RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 DAZ1Q9NQZ3 744 aaKnown RBP16.37■□□□□ 0.21
TRIM54-202ENST00000380075 MUC21A0A0G2JKD1 596 aa16.36■□□□□ 0.21
TRIM54-202ENST00000380075 MUC21A0A140T8X8 626 aa16.36■□□□□ 0.21
TRIM54-202ENST00000380075 IFI27P40305 119 aaPredicted RBP16.36■□□□□ 0.21
TRIM54-202ENST00000380075 NUTF2P61970 127 aaKnown RBP16.36■□□□□ 0.21
TRIM54-202ENST00000380075 MUC21Q5SSG8 566 aa16.36■□□□□ 0.21
TRIM54-202ENST00000380075 LINC00469Q8N7U9 141 aa16.36■□□□□ 0.21
TRIM54-202ENST00000380075 C20orf173Q96LM9 149 aa16.36■□□□□ 0.21
TRIM54-202ENST00000380075 PEF1Q9UBV8 284 aaKnown RBP16.36■□□□□ 0.21
TRIM54-202ENST00000380075 SRD5A1P18405 259 aa16.35■□□□□ 0.21
TRIM54-202ENST00000380075 SSTP61278 116 aa16.35■□□□□ 0.21
TRIM54-202ENST00000380075 SAMD13Q5VXD3 122 aa16.35■□□□□ 0.21
TRIM54-202ENST00000380075 IGHV4-59P01825 116 aa16.35■□□□□ 0.21
TRIM54-202ENST00000380075 PSMB8P28062 276 aa16.35■□□□□ 0.21
TRIM54-202ENST00000380075 TRBV7-9A0A0J9YWB2 115 aa16.34■□□□□ 0.21
TRIM54-202ENST00000380075 FAM106AQ4KMX7 169 aa16.34■□□□□ 0.21
TRIM54-202ENST00000380075 Q6ZN92 141 aa16.34■□□□□ 0.21
TRIM54-202ENST00000380075 RNF185Q96GF1 192 aa16.34■□□□□ 0.21
TRIM54-202ENST00000380075 ZNF747Q9BV97 191 aa16.34■□□□□ 0.21
TRIM54-202ENST00000380075 RHPN1-AS1Q9BWJ2 59 aa16.34■□□□□ 0.21
TRIM54-202ENST00000380075 ST20Q9HBF5 79 aa16.34■□□□□ 0.21
TRIM54-202ENST00000380075 C11orf21Q9P2W6 132 aa16.34■□□□□ 0.21
TRIM54-202ENST00000380075 HNRNPA3P51991 378 aaKnown RBP16.33■□□□□ 0.21
TRIM54-202ENST00000380075 IGHV4-4A0A075B6R2 117 aa16.33■□□□□ 0.2
TRIM54-202ENST00000380075 IGLL1P15814 213 aa16.33■□□□□ 0.2
TRIM54-202ENST00000380075 CACNG7P62955 275 aa16.33■□□□□ 0.2
TRIM54-202ENST00000380075 LINC01545Q5VT33 79 aa16.33■□□□□ 0.2
TRIM54-202ENST00000380075 SMPXQ9UHP9 88 aa16.33■□□□□ 0.2
TRIM54-202ENST00000380075 SNAI2O43623 268 aa16.32■□□□□ 0.2
TRIM54-202ENST00000380075 TCF21O43680 179 aa16.32■□□□□ 0.2
TRIM54-202ENST00000380075 MAJINQ3KP22 176 aa16.32■□□□□ 0.2
TRIM54-202ENST00000380075 SMIM15Q7Z3B0 74 aa16.32■□□□□ 0.2
TRIM54-202ENST00000380075 MSRB1Q9NZV6 116 aa16.32■□□□□ 0.2
TRIM54-202ENST00000380075 LOC389332A0A1B0GUA5 103 aa16.31■□□□□ 0.2
TRIM54-202ENST00000380075 HSBP1L1C9JCN9 74 aa16.31■□□□□ 0.2
TRIM54-202ENST00000380075 NPYP01303 97 aa16.31■□□□□ 0.2
TRIM54-202ENST00000380075 MAP1LC3AQ9H492 121 aa16.31■□□□□ 0.2
TRIM54-202ENST00000380075 MRPS16Q9Y3D3 137 aaKnown RBP16.31■□□□□ 0.2
TRIM54-202ENST00000380075 FOXE3Q13461 319 aa16.31■□□□□ 0.2
TRIM54-202ENST00000380075 UFC1Q9Y3C8 167 aa16.31■□□□□ 0.2
TRIM54-202ENST00000380075 TRAV21A0A0B4J279 112 aa16.3■□□□□ 0.2
TRIM54-202ENST00000380075 HBDP02042 147 aa16.3■□□□□ 0.2
TRIM54-202ENST00000380075 LCNL1Q6ZST4 164 aa16.3■□□□□ 0.2
TRIM54-202ENST00000380075 A0A096LNJ9 63 aa16.29■□□□□ 0.2
TRIM54-202ENST00000380075 LINC01546A6NGU7 62 aa16.29■□□□□ 0.2
TRIM54-202ENST00000380075 RPLP1P05386 114 aaKnown RBP16.29■□□□□ 0.2
TRIM54-202ENST00000380075 RPL11P62913 178 aaKnown RBP16.29■□□□□ 0.2
TRIM54-202ENST00000380075 TM4SF20Q53R12 229 aa16.29■□□□□ 0.2
TRIM54-202ENST00000380075 ZFAND2AQ8N6M9 145 aa16.29■□□□□ 0.2
TRIM54-202ENST00000380075 VPREB3Q9UKI3 123 aa16.29■□□□□ 0.2
TRIM54-202ENST00000380075 FAM19A4Q96LR4 140 aa16.29■□□□□ 0.2
TRIM54-202ENST00000380075 MS4A6AQ9H2W1 248 aa16.29■□□□□ 0.2
TRIM54-202ENST00000380075 NXT2Q9NPJ8 142 aaKnown RBP16.29■□□□□ 0.2
TRIM54-202ENST00000380075 NF1P21359 2839 aa16.28■□□□□ 0.2
TRIM54-202ENST00000380075 TSPOP30536 169 aa16.28■□□□□ 0.2
TRIM54-202ENST00000380075 APRG1Q8IVJ8 170 aa16.28■□□□□ 0.2
TRIM54-202ENST00000380075 OR8A1Q8NGG7 326 aa16.28■□□□□ 0.2
TRIM54-202ENST00000380075 SETD2Q9BYW2 2564 aaPredicted RBP16.28■□□□□ 0.2
TRIM54-202ENST00000380075 SMKR1H3BMG3 65 aa16.27■□□□□ 0.2
TRIM54-202ENST00000380075 ID1P41134 155 aa16.27■□□□□ 0.2
TRIM54-202ENST00000380075 TMEM95Q3KNT9 176 aa16.27■□□□□ 0.2
TRIM54-202ENST00000380075 NCR2O95944 276 aa16.27■□□□□ 0.19
TRIM54-202ENST00000380075 PRR9Q5T870 116 aa16.27■□□□□ 0.19
TRIM54-202ENST00000380075 Q6YL49 198 aa16.27■□□□□ 0.19
TRIM54-202ENST00000380075 TIMM8BQ9Y5J9 83 aaPredicted RBP16.26■□□□□ 0.19
TRIM54-202ENST00000380075 TNFRSF6BO95407 300 aa16.26■□□□□ 0.19
TRIM54-202ENST00000380075 MED14OSP0DP75 135 aa16.26■□□□□ 0.19
TRIM54-202ENST00000380075 SCGB2A2Q13296 93 aa16.26■□□□□ 0.19
TRIM54-202ENST00000380075 COL5A1-AS1Q5SY13 56 aa16.26■□□□□ 0.19
TRIM54-202ENST00000380075 SPANXN1Q5VSR9 72 aa16.26■□□□□ 0.19
TRIM54-202ENST00000380075 ELANEP08246 267 aa16.24■□□□□ 0.19
TRIM54-202ENST00000380075 DEFB125Q8N687 156 aa16.24■□□□□ 0.19
TRIM54-202ENST00000380075 LGALS9BQ3B8N2 356 aa16.24■□□□□ 0.19
TRIM54-202ENST00000380075 LGALS9CQ6DKI2 356 aa16.24■□□□□ 0.19
TRIM54-202ENST00000380075 PRSS47A8MTI9 375 aa16.23■□□□□ 0.19
TRIM54-202ENST00000380075 TCAPO15273 167 aa16.23■□□□□ 0.19
TRIM54-202ENST00000380075 hDV102S1A0JD36 115 aa16.22■□□□□ 0.19
TRIM54-202ENST00000380075 H0Y8G0 127 aa16.22■□□□□ 0.19
TRIM54-202ENST00000380075 EVI2AP22794 236 aa16.22■□□□□ 0.19
TRIM54-202ENST00000380075 MYOZ3Q8TDC0 251 aa16.22■□□□□ 0.19
TRIM54-202ENST00000380075 H3BVH4 76 aa16.22■□□□□ 0.19
TRIM54-202ENST00000380075 ASIPP42127 132 aa16.22■□□□□ 0.19
TRIM54-202ENST00000380075 BATFQ16520 125 aa16.22■□□□□ 0.19
TRIM54-202ENST00000380075 DPF1Q92782 380 aa16.22■□□□□ 0.19
TRIM54-202ENST00000380075 Q8N8P6 123 aa16.21■□□□□ 0.19
TRIM54-202ENST00000380075 OR2K2Q8NGT1 345 aa16.21■□□□□ 0.19
TRIM54-202ENST00000380075 DCANP1Q8TF63 244 aa16.21■□□□□ 0.19
TRIM54-202ENST00000380075 IFI27L1Q96BM0 104 aa16.21■□□□□ 0.19
TRIM54-202ENST00000380075 MRAP2Q96G30 205 aa16.21■□□□□ 0.19
TRIM54-202ENST00000380075 JMJD1CQ15652 2540 aa16.2■□□□□ 0.18
TRIM54-202ENST00000380075 LGALS1P09382 135 aaKnown RBP16.2■□□□□ 0.18
TRIM54-202ENST00000380075 FCER1GP30273 86 aa16.2■□□□□ 0.18
TRIM54-202ENST00000380075 SLC25A34Q6PIV7 304 aa16.2■□□□□ 0.18
TRIM54-202ENST00000380075 Q6ZQT7 251 aa16.2■□□□□ 0.18
TRIM54-202ENST00000380075 SCRT2Q9NQ03 307 aa16.2■□□□□ 0.18
TRIM54-202ENST00000380075 LGALS9O00182 355 aa16.2■□□□□ 0.18
TRIM54-202ENST00000380075 ZNF418Q8TF45 676 aaPredicted RBP16.2■□□□□ 0.18
TRIM54-202ENST00000380075 DUX5Q96PT3 197 aa16.2■□□□□ 0.18
TRIM54-202ENST00000380075 ZNF702PQ9H963 129 aa16.2■□□□□ 0.18
TRIM54-202ENST00000380075 GOLT1BQ9Y3E0 138 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms