RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 PAX4O43316 350 aa3.93□□□□□ -1.78
PTPRD-203ENST00000381196 ZNF138P52744 262 aa3.93□□□□□ -1.78
PTPRD-203ENST00000381196 RMI2Q96E14 147 aa3.93□□□□□ -1.78
PTPRD-203ENST00000381196 LINC00479Q96M42 142 aa3.93□□□□□ -1.78
PTPRD-203ENST00000381196 NBR2O15453 112 aa3.93□□□□□ -1.78
PTPRD-203ENST00000381196 INSP01308 110 aa3.93□□□□□ -1.78
PTPRD-203ENST00000381196 HERVK_113P63121 156 aa3.93□□□□□ -1.78
PTPRD-203ENST00000381196 PRR20EP86478 221 aa3.93□□□□□ -1.78
PTPRD-203ENST00000381196 PRR20CP86479 221 aa3.93□□□□□ -1.78
PTPRD-203ENST00000381196 PRR20DP86480 221 aa3.93□□□□□ -1.78
PTPRD-203ENST00000381196 PRR20BP86481 221 aa3.93□□□□□ -1.78
PTPRD-203ENST00000381196 PRR20AP86496 221 aa3.93□□□□□ -1.78
PTPRD-203ENST00000381196 C1orf122Q6ZSJ8 110 aa3.93□□□□□ -1.78
PTPRD-203ENST00000381196 LINC00574Q9H8X3 128 aa3.93□□□□□ -1.78
PTPRD-203ENST00000381196 IMMP1LQ96LU5 166 aa3.93□□□□□ -1.78
PTPRD-203ENST00000381196 GCN1Q92616 2671 aaKnown RBP3.93□□□□□ -1.78
PTPRD-203ENST00000381196 C12orf74Q32Q52 190 aa3.93□□□□□ -1.78
PTPRD-203ENST00000381196 UFSP1Q6NVU6 142 aa3.93□□□□□ -1.78
PTPRD-203ENST00000381196 FAM19A2Q8N3H0 131 aa3.93□□□□□ -1.78
PTPRD-203ENST00000381196 PRSS33Q8NF86 280 aa3.93□□□□□ -1.78
PTPRD-203ENST00000381196 IGHV3-35A0A0C4DH35 117 aa3.93□□□□□ -1.78
PTPRD-203ENST00000381196 NDUFA3O95167 84 aa3.93□□□□□ -1.78
PTPRD-203ENST00000381196 IGHG2P01859 326 aa3.93□□□□□ -1.78
PTPRD-203ENST00000381196 SAA2P0DJI9 122 aaPredicted RBP3.93□□□□□ -1.78
PTPRD-203ENST00000381196 IGFBP2P18065 325 aa3.93□□□□□ -1.78
PTPRD-203ENST00000381196 RNASE7Q9H1E1 156 aaKnown RBP3.93□□□□□ -1.78
PTPRD-203ENST00000381196 TRBV10-2A0A0K0K1G8 114 aa3.93□□□□□ -1.78
PTPRD-203ENST00000381196 H7C423 109 aa3.93□□□□□ -1.78
PTPRD-203ENST00000381196 MIR17HGQ75NE6 70 aa3.93□□□□□ -1.78
PTPRD-203ENST00000381196 VWCEQ96DN2 955 aa3.93□□□□□ -1.78
PTPRD-203ENST00000381196 Q96MF0 132 aa3.93□□□□□ -1.78
PTPRD-203ENST00000381196 P0C879 139 aa3.93□□□□□ -1.78
PTPRD-203ENST00000381196 ZC2HC1BQ5TFG8 222 aa3.93□□□□□ -1.78
PTPRD-203ENST00000381196 RNASE8Q8TDE3 154 aaKnown RBP3.93□□□□□ -1.78
PTPRD-203ENST00000381196 WISP1O95388 367 aa3.92□□□□□ -1.78
PTPRD-203ENST00000381196 TET2Q6N021 2002 aaPredicted RBP3.92□□□□□ -1.78
PTPRD-203ENST00000381196 LEAP2Q969E1 77 aa3.92□□□□□ -1.78
PTPRD-203ENST00000381196 NDUFA4L2Q9NRX3 87 aa3.92□□□□□ -1.78
PTPRD-203ENST00000381196 ZNF833PQ6ZTB9 187 aa3.92□□□□□ -1.78
PTPRD-203ENST00000381196 C18orf15Q96N68 181 aa3.92□□□□□ -1.78
PTPRD-203ENST00000381196 IGHV3-49A0A0A0MS15 119 aa3.92□□□□□ -1.78
PTPRD-203ENST00000381196 TMEM155Q4W5P6 130 aa3.92□□□□□ -1.78
PTPRD-203ENST00000381196 A4D1N5 150 aa3.92□□□□□ -1.78
PTPRD-203ENST00000381196 hDV102S1A0JD36 115 aa3.92□□□□□ -1.78
PTPRD-203ENST00000381196 IGHV1-2P23083 117 aa3.92□□□□□ -1.78
PTPRD-203ENST00000381196 GATA3P23771 443 aa3.92□□□□□ -1.78
PTPRD-203ENST00000381196 CNFNQ9BYD5 112 aa3.92□□□□□ -1.78
PTPRD-203ENST00000381196 A0A087X0K7 114 aa3.92□□□□□ -1.78
PTPRD-203ENST00000381196 PYYP10082 97 aa3.92□□□□□ -1.78
PTPRD-203ENST00000381196 FAM110DQ8TAY7 271 aaPredicted RBP3.92□□□□□ -1.78
PTPRD-203ENST00000381196 LINC01546A6NGU7 62 aa3.92□□□□□ -1.78
PTPRD-203ENST00000381196 TRBV19A0A075B6N1 114 aa3.91□□□□□ -1.78
PTPRD-203ENST00000381196 C17orf98A8MV24 154 aa3.91□□□□□ -1.78
PTPRD-203ENST00000381196 C9JQL5 133 aa3.91□□□□□ -1.78
PTPRD-203ENST00000381196 CLPSP04118 112 aa3.91□□□□□ -1.78
PTPRD-203ENST00000381196 CFC1BP0CG36 223 aa3.91□□□□□ -1.78
PTPRD-203ENST00000381196 CFC1P0CG37 223 aa3.91□□□□□ -1.78
PTPRD-203ENST00000381196 SEC61GP60059 68 aa3.91□□□□□ -1.78
PTPRD-203ENST00000381196 LOXL1Q08397 574 aaPredicted RBP3.91□□□□□ -1.78
PTPRD-203ENST00000381196 DSCAML1Q8TD84 2053 aa3.91□□□□□ -1.78
PTPRD-203ENST00000381196 RNASE4P34096 147 aaKnown RBP3.91□□□□□ -1.78
PTPRD-203ENST00000381196 RPL36AP83881 106 aaKnown RBP3.91□□□□□ -1.78
PTPRD-203ENST00000381196 CLEC19AQ6UXS0 136 aa3.91□□□□□ -1.78
PTPRD-203ENST00000381196 SH2D6Q7Z4S9 175 aa3.91□□□□□ -1.78
PTPRD-203ENST00000381196 C17orf82Q86X59 251 aaPredicted RBP3.91□□□□□ -1.78
PTPRD-203ENST00000381196 RPL36ALQ969Q0 106 aaKnown RBP3.91□□□□□ -1.78
PTPRD-203ENST00000381196 PCSK5Q92824 1860 aa3.91□□□□□ -1.78
PTPRD-203ENST00000381196 TRAV41A0A0B4J266 112 aa3.91□□□□□ -1.78
PTPRD-203ENST00000381196 UBE2BP63146 152 aa3.91□□□□□ -1.78
PTPRD-203ENST00000381196 Q0VFX4 171 aa3.91□□□□□ -1.78
PTPRD-203ENST00000381196 LYNX1G3V0Z9 82 aa3.91□□□□□ -1.78
PTPRD-203ENST00000381196 I3L3M4 83 aa3.91□□□□□ -1.78
PTPRD-203ENST00000381196 CTSBP07858 339 aa3.91□□□□□ -1.78
PTPRD-203ENST00000381196 LYNX1P0DP58 116 aa3.91□□□□□ -1.78
PTPRD-203ENST00000381196 PCNX3Q9H6A9 2034 aa3.91□□□□□ -1.78
PTPRD-203ENST00000381196 K7ERS5 55 aa3.91□□□□□ -1.78
PTPRD-203ENST00000381196 SS18Q15532 418 aa3.91□□□□□ -1.78
PTPRD-203ENST00000381196 ZNF672Q499Z4 452 aaPredicted RBP3.91□□□□□ -1.78
PTPRD-203ENST00000381196 EGR2P11161 476 aaPredicted RBP3.91□□□□□ -1.78
PTPRD-203ENST00000381196 ETDBQ3ZM63 59 aa3.91□□□□□ -1.78
PTPRD-203ENST00000381196 KLHL30-AS1Q8NEE0 82 aa3.91□□□□□ -1.78
PTPRD-203ENST00000381196 H3BRN7 92 aa3.91□□□□□ -1.78
PTPRD-203ENST00000381196 NKAPP1Q8N9T2 125 aa3.91□□□□□ -1.78
PTPRD-203ENST00000381196 TMEM133Q9H2Q1 129 aa3.91□□□□□ -1.78
PTPRD-203ENST00000381196 IGHV3-23P01764 117 aa3.91□□□□□ -1.78
PTPRD-203ENST00000381196 FAM201AQ5SY85 155 aa3.91□□□□□ -1.78
PTPRD-203ENST00000381196 ZC2HC1AQ96GY0 325 aa3.91□□□□□ -1.78
PTPRD-203ENST00000381196 ZMAT4Q9H898 229 aa3.91□□□□□ -1.78
PTPRD-203ENST00000381196 IGKV1D-13A0A0B4J2D9 117 aa3.9□□□□□ -1.78
PTPRD-203ENST00000381196 CD7P09564 240 aa3.9□□□□□ -1.78
PTPRD-203ENST00000381196 IGKV1-13P0DP09 117 aa3.9□□□□□ -1.78
PTPRD-203ENST00000381196 STAB1Q9NY15 2570 aa3.9□□□□□ -1.78
PTPRD-203ENST00000381196 TRBV10-3A0A0K0K1G6 114 aa3.9□□□□□ -1.78
PTPRD-203ENST00000381196 CD55P08174 381 aa3.9□□□□□ -1.78
PTPRD-203ENST00000381196 CR1LQ2VPA4 569 aa3.9□□□□□ -1.78
PTPRD-203ENST00000381196 LINC01620Q4KN68 170 aa3.9□□□□□ -1.78
PTPRD-203ENST00000381196 TRBV25-1A0A075B6N4 114 aa3.9□□□□□ -1.78
PTPRD-203ENST00000381196 C2orf70A6NJV1 201 aa3.9□□□□□ -1.78
PTPRD-203ENST00000381196 TRBV30A0A0K0K1B3 111 aa3.9□□□□□ -1.79
PTPRD-203ENST00000381196 RNASE2P10153 161 aaKnown RBP3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms