RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 TMEM8BA6NDV4 472 aa12.45□□□□□ -0.42
NKX3-1-201ENST00000380871 SIVA1O15304 175 aa12.44□□□□□ -0.42
NKX3-1-201ENST00000380871 IGF1P05019 195 aa12.44□□□□□ -0.42
NKX3-1-201ENST00000380871 NXT2Q9NPJ8 142 aaKnown RBP12.44□□□□□ -0.42
NKX3-1-201ENST00000380871 IGLV2-18A0A075B6J9 118 aa12.44□□□□□ -0.42
NKX3-1-201ENST00000380871 IGKCP01834 107 aa12.44□□□□□ -0.42
NKX3-1-201ENST00000380871 CLEC2AQ6UVW9 174 aa12.44□□□□□ -0.42
NKX3-1-201ENST00000380871 PIMREGQ9BSJ6 248 aa12.44□□□□□ -0.42
NKX3-1-201ENST00000380871 CHAC1Q9BUX1 264 aa12.44□□□□□ -0.42
NKX3-1-201ENST00000380871 ZMAT4Q9H898 229 aa12.44□□□□□ -0.42
NKX3-1-201ENST00000380871 PTPN13Q12923 2485 aa12.44□□□□□ -0.42
NKX3-1-201ENST00000380871 IGHV7-4-1A0A0J9YVY3 117 aa12.43□□□□□ -0.42
NKX3-1-201ENST00000380871 SCGB2A1O75556 95 aa12.43□□□□□ -0.42
NKX3-1-201ENST00000380871 SMIM17P0DL12 118 aa12.43□□□□□ -0.42
NKX3-1-201ENST00000380871 DEFB1P60022 68 aa12.43□□□□□ -0.42
NKX3-1-201ENST00000380871 FAM110DQ8TAY7 271 aaPredicted RBP12.43□□□□□ -0.42
NKX3-1-201ENST00000380871 MRPL35Q9NZE8 188 aaKnown RBP12.43□□□□□ -0.42
NKX3-1-201ENST00000380871 CREBBPQ92793 2442 aa12.43□□□□□ -0.42
NKX3-1-201ENST00000380871 ABCA12Q86UK0 2595 aa12.43□□□□□ -0.42
NKX3-1-201ENST00000380871 TRBV25-1A0A075B6N4 114 aa12.43□□□□□ -0.42
NKX3-1-201ENST00000380871 LINC01546A6NGU7 62 aa12.43□□□□□ -0.42
NKX3-1-201ENST00000380871 GOSR1O95249 250 aa12.43□□□□□ -0.42
NKX3-1-201ENST00000380871 H3BUX3 64 aa12.42□□□□□ -0.42
NKX3-1-201ENST00000380871 RPL11P62913 178 aaKnown RBP12.42□□□□□ -0.42
NKX3-1-201ENST00000380871 PRR9Q5T870 116 aa12.42□□□□□ -0.42
NKX3-1-201ENST00000380871 ARL6IP6Q8N6S5 226 aa12.42□□□□□ -0.42
NKX3-1-201ENST00000380871 AGRNO00468 2067 aa12.42□□□□□ -0.42
NKX3-1-201ENST00000380871 C8orf86Q6ZUL3 223 aa12.42□□□□□ -0.42
NKX3-1-201ENST00000380871 MAPKAPK5-AS1Q8N8E1 139 aa12.42□□□□□ -0.42
NKX3-1-201ENST00000380871 NRACQ8N912 160 aa12.42□□□□□ -0.42
NKX3-1-201ENST00000380871 CSTL1Q9H114 145 aa12.42□□□□□ -0.42
NKX3-1-201ENST00000380871 CELSR2Q9HCU4 2923 aa12.42□□□□□ -0.42
NKX3-1-201ENST00000380871 IGHV1-69DA0A0B4J2H0 117 aa12.41□□□□□ -0.42
NKX3-1-201ENST00000380871 IGHV1-69P01742 117 aa12.41□□□□□ -0.42
NKX3-1-201ENST00000380871 BLCAPP62952 87 aa12.41□□□□□ -0.42
NKX3-1-201ENST00000380871 SRSF2Q01130 221 aaKnown RBP12.41□□□□□ -0.42
NKX3-1-201ENST00000380871 SAMD5Q5TGI4 173 aa12.41□□□□□ -0.42
NKX3-1-201ENST00000380871 Q6ZS46 218 aa12.41□□□□□ -0.42
NKX3-1-201ENST00000380871 Q8N8P6 123 aa12.41□□□□□ -0.42
NKX3-1-201ENST00000380871 TLN2Q9Y4G6 2542 aa12.41□□□□□ -0.42
NKX3-1-201ENST00000380871 H3BVH4 76 aa12.41□□□□□ -0.42
NKX3-1-201ENST00000380871 TRBV12-3P01733 135 aa12.41□□□□□ -0.42
NKX3-1-201ENST00000380871 SMIM15Q7Z3B0 74 aa12.41□□□□□ -0.42
NKX3-1-201ENST00000380871 C5orf56Q8N8D9 126 aa12.41□□□□□ -0.42
NKX3-1-201ENST00000380871 KLK15Q9H2R5 256 aa12.41□□□□□ -0.42
NKX3-1-201ENST00000380871 NHP2Q9NX24 153 aaKnown RBP12.41□□□□□ -0.42
NKX3-1-201ENST00000380871 EPG5Q9HCE0 2579 aa12.4□□□□□ -0.42
NKX3-1-201ENST00000380871 TRAV41A0A0B4J266 112 aa12.4□□□□□ -0.42
NKX3-1-201ENST00000380871 DPM2O94777 84 aa12.4□□□□□ -0.42
NKX3-1-201ENST00000380871 ATP5G2Q06055 141 aa12.4□□□□□ -0.42
NKX3-1-201ENST00000380871 TMEM78Q5T7P6 136 aa12.4□□□□□ -0.42
NKX3-1-201ENST00000380871 PF4V1P10720 104 aa12.4□□□□□ -0.42
NKX3-1-201ENST00000380871 NPFFR1Q9GZQ6 430 aa12.4□□□□□ -0.42
NKX3-1-201ENST00000380871 SMIM13P0DJ93 91 aa12.4□□□□□ -0.43
NKX3-1-201ENST00000380871 EEF1AKMT3Q96AZ1 226 aa12.4□□□□□ -0.43
NKX3-1-201ENST00000380871 SPANXN1Q5VSR9 72 aa12.39□□□□□ -0.43
NKX3-1-201ENST00000380871 FABP2P12104 132 aa12.39□□□□□ -0.43
NKX3-1-201ENST00000380871 HIF1ANQ9NWT6 349 aa12.39□□□□□ -0.43
NKX3-1-201ENST00000380871 NEGR1Q7Z3B1 354 aa12.38□□□□□ -0.43
NKX3-1-201ENST00000380871 SLC50A1Q9BRV3 221 aa12.38□□□□□ -0.43
NKX3-1-201ENST00000380871 G3V4G9 280 aa12.38□□□□□ -0.43
NKX3-1-201ENST00000380871 TMEM95Q3KNT9 176 aa12.38□□□□□ -0.43
NKX3-1-201ENST00000380871 C10orf105Q8TEF2 133 aa12.38□□□□□ -0.43
NKX3-1-201ENST00000380871 C20orf173Q96LM9 149 aa12.38□□□□□ -0.43
NKX3-1-201ENST00000380871 MOB4Q9Y3A3 225 aa12.38□□□□□ -0.43
NKX3-1-201ENST00000380871 RBAKDNA6NC62 111 aa12.38□□□□□ -0.43
NKX3-1-201ENST00000380871 PHLDA1Q8WV24 401 aaPredicted RBP12.38□□□□□ -0.43
NKX3-1-201ENST00000380871 SRD5A1P18405 259 aa12.37□□□□□ -0.43
NKX3-1-201ENST00000380871 LAGE3Q14657 143 aa12.37□□□□□ -0.43
NKX3-1-201ENST00000380871 METTL26Q96S19 204 aa12.37□□□□□ -0.43
NKX3-1-201ENST00000380871 AVPP01185 164 aa12.37□□□□□ -0.43
NKX3-1-201ENST00000380871 PIFOQ8TCI5 191 aa12.37□□□□□ -0.43
NKX3-1-201ENST00000380871 DEFB104AQ8WTQ1 72 aa12.37□□□□□ -0.43
NKX3-1-201ENST00000380871 CSMD2Q7Z408 3487 aa12.37□□□□□ -0.43
NKX3-1-201ENST00000380871 M0R381 172 aa12.36□□□□□ -0.43
NKX3-1-201ENST00000380871 ATP5LO75964 103 aa12.36□□□□□ -0.43
NKX3-1-201ENST00000380871 UNQ9165/PRO28630Q6UXU0 137 aa12.36□□□□□ -0.43
NKX3-1-201ENST00000380871 MYOZ3Q8TDC0 251 aa12.36□□□□□ -0.43
NKX3-1-201ENST00000380871 C16orf92Q96LL3 132 aa12.36□□□□□ -0.43
NKX3-1-201ENST00000380871 HIGD1BQ9P298 99 aa12.36□□□□□ -0.43
NKX3-1-201ENST00000380871 ZANQ9Y493 2812 aa12.35□□□□□ -0.43
NKX3-1-201ENST00000380871 ARL3P36405 182 aa12.35□□□□□ -0.43
NKX3-1-201ENST00000380871 CEND1Q8N111 149 aa12.35□□□□□ -0.43
NKX3-1-201ENST00000380871 NAV2Q8IVL1 2488 aa12.35□□□□□ -0.43
NKX3-1-201ENST00000380871 SORL1Q92673 2214 aa12.35□□□□□ -0.43
NKX3-1-201ENST00000380871 RPL24P83731 157 aaKnown RBP12.35□□□□□ -0.43
NKX3-1-201ENST00000380871 MTURNQ8N3F0 131 aa12.35□□□□□ -0.43
NKX3-1-201ENST00000380871 RPL39LQ96EH5 51 aaKnown RBP12.35□□□□□ -0.43
NKX3-1-201ENST00000380871 ANKRD17O75179 2603 aaKnown RBP12.34□□□□□ -0.43
NKX3-1-201ENST00000380871 OR5A1Q8NGJ0 315 aa12.34□□□□□ -0.43
NKX3-1-201ENST00000380871 GLMPQ8WWB7 406 aa12.34□□□□□ -0.43
NKX3-1-201ENST00000380871 TEX48A0A1B0GUV7 120 aa12.34□□□□□ -0.43
NKX3-1-201ENST00000380871 MSMBP08118 114 aa12.34□□□□□ -0.43
NKX3-1-201ENST00000380871 RAB9AP51151 201 aa12.34□□□□□ -0.43
NKX3-1-201ENST00000380871 SONP18583 2426 aaKnown RBP12.33□□□□□ -0.43
NKX3-1-201ENST00000380871 C9orf47Q6ZRZ4 202 aa12.33□□□□□ -0.44
NKX3-1-201ENST00000380871 USP24Q9UPU5 2620 aa12.33□□□□□ -0.44
NKX3-1-201ENST00000380871 A0A087WX48 190 aa12.33□□□□□ -0.44
NKX3-1-201ENST00000380871 WFDC12Q8WWY7 111 aa12.33□□□□□ -0.44
NKX3-1-201ENST00000380871 F6UB75 175 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms