RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 LINC00311Q8N616 119 aa5.78□□□□□ -1.48
CDKL5-201ENST00000379989 PRO1854Q9UHT4 67 aa5.78□□□□□ -1.48
CDKL5-201ENST00000379989 HOXB4P17483 251 aaPredicted RBP5.78□□□□□ -1.48
CDKL5-201ENST00000379989 C2orf83Q53S99 150 aa5.78□□□□□ -1.48
CDKL5-201ENST00000379989 Q8N8P6 123 aa5.78□□□□□ -1.48
CDKL5-201ENST00000379989 FAM19A4Q96LR4 140 aa5.78□□□□□ -1.48
CDKL5-201ENST00000379989 S1PR3Q99500 378 aa5.78□□□□□ -1.48
CDKL5-201ENST00000379989 RS1O15537 224 aa5.78□□□□□ -1.48
CDKL5-201ENST00000379989 RNASE2P10153 161 aaKnown RBP5.78□□□□□ -1.48
CDKL5-201ENST00000379989 NXT2Q9NPJ8 142 aaKnown RBP5.78□□□□□ -1.48
CDKL5-201ENST00000379989 RPUSD1Q9UJJ7 312 aaKnown RBP5.78□□□□□ -1.48
CDKL5-201ENST00000379989 PYGO1Q9Y3Y4 419 aa5.78□□□□□ -1.48
CDKL5-201ENST00000379989 C17orf100A8MU93 164 aa5.77□□□□□ -1.49
CDKL5-201ENST00000379989 COX6B1P14854 86 aa5.77□□□□□ -1.49
CDKL5-201ENST00000379989 CNTFRP26992 372 aa5.77□□□□□ -1.49
CDKL5-201ENST00000379989 RNASE6Q93091 150 aaKnown RBP5.77□□□□□ -1.49
CDKL5-201ENST00000379989 AHCTF1Q8WYP5 2266 aa5.77□□□□□ -1.49
CDKL5-201ENST00000379989 NAV3Q8IVL0 2385 aa5.77□□□□□ -1.49
CDKL5-201ENST00000379989 IGKV1D-37A0A075B6S9 117 aa5.77□□□□□ -1.49
CDKL5-201ENST00000379989 A0A0G2JNJ9 132 aa5.77□□□□□ -1.49
CDKL5-201ENST00000379989 TRBV10-2A0A0K0K1G8 114 aa5.77□□□□□ -1.49
CDKL5-201ENST00000379989 F8VRH5 84 aa5.77□□□□□ -1.49
CDKL5-201ENST00000379989 PRB4P10163 310 aaPredicted RBP5.77□□□□□ -1.49
CDKL5-201ENST00000379989 GP9P14770 177 aa5.77□□□□□ -1.49
CDKL5-201ENST00000379989 PRCDQ00LT1 54 aa5.77□□□□□ -1.49
CDKL5-201ENST00000379989 C1orf229Q6ZS94 237 aaPredicted RBP5.77□□□□□ -1.49
CDKL5-201ENST00000379989 LINC00336Q6ZUF6 198 aa5.77□□□□□ -1.49
CDKL5-201ENST00000379989 Q8NA96 180 aa5.77□□□□□ -1.49
CDKL5-201ENST00000379989 RNF185Q96GF1 192 aa5.77□□□□□ -1.49
CDKL5-201ENST00000379989 Q9UFV3 132 aa5.77□□□□□ -1.49
CDKL5-201ENST00000379989 PKIGQ9Y2B9 76 aa5.77□□□□□ -1.49
CDKL5-201ENST00000379989 DNAJC13O75165 2243 aa5.77□□□□□ -1.49
CDKL5-201ENST00000379989 IGKV1D-17A0A075B6S4 117 aa5.76□□□□□ -1.49
CDKL5-201ENST00000379989 IGHV3-64DA0A0J9YX35 117 aa5.76□□□□□ -1.49
CDKL5-201ENST00000379989 EIF4EBP3O60516 100 aaPredicted RBP5.76□□□□□ -1.49
CDKL5-201ENST00000379989 IGHV1-46P01743 117 aa5.76□□□□□ -1.49
CDKL5-201ENST00000379989 TRACP01848 142 aa5.76□□□□□ -1.49
CDKL5-201ENST00000379989 TFF1P04155 84 aa5.76□□□□□ -1.49
CDKL5-201ENST00000379989 TMEM258P61165 79 aa5.76□□□□□ -1.49
CDKL5-201ENST00000379989 CD177Q8N6Q3 437 aa5.76□□□□□ -1.49
CDKL5-201ENST00000379989 FREM2Q5SZK8 3169 aa5.76□□□□□ -1.49
CDKL5-201ENST00000379989 FRYQ5TBA9 3013 aa5.76□□□□□ -1.49
CDKL5-201ENST00000379989 IGHV3-48P01763 117 aa5.76□□□□□ -1.49
CDKL5-201ENST00000379989 IGHV3-30P01768 117 aa5.76□□□□□ -1.49
CDKL5-201ENST00000379989 ATP5G1P05496 136 aa5.76□□□□□ -1.49
CDKL5-201ENST00000379989 P0DMU3 169 aa5.76□□□□□ -1.49
CDKL5-201ENST00000379989 FAM231AP0DMU4 169 aa5.76□□□□□ -1.49
CDKL5-201ENST00000379989 FAM231CP0DMU5 169 aa5.76□□□□□ -1.49
CDKL5-201ENST00000379989 IGHV3-30-5P0DP03 117 aa5.76□□□□□ -1.49
CDKL5-201ENST00000379989 SLC25A16P16260 332 aa5.76□□□□□ -1.49
CDKL5-201ENST00000379989 HOXA4Q00056 320 aaPredicted RBP5.76□□□□□ -1.49
CDKL5-201ENST00000379989 IGLV2-18A0A075B6J9 118 aa5.76□□□□□ -1.49
CDKL5-201ENST00000379989 TRAV41A0A0B4J266 112 aa5.76□□□□□ -1.49
CDKL5-201ENST00000379989 GATA1P15976 413 aaPredicted RBP5.76□□□□□ -1.49
CDKL5-201ENST00000379989 ATXN8Q156A1 80 aa5.76□□□□□ -1.49
CDKL5-201ENST00000379989 LCE2DQ5TA82 110 aaPredicted RBP5.76□□□□□ -1.49
CDKL5-201ENST00000379989 EXOC3-AS1Q8N2X6 119 aa5.76□□□□□ -1.49
CDKL5-201ENST00000379989 DCTN5Q9BTE1 182 aa5.76□□□□□ -1.49
CDKL5-201ENST00000379989 SLC25A39Q9BZJ4 359 aaPredicted RBP5.76□□□□□ -1.49
CDKL5-201ENST00000379989 ZNF256Q9Y2P7 627 aaPredicted RBP5.76□□□□□ -1.49
CDKL5-201ENST00000379989 A0A0J9YY99 117 aa5.75□□□□□ -1.49
CDKL5-201ENST00000379989 H7C1H1 209 aa5.75□□□□□ -1.49
CDKL5-201ENST00000379989 IGHV3-33P01772 117 aa5.75□□□□□ -1.49
CDKL5-201ENST00000379989 IGHV4-39P01824 125 aa5.75□□□□□ -1.49
CDKL5-201ENST00000379989 RNF152Q8N8N0 203 aa5.75□□□□□ -1.49
CDKL5-201ENST00000379989 KLHL30-AS1Q8NEE0 82 aa5.75□□□□□ -1.49
CDKL5-201ENST00000379989 SCNM1Q9BWG6 230 aa5.75□□□□□ -1.49
CDKL5-201ENST00000379989 SPANXDQ9BXN6 97 aa5.75□□□□□ -1.49
CDKL5-201ENST00000379989 NBEAQ8NFP9 2946 aa5.75□□□□□ -1.49
CDKL5-201ENST00000379989 ZGRF1Q86YA3 2104 aa5.75□□□□□ -1.49
CDKL5-201ENST00000379989 TRBV6-1A0A0K0K1D8 114 aa5.75□□□□□ -1.49
CDKL5-201ENST00000379989 LOXL3P58215 753 aa5.75□□□□□ -1.49
CDKL5-201ENST00000379989 DEFB121Q5J5C9 76 aa5.75□□□□□ -1.49
CDKL5-201ENST00000379989 Q6ZS46 218 aa5.75□□□□□ -1.49
CDKL5-201ENST00000379989 TMEM86BQ8N661 226 aa5.75□□□□□ -1.49
CDKL5-201ENST00000379989 OTORQ9NRC9 128 aa5.75□□□□□ -1.49
CDKL5-201ENST00000379989 MRPL36Q9P0J6 103 aaKnown RBP5.75□□□□□ -1.49
CDKL5-201ENST00000379989 GNG12Q9UBI6 72 aa5.75□□□□□ -1.49
CDKL5-201ENST00000379989 C2orf82Q6UX34 121 aa5.75□□□□□ -1.49
CDKL5-201ENST00000379989 SMCR5Q8TEV8 140 aa5.75□□□□□ -1.49
CDKL5-201ENST00000379989 RNF5Q99942 180 aa5.75□□□□□ -1.49
CDKL5-201ENST00000379989 ARFGEF3Q5TH69 2177 aa5.74□□□□□ -1.49
CDKL5-201ENST00000379989 ENSAO43768 121 aaKnown RBP5.74□□□□□ -1.49
CDKL5-201ENST00000379989 HERVK_113P61574 105 aa5.74□□□□□ -1.49
CDKL5-201ENST00000379989 TMEM170BQ5T4T1 132 aa5.74□□□□□ -1.49
CDKL5-201ENST00000379989 GAFA1Q96PS6 74 aa5.74□□□□□ -1.49
CDKL5-201ENST00000379989 METTL26Q96S19 204 aa5.74□□□□□ -1.49
CDKL5-201ENST00000379989 MSRB1Q9NZV6 116 aa5.74□□□□□ -1.49
CDKL5-201ENST00000379989 TRAV12-1A0A0B4J245 112 aa5.74□□□□□ -1.49
CDKL5-201ENST00000379989 H7C2G1 150 aa5.74□□□□□ -1.49
CDKL5-201ENST00000379989 C8orf49Q96NF6 230 aa5.74□□□□□ -1.49
CDKL5-201ENST00000379989 PRR25Q96S07 402 aa5.74□□□□□ -1.49
CDKL5-201ENST00000379989 PLXNB1O43157 2135 aa5.73□□□□□ -1.49
CDKL5-201ENST00000379989 TMEM178BH3BS89 294 aa5.73□□□□□ -1.49
CDKL5-201ENST00000379989 H7C423 109 aa5.73□□□□□ -1.49
CDKL5-201ENST00000379989 WNT9BO14905 357 aa5.73□□□□□ -1.49
CDKL5-201ENST00000379989 ZNF826PQ6ZT77 177 aa5.73□□□□□ -1.49
CDKL5-201ENST00000379989 TMEM75Q8N9X5 138 aa5.73□□□□□ -1.49
CDKL5-201ENST00000379989 TMEM263Q8WUH6 116 aaKnown RBP5.73□□□□□ -1.49
CDKL5-201ENST00000379989 LY6LH3BQJ8 138 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms