RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 S100A11P31949 105 aa11.87□□□□□ -0.51
PDLIM4-202ENST00000379018 SULT1A1P50225 295 aa11.87□□□□□ -0.51
PDLIM4-202ENST00000379018 ZNF345Q14585 488 aa11.87□□□□□ -0.51
PDLIM4-202ENST00000379018 VWC2Q2TAL6 325 aa11.87□□□□□ -0.51
PDLIM4-202ENST00000379018 LGALSLQ3ZCW2 172 aaPredicted RBP11.87□□□□□ -0.51
PDLIM4-202ENST00000379018 OR10J3Q5JRS4 329 aa11.87□□□□□ -0.51
PDLIM4-202ENST00000379018 FAM159AQ6UWV7 190 aa11.87□□□□□ -0.51
PDLIM4-202ENST00000379018 STX12Q86Y82 276 aa11.87□□□□□ -0.51
PDLIM4-202ENST00000379018 RASL10AQ92737 203 aa11.87□□□□□ -0.51
PDLIM4-202ENST00000379018 PHYHIPLQ96FC7 376 aa11.87□□□□□ -0.51
PDLIM4-202ENST00000379018 SPXQ9BT56 116 aa11.87□□□□□ -0.51
PDLIM4-202ENST00000379018 KRTAP29-1A8MX34 341 aaPredicted RBP11.86□□□□□ -0.51
PDLIM4-202ENST00000379018 SMLR1H3BR10 107 aa11.86□□□□□ -0.51
PDLIM4-202ENST00000379018 CSN1S1P47710 185 aa11.86□□□□□ -0.51
PDLIM4-202ENST00000379018 HBG1P69891 147 aa11.86□□□□□ -0.51
PDLIM4-202ENST00000379018 HBG2P69892 147 aa11.86□□□□□ -0.51
PDLIM4-202ENST00000379018 LINC01556Q5JQF7 62 aa11.86□□□□□ -0.51
PDLIM4-202ENST00000379018 TEX261Q6UWH6 196 aa11.86□□□□□ -0.51
PDLIM4-202ENST00000379018 THAP6Q8TBB0 222 aa11.86□□□□□ -0.51
PDLIM4-202ENST00000379018 NPCDR1Q9BY65 106 aa11.86□□□□□ -0.51
PDLIM4-202ENST00000379018 C11orf1Q9H5F2 150 aa11.86□□□□□ -0.51
PDLIM4-202ENST00000379018 BOLA1Q9Y3E2 137 aa11.86□□□□□ -0.51
PDLIM4-202ENST00000379018 TRAV8-6A0A0B4J262 113 aa11.85□□□□□ -0.51
PDLIM4-202ENST00000379018 IBA57-AS1B1ANH7 110 aa11.85□□□□□ -0.51
PDLIM4-202ENST00000379018 ZNF266Q14584 549 aa11.85□□□□□ -0.51
PDLIM4-202ENST00000379018 TMEM252Q8N6L7 170 aa11.85□□□□□ -0.51
PDLIM4-202ENST00000379018 FAM167A-AS1Q96KT0 104 aa11.85□□□□□ -0.51
PDLIM4-202ENST00000379018 PAXXQ9BUH6 204 aa11.85□□□□□ -0.51
PDLIM4-202ENST00000379018 OR51M1Q9H341 326 aa11.85□□□□□ -0.51
PDLIM4-202ENST00000379018 LYRM2Q9NU23 88 aaPredicted RBP11.85□□□□□ -0.51
PDLIM4-202ENST00000379018 DNAH8Q96JB1 4490 aa11.84□□□□□ -0.51
PDLIM4-202ENST00000379018 LECT2O14960 151 aa11.84□□□□□ -0.51
PDLIM4-202ENST00000379018 IFNA7P01567 189 aa11.84□□□□□ -0.51
PDLIM4-202ENST00000379018 CYCSP99999 105 aaKnown RBP11.84□□□□□ -0.51
PDLIM4-202ENST00000379018 WFDC2Q14508 124 aa11.84□□□□□ -0.51
PDLIM4-202ENST00000379018 DEFB104AQ8WTQ1 72 aa11.84□□□□□ -0.51
PDLIM4-202ENST00000379018 NMES1Q9C002 83 aa11.84□□□□□ -0.51
PDLIM4-202ENST00000379018 RPH3ALQ9UNE2 315 aa11.84□□□□□ -0.51
PDLIM4-202ENST00000379018 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.83□□□□□ -0.52
PDLIM4-202ENST00000379018 GNRH2O43555 120 aa11.83□□□□□ -0.52
PDLIM4-202ENST00000379018 OR7C2O60412 319 aa11.83□□□□□ -0.52
PDLIM4-202ENST00000379018 RANP62826 216 aaKnown RBP11.83□□□□□ -0.52
PDLIM4-202ENST00000379018 SH2D6Q7Z4S9 175 aa11.83□□□□□ -0.52
PDLIM4-202ENST00000379018 SYT8Q8NBV8 401 aa11.83□□□□□ -0.52
PDLIM4-202ENST00000379018 FXYD5Q96DB9 178 aa11.83□□□□□ -0.52
PDLIM4-202ENST00000379018 M0R2P5 195 aa11.82□□□□□ -0.52
PDLIM4-202ENST00000379018 RAB32Q13637 225 aa11.82□□□□□ -0.52
PDLIM4-202ENST00000379018 CLLU1Q5K131 121 aa11.82□□□□□ -0.52
PDLIM4-202ENST00000379018 Q6AWC8 147 aa11.82□□□□□ -0.52
PDLIM4-202ENST00000379018 C2orf50Q96LR7 162 aa11.82□□□□□ -0.52
PDLIM4-202ENST00000379018 IGHV3-73A0A0B4J1V6 119 aa11.81□□□□□ -0.52
PDLIM4-202ENST00000379018 A0A0D9SG52 128 aa11.81□□□□□ -0.52
PDLIM4-202ENST00000379018 TRBV7-9A0A0J9YWB2 115 aa11.81□□□□□ -0.52
PDLIM4-202ENST00000379018 LINC00862A6NCI5 91 aa11.81□□□□□ -0.52
PDLIM4-202ENST00000379018 GATA1P15976 413 aaPredicted RBP11.81□□□□□ -0.52
PDLIM4-202ENST00000379018 ATP6V1FQ16864 119 aa11.81□□□□□ -0.52
PDLIM4-202ENST00000379018 LINC01620Q4KN68 170 aa11.81□□□□□ -0.52
PDLIM4-202ENST00000379018 F6UZH7 168 aa11.8□□□□□ -0.52
PDLIM4-202ENST00000379018 TIRAPP58753 221 aa11.8□□□□□ -0.52
PDLIM4-202ENST00000379018 Q8N3U1 123 aa11.8□□□□□ -0.52
PDLIM4-202ENST00000379018 MED9Q9NWA0 146 aa11.8□□□□□ -0.52
PDLIM4-202ENST00000379018 RBAKDNA6NC62 111 aa11.79□□□□□ -0.52
PDLIM4-202ENST00000379018 FBLL1A6NHQ2 334 aaKnown RBP11.79□□□□□ -0.52
PDLIM4-202ENST00000379018 MPC2O95563 127 aa11.79□□□□□ -0.52
PDLIM4-202ENST00000379018 PFN1P07737 140 aaKnown RBP11.79□□□□□ -0.52
PDLIM4-202ENST00000379018 UBE2L3P68036 154 aaKnown RBP11.79□□□□□ -0.52
PDLIM4-202ENST00000379018 SERTAD4-AS1Q5TG53 156 aa11.79□□□□□ -0.52
PDLIM4-202ENST00000379018 TM2D2Q9BX73 214 aa11.79□□□□□ -0.52
PDLIM4-202ENST00000379018 TNFSF18Q9UNG2 199 aa11.79□□□□□ -0.52
PDLIM4-202ENST00000379018 TYMSP04818 313 aa11.78□□□□□ -0.52
PDLIM4-202ENST00000379018 NHLH2Q02577 135 aa11.78□□□□□ -0.52
PDLIM4-202ENST00000379018 IL15RAQ13261 267 aa11.78□□□□□ -0.52
PDLIM4-202ENST00000379018 SCXQ7RTU7 201 aa11.78□□□□□ -0.52
PDLIM4-202ENST00000379018 SLC51BQ86UW2 128 aa11.78□□□□□ -0.52
PDLIM4-202ENST00000379018 KCNRGQ8N5I3 272 aa11.78□□□□□ -0.52
PDLIM4-202ENST00000379018 SLC25A29Q8N8R3 303 aa11.78□□□□□ -0.52
PDLIM4-202ENST00000379018 OR5C1Q8NGR4 320 aa11.78□□□□□ -0.52
PDLIM4-202ENST00000379018 PRADC1Q9BSG0 188 aa11.78□□□□□ -0.52
PDLIM4-202ENST00000379018 DIRC3C9JPN6 131 aa11.77□□□□□ -0.53
PDLIM4-202ENST00000379018 EIF3GO75821 320 aaKnown RBP eCLIP11.77□□□□□ -0.53
PDLIM4-202ENST00000379018 PET100P0DJ07 73 aa11.77□□□□□ -0.53
PDLIM4-202ENST00000379018 LELP1Q5T871 98 aa11.77□□□□□ -0.53
PDLIM4-202ENST00000379018 Q6ZSA8 131 aa11.77□□□□□ -0.53
PDLIM4-202ENST00000379018 TMUB2Q71RG4 321 aa11.77□□□□□ -0.53
PDLIM4-202ENST00000379018 RNF222A6NCQ9 220 aa11.76□□□□□ -0.53
PDLIM4-202ENST00000379018 SLC7A5P1Q8MH63 180 aa11.76□□□□□ -0.53
PDLIM4-202ENST00000379018 PPP1R1CQ8WVI7 109 aa11.76□□□□□ -0.53
PDLIM4-202ENST00000379018 SDF2L1Q9HCN8 221 aa11.76□□□□□ -0.53
PDLIM4-202ENST00000379018 PLA2G2DQ9UNK4 145 aa11.76□□□□□ -0.53
PDLIM4-202ENST00000379018 LRP1Q07954 4544 aaKnown RBP11.75□□□□□ -0.53
PDLIM4-202ENST00000379018 TRAV21A0A0B4J279 112 aa11.75□□□□□ -0.53
PDLIM4-202ENST00000379018 ARPC5O15511 151 aa11.75□□□□□ -0.53
PDLIM4-202ENST00000379018 SIX6O95475 246 aa11.75□□□□□ -0.53
PDLIM4-202ENST00000379018 RHOHQ15669 191 aa11.75□□□□□ -0.53
PDLIM4-202ENST00000379018 TDRG1Q3Y452 100 aa11.75□□□□□ -0.53
PDLIM4-202ENST00000379018 BAALCQ8WXS3 180 aa11.75□□□□□ -0.53
PDLIM4-202ENST00000379018 ATP5SQ99766 215 aa11.75□□□□□ -0.53
PDLIM4-202ENST00000379018 LENEPQ9Y5L5 61 aa11.75□□□□□ -0.53
PDLIM4-202ENST00000379018 FXYD6-FXYD2A0A087WZ82 144 aa11.74□□□□□ -0.53
PDLIM4-202ENST00000379018 BCL2L11O43521 198 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms