aa11.51□□□□□ -0.57
CTNS-202ENST00000381870 CEP250Q9BV73 2442 aa11.51□□□□□ -0.57
CTNS-202ENST00000381870 MBD3L4A6NDZ8 208 aaPredicted RBP11.51□□□□□ -0.57
CTNS-202ENST00000381870 MBD3L3A6NE82 208 aaPredicted RBP11.51□□□□□ -0.57
CTNS-202ENST00000381870 MBD3L5A6NJ08 208 aaPredicted RBP11.51□□□□□ -0.57
CTNS-202ENST00000381870 SMIM20Q8N5G0 67 aa11.51□□□□□ -0.57
CTNS-202ENST00000381870 MBD3L2Q8NHZ7 208 aaPredicted RBP11.51□□□□□ -0.57
CTNS-202ENST00000381870 BAALCQ8WXS3 180 aa11.51□□□□□ -0.57
CTNS-202ENST00000381870 TOMM6Q96B49 74 aa11.51□□□□□ -0.57
CTNS-202ENST00000381870 TACC2O95359 2948 aa11.51□□□□□ -0.57
CTNS-202ENST00000381870 IGHV3-35A0A0C4DH35 117 aa11.5□□□□□ -0.57
CTNS-202ENST00000381870 CFC1BP0CG36 223 aa11.5□□□□□ -0.57
CTNS-202ENST00000381870 CFC1P0CG37 223 aa11.5□□□□□ -0.57
CTNS-202ENST00000381870 SCGB1C2P0DMR2 95 aa11.5□□□□□ -0.57
CTNS-202ENST00000381870 CRIP2P52943 208 aaPredicted RBP11.5□□□□□ -0.57
CTNS-202ENST00000381870 ADIPOQQ15848 244 aa11.5□□□□□ -0.57
CTNS-202ENST00000381870 PKDREJQ9NTG1 2253 aa11.5□□□□□ -0.57
CTNS-202ENST00000381870 MFAP4P55083 255 aa11.5□□□□□ -0.57
CTNS-202ENST00000381870 GAGE2BQ13066 116 aa11.5□□□□□ -0.57
CTNS-202ENST00000381870 C3orf36Q3SXR2 165 aa11.5□□□□□ -0.57
CTNS-202ENST00000381870 GAGE2EQ4V326 116 aa11.5□□□□□ -0.57
CTNS-202ENST00000381870 ASCL5Q7RTU5 278 aa11.5□□□□□ -0.57
CTNS-202ENST00000381870 ZGRF1Q86YA3 2104 aa11.5□□□□□ -0.57
CTNS-202ENST00000381870 FANCD2OSQ96PS1 177 aa11.5□□□□□ -0.57
CTNS-202ENST00000381870 GAGE2DQ9UEU5 116 aa11.5□□□□□ -0.57
CTNS-202ENST00000381870 TRAV8-2A0A0B4J237 113 aa11.49□□□□□ -0.57
CTNS-202ENST00000381870 SPANXN1Q5VSR9 72 aa11.49□□□□□ -0.57
CTNS-202ENST00000381870 Q6ZS46 218 aa11.49□□□□□ -0.57
CTNS-202ENST00000381870 ONECUT1Q9UBC0 465 aa11.49□□□□□ -0.57
CTNS-202ENST00000381870 GAGE12JA6NER3 117 aa11.49□□□□□ -0.57
CTNS-202ENST00000381870 GAGE7O76087 117 aa11.49□□□□□ -0.57
CTNS-202ENST00000381870 GAGE12FP0CL80 117 aa11.49□□□□□ -0.57
CTNS-202ENST00000381870 GAGE12GP0CL81 117 aa11.49□□□□□ -0.57
CTNS-202ENST00000381870 GAGE12IP0CL82 117 aa11.49□□□□□ -0.57
CTNS-202ENST00000381870 GAGE4Q13068 117 aa11.49□□□□□ -0.57
CTNS-202ENST00000381870 FAM110AQ9BQ89 295 aa11.49□□□□□ -0.57
CTNS-202ENST00000381870 RP1L1Q8IWN7 2480 aaPredicted RBP11.49□□□□□ -0.57
CTNS-202ENST00000381870 A0A0J9YY99 117 aa11.48□□□□□ -0.57
CTNS-202ENST00000381870 SPRY2O43597 315 aa11.48□□□□□ -0.57
CTNS-202ENST00000381870 SLC25A20O43772 301 aa11.48□□□□□ -0.57
CTNS-202ENST00000381870 RPL32P62910 135 aaKnown RBP11.48□□□□□ -0.57
CTNS-202ENST00000381870 SNCGO76070 127 aa11.48□□□□□ -0.57
CTNS-202ENST00000381870 EMP1P54849 157 aa11.48□□□□□ -0.57
CTNS-202ENST00000381870 TRPT1Q86TN4 253 aaKnown RBP11.48□□□□□ -0.57
CTNS-202ENST00000381870 DEFB124Q8NES8 71 aa11.48□□□□□ -0.57
CTNS-202ENST00000381870 C9JAW5 83 aa11.47□□□□□ -0.57
CTNS-202ENST00000381870 TIMM23O14925 209 aa11.47□□□□□ -0.57
CTNS-202ENST00000381870 ORMDL2Q53FV1 153 aa11.47□□□□□ -0.57
CTNS-202ENST00000381870 C2orf66Q6UXQ4 117 aa11.47□□□□□ -0.57
CTNS-202ENST00000381870 C10orf126Q8N4M7 172 aa11.47□□□□□ -0.57
CTNS-202ENST00000381870 RPL39LQ96EH5 51 aaKnown RBP11.47□□□□□ -0.57
CTNS-202ENST00000381870 FAM215AQ9Y5M1 114 aa11.47□□□□□ -0.57
CTNS-202ENST00000381870 IGLV11-55A0A075B6I3 123 aa11.47□□□□□ -0.57
CTNS-202ENST00000381870 NUP37Q8NFH4 326 aa11.47□□□□□ -0.57
CTNS-202ENST00000381870 AGPAT4-IT1Q9H0P7 198 aa11.47□□□□□ -0.57
CTNS-202ENST00000381870 C21orf62Q9NYP8 219 aa11.47□□□□□ -0.57
CTNS-202ENST00000381870 IGHV3-30P01768 117 aa11.46□□□□□ -0.57
CTNS-202ENST00000381870 IGHV3-30-5P0DP03 117 aa11.46□□□□□ -0.57
CTNS-202ENST00000381870 RAX2Q96IS3 184 aa11.46□□□□□ -0.57
CTNS-202ENST00000381870 TRAV17A0A0B4J275 112 aa11.46□□□□□ -0.58
CTNS-202ENST00000381870 IFITM1P13164 125 aa11.46□□□□□ -0.58
CTNS-202ENST00000381870 NBL1P41271 181 aa11.46□□□□□ -0.58
CTNS-202ENST00000381870 SUMO2P61956 95 aaKnown RBP11.46□□□□□ -0.58
CTNS-202ENST00000381870 TTC32Q5I0X7 151 aa11.46□□□□□ -0.58
CTNS-202ENST00000381870 MSRB2Q9Y3D2 182 aa11.45□□□□□ -0.58
CTNS-202ENST00000381870 IGHV3-66A0A0C4DH42 116 aa11.45□□□□□ -0.58
CTNS-202ENST00000381870 C11orf86A6NJI1 115 aa11.45□□□□□ -0.58
CTNS-202ENST00000381870 ZNF883P0CG24 379 aa11.45□□□□□ -0.58
CTNS-202ENST00000381870 KAAG1Q9UBP8 84 aa11.45□□□□□ -0.58
CTNS-202ENST00000381870 PRO1854Q9UHT4 67 aa11.45□□□□□ -0.58
CTNS-202ENST00000381870 AKAP13Q12802 2813 aa11.45□□□□□ -0.58
CTNS-202ENST00000381870 NBR2O15453 112 aa11.44□□□□□ -0.58
CTNS-202ENST00000381870 CRYGDP07320 174 aa11.44□□□□□ -0.58
CTNS-202ENST00000381870 CTSGP08311 255 aa11.44□□□□□ -0.58
CTNS-202ENST00000381870 TSPEAR-AS2P59090 65 aa11.44□□□□□ -0.58
CTNS-202ENST00000381870 TPRP12270 2363 aaKnown RBP11.44□□□□□ -0.58
CTNS-202ENST00000381870 ASIPP42127 132 aa11.44□□□□□ -0.58
CTNS-202ENST00000381870 FAM159AQ6UWV7 190 aa11.44□□□□□ -0.58
CTNS-202ENST00000381870 DEFB104AQ8WTQ1 72 aa11.44□□□□□ -0.58
CTNS-202ENST00000381870 SLC50A1Q9BRV3 221 aa11.44□□□□□ -0.58
CTNS-202ENST00000381870 NTN5Q8WTR8 489 aaPredicted RBP11.43□□□□□ -0.58
CTNS-202ENST00000381870 IGHV4-4A0A075B6R2 117 aa11.43□□□□□ -0.58
CTNS-202ENST00000381870 RNF223E7ERA6 249 aa11.43□□□□□ -0.58
CTNS-202ENST00000381870 LY6LH3BQJ8 138 aa11.43□□□□□ -0.58
CTNS-202ENST00000381870 EIF4EBP3O60516 100 aaPredicted RBP11.43□□□□□ -0.58
CTNS-202ENST00000381870 PIP4P1Q86T03 277 aa11.43□□□□□ -0.58
CTNS-202ENST00000381870 Q8N1Y9 231 aa11.43□□□□□ -0.58
CTNS-202ENST00000381870 RNF5Q99942 180 aa11.43□□□□□ -0.58
CTNS-202ENST00000381870 IGLV4-69A0A075B6H9 119 aa11.42□□□□□ -0.58
CTNS-202ENST00000381870 IGHV3OR16-13A0A075B7E8 117 aa11.42□□□□□ -0.58
CTNS-202ENST00000381870 IGHV3-74A0A0B4J1X5 117 aa11.42□□□□□ -0.58
CTNS-202ENST00000381870 H7C2G1 150 aa11.42□□□□□ -0.58
CTNS-202ENST00000381870 DUSP14O95147 198 aaKnown RBP11.42□□□□□ -0.58
CTNS-202ENST00000381870 NDPQ00604 133 aa11.42□□□□□ -0.58
CTNS-202ENST00000381870 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.42□□□□□ -0.58
CTNS-202ENST00000381870 ADGRG4Q8IZF6 3080 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms