RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 IGKV2-40A0A087WW87 121 aaPredicted RBP8.99□□□□□ -0.97
RPAIN-202ENST00000381208 OR7C2O60412 319 aa8.99□□□□□ -0.97
RPAIN-202ENST00000381208 CDK2AP2O75956 126 aa8.99□□□□□ -0.97
RPAIN-202ENST00000381208 IFNA5P01569 189 aa8.99□□□□□ -0.97
RPAIN-202ENST00000381208 IGKV2D-40P01614 121 aaPredicted RBP8.99□□□□□ -0.97
RPAIN-202ENST00000381208 KHDC3LQ587J8 217 aa8.99□□□□□ -0.97
RPAIN-202ENST00000381208 SCGB1C1Q8TD33 95 aa8.99□□□□□ -0.97
RPAIN-202ENST00000381208 FXYD5Q96DB9 178 aa8.99□□□□□ -0.97
RPAIN-202ENST00000381208 VGLL1Q99990 258 aa8.99□□□□□ -0.97
RPAIN-202ENST00000381208 A0A096LPF7 62 aa8.98□□□□□ -0.97
RPAIN-202ENST00000381208 ZNF415Q09FC8 603 aa8.98□□□□□ -0.97
RPAIN-202ENST00000381208 ALKAL2Q6UX46 152 aa8.98□□□□□ -0.97
RPAIN-202ENST00000381208 ANAPC16Q96DE5 110 aa8.98□□□□□ -0.97
RPAIN-202ENST00000381208 VSIG2Q96IQ7 327 aa8.98□□□□□ -0.97
RPAIN-202ENST00000381208 SMIM3Q9BZL3 60 aa8.98□□□□□ -0.97
RPAIN-202ENST00000381208 PRO0255Q9UI72 69 aa8.98□□□□□ -0.97
RPAIN-202ENST00000381208 KLF12Q9Y4X4 402 aa8.98□□□□□ -0.97
RPAIN-202ENST00000381208 ICOSQ9Y6W8 199 aa8.98□□□□□ -0.97
RPAIN-202ENST00000381208 H2AFB1P0C5Y9 115 aa8.97□□□□□ -0.97
RPAIN-202ENST00000381208 OR10J4P0C629 311 aa8.97□□□□□ -0.97
RPAIN-202ENST00000381208 UBE2L3P68036 154 aaKnown RBP8.97□□□□□ -0.97
RPAIN-202ENST00000381208 ZNF266Q14584 549 aa8.97□□□□□ -0.97
RPAIN-202ENST00000381208 FFAR4Q5NUL3 377 aa8.97□□□□□ -0.97
RPAIN-202ENST00000381208 FAM74A1Q5RGS3 127 aa8.97□□□□□ -0.97
RPAIN-202ENST00000381208 COMMD7Q86VX2 200 aa8.97□□□□□ -0.97
RPAIN-202ENST00000381208 TMED6Q8WW62 240 aa8.97□□□□□ -0.97
RPAIN-202ENST00000381208 RANP62826 216 aaKnown RBP8.96□□□□□ -0.98
RPAIN-202ENST00000381208 MRPL23Q16540 153 aaKnown RBP8.96□□□□□ -0.98
RPAIN-202ENST00000381208 SPXQ9BT56 116 aa8.96□□□□□ -0.98
RPAIN-202ENST00000381208 TRGV11A0A075B6L2 103 aa8.95□□□□□ -0.98
RPAIN-202ENST00000381208 BORCS7-ASMTA0A0B4J1R7 106 aa8.95□□□□□ -0.98
RPAIN-202ENST00000381208 SIVA1O15304 175 aa8.95□□□□□ -0.98
RPAIN-202ENST00000381208 FAM159AQ6UWV7 190 aa8.95□□□□□ -0.98
RPAIN-202ENST00000381208 PQLC2Q6ZP29 291 aa8.95□□□□□ -0.98
RPAIN-202ENST00000381208 CMTM2Q8TAZ6 248 aa8.95□□□□□ -0.98
RPAIN-202ENST00000381208 CYTL1Q9NRR1 136 aa8.95□□□□□ -0.98
RPAIN-202ENST00000381208 TP53TG3Q9ULZ0 132 aa8.95□□□□□ -0.98
RPAIN-202ENST00000381208 HHLA3Q9XRX5 114 aa8.95□□□□□ -0.98
RPAIN-202ENST00000381208 RYR1P21817 5038 aa8.95□□□□□ -0.98
RPAIN-202ENST00000381208 DIRC3C9JPN6 131 aa8.94□□□□□ -0.98
RPAIN-202ENST00000381208 K7EP13 123 aa8.94□□□□□ -0.98
RPAIN-202ENST00000381208 ACOT6Q3I5F7 207 aaPredicted RBP8.94□□□□□ -0.98
RPAIN-202ENST00000381208 PRR9Q5T870 116 aa8.94□□□□□ -0.98
RPAIN-202ENST00000381208 Q6AWC8 147 aa8.94□□□□□ -0.98
RPAIN-202ENST00000381208 KRTAP1-5Q9BYS1 174 aa8.94□□□□□ -0.98
RPAIN-202ENST00000381208 OTORQ9NRC9 128 aa8.94□□□□□ -0.98
RPAIN-202ENST00000381208 PCLOQ9Y6V0 5065 aa8.93□□□□□ -0.98
RPAIN-202ENST00000381208 TRAV9-2A0A087WT02 112 aa8.93□□□□□ -0.98
RPAIN-202ENST00000381208 CRYBA4P53673 196 aa8.93□□□□□ -0.98
RPAIN-202ENST00000381208 SPATA12Q7Z6I5 190 aa8.93□□□□□ -0.98
RPAIN-202ENST00000381208 NFE4Q86UQ8 179 aa8.93□□□□□ -0.98
RPAIN-202ENST00000381208 Q8TAT8 98 aa8.93□□□□□ -0.98
RPAIN-202ENST00000381208 RASL10AQ92737 203 aa8.93□□□□□ -0.98
RPAIN-202ENST00000381208 SSBP4Q9BWG4 385 aaPredicted RBP8.93□□□□□ -0.98
RPAIN-202ENST00000381208 MRPL16Q9NX20 251 aaKnown RBP8.93□□□□□ -0.98
RPAIN-202ENST00000381208 LRP1BQ9NZR2 4599 aa8.93□□□□□ -0.98
RPAIN-202ENST00000381208 TRGV4A0A0C4DH28 118 aa8.92□□□□□ -0.98
RPAIN-202ENST00000381208 A0A1W2PPV4 95 aa8.92□□□□□ -0.98
RPAIN-202ENST00000381208 NXPH4O95158 308 aa8.92□□□□□ -0.98
RPAIN-202ENST00000381208 ORM1P02763 201 aa8.92□□□□□ -0.98
RPAIN-202ENST00000381208 FHL2Q14192 279 aa8.92□□□□□ -0.98
RPAIN-202ENST00000381208 TDRG1Q3Y452 100 aa8.92□□□□□ -0.98
RPAIN-202ENST00000381208 NEGR1Q7Z3B1 354 aa8.92□□□□□ -0.98
RPAIN-202ENST00000381208 OR10G4Q8NGN3 311 aa8.92□□□□□ -0.98
RPAIN-202ENST00000381208 PCNPQ8WW12 178 aaKnown RBP8.92□□□□□ -0.98
RPAIN-202ENST00000381208 WFDC1Q9HC57 220 aa8.92□□□□□ -0.98
RPAIN-202ENST00000381208 TRAV21A0A0B4J279 112 aa8.91□□□□□ -0.98
RPAIN-202ENST00000381208 SERTM2A0A1B0GWG4 89 aa8.91□□□□□ -0.98
RPAIN-202ENST00000381208 IGHV3-53P01767 116 aa8.91□□□□□ -0.98
RPAIN-202ENST00000381208 LINC00315P59091 139 aa8.91□□□□□ -0.98
RPAIN-202ENST00000381208 PGPA6NDG6 321 aa8.9□□□□□ -0.98
RPAIN-202ENST00000381208 KRBOX1C9JBD0 128 aa8.9□□□□□ -0.98
RPAIN-202ENST00000381208 SEC11BP0C7V7 166 aa8.9□□□□□ -0.98
RPAIN-202ENST00000381208 SRIP30626 198 aa8.9□□□□□ -0.98
RPAIN-202ENST00000381208 TMEM183BQ1AE95 376 aa8.9□□□□□ -0.98
RPAIN-202ENST00000381208 MUC21Q5SSG8 566 aa8.9□□□□□ -0.98
RPAIN-202ENST00000381208 RPL7L1Q6DKI1 246 aaKnown RBP8.9□□□□□ -0.98
RPAIN-202ENST00000381208 LYPD5Q6UWN5 251 aa8.9□□□□□ -0.98
RPAIN-202ENST00000381208 SH2D6Q7Z4S9 175 aa8.9□□□□□ -0.98
RPAIN-202ENST00000381208 TMEM183AQ8IXX5 376 aa8.9□□□□□ -0.98
RPAIN-202ENST00000381208 LINC00469Q8N7U9 141 aa8.9□□□□□ -0.98
RPAIN-202ENST00000381208 C8orf49Q96NF6 230 aa8.9□□□□□ -0.98
RPAIN-202ENST00000381208 TXNDC17Q9BRA2 123 aa8.9□□□□□ -0.98
RPAIN-202ENST00000381208 MDFICQ9P1T7 246 aa8.9□□□□□ -0.98
RPAIN-202ENST00000381208 RAB19A4D1S5 217 aa8.89□□□□□ -0.99
RPAIN-202ENST00000381208 C9JCJ5 164 aa8.89□□□□□ -0.99
RPAIN-202ENST00000381208 RAB5CP51148 216 aa8.89□□□□□ -0.99
RPAIN-202ENST00000381208 BLOC1S1P78537 153 aa8.89□□□□□ -0.99
RPAIN-202ENST00000381208 TOR2AQ5JU69 321 aa8.89□□□□□ -0.99
RPAIN-202ENST00000381208 UQCC3Q6UW78 93 aa8.89□□□□□ -0.99
RPAIN-202ENST00000381208 Q6ZQT7 251 aa8.89□□□□□ -0.99
RPAIN-202ENST00000381208 KCNS1Q96KK3 526 aa8.89□□□□□ -0.99
RPAIN-202ENST00000381208 NDFIP1Q9BT67 221 aa8.89□□□□□ -0.99
RPAIN-202ENST00000381208 HSPG2P98160 4391 aa8.89□□□□□ -0.99
RPAIN-202ENST00000381208 TRAV4A0A0B4J268 109 aa8.88□□□□□ -0.99
RPAIN-202ENST00000381208 TEX46H3BTG2 121 aa8.88□□□□□ -0.99
RPAIN-202ENST00000381208 M0R2P5 195 aa8.88□□□□□ -0.99
RPAIN-202ENST00000381208 CIDEAO60543 219 aa8.88□□□□□ -0.99
RPAIN-202ENST00000381208 SULT1A2P50226 295 aa8.88□□□□□ -0.99
RPAIN-202ENST00000381208 ERVFC1-1P60608 527 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms