RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 Q8N6K4 173 aa9.64□□□□□ -0.87
CDX2-201ENST00000381020 ZNF418Q8TF45 676 aaPredicted RBP9.64□□□□□ -0.87
CDX2-201ENST00000381020 TMEM158Q8WZ71 300 aa9.64□□□□□ -0.87
CDX2-201ENST00000381020 SIGLEC8Q9NYZ4 499 aa9.64□□□□□ -0.87
CDX2-201ENST00000381020 MYCNOSP40205 109 aa9.64□□□□□ -0.87
CDX2-201ENST00000381020 C10orf99Q6UWK7 81 aa9.64□□□□□ -0.87
CDX2-201ENST00000381020 STPG4Q8N801 248 aa9.64□□□□□ -0.87
CDX2-201ENST00000381020 OR11H1Q8NG94 326 aa9.64□□□□□ -0.87
CDX2-201ENST00000381020 SMPXQ9UHP9 88 aa9.64□□□□□ -0.87
CDX2-201ENST00000381020 VPREB3Q9UKI3 123 aa9.64□□□□□ -0.87
CDX2-201ENST00000381020 NSUN5P1Q3KNT7 163 aa9.63□□□□□ -0.87
CDX2-201ENST00000381020 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.63□□□□□ -0.87
CDX2-201ENST00000381020 GNRH2O43555 120 aa9.63□□□□□ -0.87
CDX2-201ENST00000381020 ATP5LO75964 103 aa9.63□□□□□ -0.87
CDX2-201ENST00000381020 AVPP01185 164 aa9.63□□□□□ -0.87
CDX2-201ENST00000381020 HIST2H2BDQ6DRA6 164 aa9.62□□□□□ -0.87
CDX2-201ENST00000381020 OR2K2Q8NGT1 345 aa9.62□□□□□ -0.87
CDX2-201ENST00000381020 TMEM190Q8WZ59 177 aa9.62□□□□□ -0.87
CDX2-201ENST00000381020 RPL24P83731 157 aaKnown RBP9.62□□□□□ -0.87
CDX2-201ENST00000381020 SRSF1Q07955 248 aaKnown RBP eCLIP9.62□□□□□ -0.87
CDX2-201ENST00000381020 MBD6Q96DN6 1003 aa9.62□□□□□ -0.87
CDX2-201ENST00000381020 J3QLI3 93 aa9.62□□□□□ -0.87
CDX2-201ENST00000381020 IGLL1P15814 213 aa9.62□□□□□ -0.87
CDX2-201ENST00000381020 TP53TG3Q9ULZ0 132 aa9.62□□□□□ -0.87
CDX2-201ENST00000381020 A6NDX4 124 aa9.61□□□□□ -0.87
CDX2-201ENST00000381020 DUSP14O95147 198 aaKnown RBP9.61□□□□□ -0.87
CDX2-201ENST00000381020 PF4P02776 101 aa9.61□□□□□ -0.87
CDX2-201ENST00000381020 UBE2E2Q96LR5 201 aa9.61□□□□□ -0.87
CDX2-201ENST00000381020 A0A087X0K7 114 aa9.61□□□□□ -0.87
CDX2-201ENST00000381020 HOXD3P31249 432 aaPredicted RBP9.61□□□□□ -0.87
CDX2-201ENST00000381020 CRIP1P50238 77 aa9.61□□□□□ -0.87
CDX2-201ENST00000381020 EMP1P54849 157 aa9.61□□□□□ -0.87
CDX2-201ENST00000381020 TMEM170BQ5T4T1 132 aa9.61□□□□□ -0.87
CDX2-201ENST00000381020 FLNCQ14315 2725 aa9.61□□□□□ -0.87
CDX2-201ENST00000381020 SAMD13Q5VXD3 122 aa9.61□□□□□ -0.87
CDX2-201ENST00000381020 C16orf54Q6UWD8 224 aa9.61□□□□□ -0.87
CDX2-201ENST00000381020 NEGR1Q7Z3B1 354 aa9.61□□□□□ -0.87
CDX2-201ENST00000381020 ZNF843Q8N446 348 aa9.61□□□□□ -0.87
CDX2-201ENST00000381020 ZNF48Q96MX3 618 aaPredicted RBP9.61□□□□□ -0.87
CDX2-201ENST00000381020 ST20Q9HBF5 79 aa9.61□□□□□ -0.87
CDX2-201ENST00000381020 KNCNA6PVL3 124 aa9.61□□□□□ -0.87
CDX2-201ENST00000381020 MPV17L2Q567V2 206 aa9.61□□□□□ -0.87
CDX2-201ENST00000381020 DNLZQ5SXM8 178 aa9.61□□□□□ -0.87
CDX2-201ENST00000381020 DPH3P1Q9H4G8 78 aa9.61□□□□□ -0.87
CDX2-201ENST00000381020 SMAD5-AS1Q9Y6J3 95 aa9.61□□□□□ -0.87
CDX2-201ENST00000381020 VWC2LB2RUY7 222 aa9.6□□□□□ -0.87
CDX2-201ENST00000381020 J3QKU1 62 aa9.6□□□□□ -0.87
CDX2-201ENST00000381020 NUTF2P61970 127 aaKnown RBP9.6□□□□□ -0.87
CDX2-201ENST00000381020 LAGE3Q14657 143 aa9.6□□□□□ -0.87
CDX2-201ENST00000381020 GTSCR1Q86UQ5 136 aa9.6□□□□□ -0.87
CDX2-201ENST00000381020 C20orf144Q9BQM9 153 aa9.6□□□□□ -0.87
CDX2-201ENST00000381020 CFAP46Q8IYW2 2715 aa9.6□□□□□ -0.87
CDX2-201ENST00000381020 A6NDN8 102 aa9.6□□□□□ -0.87
CDX2-201ENST00000381020 IGLV2-11P01706 119 aa9.6□□□□□ -0.87
CDX2-201ENST00000381020 IGLC3P0DOY3 106 aa9.6□□□□□ -0.87
CDX2-201ENST00000381020 STHQ8IWL8 128 aa9.6□□□□□ -0.87
CDX2-201ENST00000381020 JMJD8Q96S16 334 aa9.6□□□□□ -0.87
CDX2-201ENST00000381020 MS4A6AQ9H2W1 248 aa9.6□□□□□ -0.87
CDX2-201ENST00000381020 OR11H12B2RN74 326 aa9.59□□□□□ -0.87
CDX2-201ENST00000381020 SLURP1P55000 103 aa9.59□□□□□ -0.87
CDX2-201ENST00000381020 KRTAP10-9P60411 292 aa9.59□□□□□ -0.87
CDX2-201ENST00000381020 HERVK_113P61574 105 aa9.59□□□□□ -0.87
CDX2-201ENST00000381020 OR11H2Q8NH07 326 aa9.59□□□□□ -0.87
CDX2-201ENST00000381020 MEGF9Q9H1U4 602 aa9.59□□□□□ -0.87
CDX2-201ENST00000381020 ZFAND3Q9H8U3 227 aa9.59□□□□□ -0.87
CDX2-201ENST00000381020 SAP30O75446 220 aa9.59□□□□□ -0.87
CDX2-201ENST00000381020 IGF1P05019 195 aa9.59□□□□□ -0.87
CDX2-201ENST00000381020 Q1RN00 199 aa9.59□□□□□ -0.87
CDX2-201ENST00000381020 OR1N2Q8NGR9 330 aa9.59□□□□□ -0.87
CDX2-201ENST00000381020 ZNF876PQ49A33 203 aa9.59□□□□□ -0.87
CDX2-201ENST00000381020 TEX43Q6ZNM6 134 aa9.59□□□□□ -0.87
CDX2-201ENST00000381020 Q6ZVH6 145 aa9.59□□□□□ -0.87
CDX2-201ENST00000381020 ARL6IP6Q8N6S5 226 aa9.59□□□□□ -0.87
CDX2-201ENST00000381020 HIST1H4GQ99525 98 aa9.59□□□□□ -0.87
CDX2-201ENST00000381020 CSTL1Q9H114 145 aa9.59□□□□□ -0.87
CDX2-201ENST00000381020 TNFRSF18Q9Y5U5 241 aa9.59□□□□□ -0.87
CDX2-201ENST00000381020 BBC3Q96PG8 261 aaPredicted RBP9.58□□□□□ -0.88
CDX2-201ENST00000381020 A0A1B0GXF2 115 aa9.58□□□□□ -0.88
CDX2-201ENST00000381020 KLF5Q13887 457 aaPredicted RBP9.58□□□□□ -0.88
CDX2-201ENST00000381020 GAGE10A6NGK3 116 aa9.58□□□□□ -0.88
CDX2-201ENST00000381020 H3BUA1 57 aa9.58□□□□□ -0.88
CDX2-201ENST00000381020 SCGB1C2P0DMR2 95 aa9.58□□□□□ -0.88
CDX2-201ENST00000381020 RRN3P1Q2M238 152 aa9.58□□□□□ -0.88
CDX2-201ENST00000381020 SFTA2Q6UW10 78 aa9.58□□□□□ -0.88
CDX2-201ENST00000381020 XCL2Q9UBD3 114 aa9.58□□□□□ -0.88
CDX2-201ENST00000381020 PAX2Q02962 417 aa9.57□□□□□ -0.88
CDX2-201ENST00000381020 IGHV4OR15-8A0A075B7B6 117 aa9.57□□□□□ -0.88
CDX2-201ENST00000381020 A0A087WW49 117 aa9.57□□□□□ -0.88
CDX2-201ENST00000381020 PPP1R17O96001 155 aa9.57□□□□□ -0.88
CDX2-201ENST00000381020 ELANEP08246 267 aa9.57□□□□□ -0.88
CDX2-201ENST00000381020 ZC2HC1BQ5TFG8 222 aa9.57□□□□□ -0.88
CDX2-201ENST00000381020 C2orf88Q9BSF0 95 aa9.57□□□□□ -0.88
CDX2-201ENST00000381020 F8W735 103 aaPredicted RBP9.57□□□□□ -0.88
CDX2-201ENST00000381020 H7C2G1 150 aa9.57□□□□□ -0.88
CDX2-201ENST00000381020 DPM2O94777 84 aa9.57□□□□□ -0.88
CDX2-201ENST00000381020 IGKV3OR2-268A0A0C4DH90 116 aa9.56□□□□□ -0.88
CDX2-201ENST00000381020 ORMDL2Q53FV1 153 aa9.56□□□□□ -0.88
CDX2-201ENST00000381020 WFDC11Q8NEX6 87 aa9.56□□□□□ -0.88
CDX2-201ENST00000381020 CYSLTR1Q9Y271 337 aa9.56□□□□□ -0.88
CDX2-201ENST00000381020 NPIPB6E9PJ23 425 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms