RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 UBE2CO00762 179 aa11.14□□□□□ -0.63
TRIM13-202ENST00000378182 RNF183Q96D59 192 aa11.14□□□□□ -0.63
TRIM13-202ENST00000378182 H3BRN7 92 aa11.14□□□□□ -0.63
TRIM13-202ENST00000378182 IGFL3Q6UXB1 125 aa11.14□□□□□ -0.63
TRIM13-202ENST00000378182 TMEM131Q92545 1883 aa11.13□□□□□ -0.63
TRIM13-202ENST00000378182 TRAV4A0A0B4J268 109 aa11.13□□□□□ -0.63
TRIM13-202ENST00000378182 BLCAPP62952 87 aa11.13□□□□□ -0.63
TRIM13-202ENST00000378182 C14orf132Q9NPU4 83 aa11.13□□□□□ -0.63
TRIM13-202ENST00000378182 C16orf74Q96GX8 76 aa11.13□□□□□ -0.63
TRIM13-202ENST00000378182 MRPL23Q16540 153 aaKnown RBP11.13□□□□□ -0.63
TRIM13-202ENST00000378182 C1orf194Q5T5A4 169 aa11.13□□□□□ -0.63
TRIM13-202ENST00000378182 HIST3H2BBQ8N257 126 aa11.13□□□□□ -0.63
TRIM13-202ENST00000378182 Q8TCH9 128 aa11.13□□□□□ -0.63
TRIM13-202ENST00000378182 ZC2HC1AQ96GY0 325 aa11.13□□□□□ -0.63
TRIM13-202ENST00000378182 ZNF106Q9H2Y7 1883 aaKnown RBP11.13□□□□□ -0.63
TRIM13-202ENST00000378182 PLA2G2CQ5R387 149 aa11.12□□□□□ -0.63
TRIM13-202ENST00000378182 VOPP1Q96AW1 172 aa11.12□□□□□ -0.63
TRIM13-202ENST00000378182 LHFPL1Q86WI0 220 aa11.12□□□□□ -0.63
TRIM13-202ENST00000378182 PKIGQ9Y2B9 76 aa11.12□□□□□ -0.63
TRIM13-202ENST00000378182 IGHV4OR15-8A0A075B7B6 117 aa11.12□□□□□ -0.63
TRIM13-202ENST00000378182 A0A087WW49 117 aa11.12□□□□□ -0.63
TRIM13-202ENST00000378182 NCOR1O75376 2440 aa11.12□□□□□ -0.63
TRIM13-202ENST00000378182 LY6G6EA0A0G2JKS1 128 aa11.12□□□□□ -0.63
TRIM13-202ENST00000378182 SPRNQ5BIV9 151 aa11.12□□□□□ -0.63
TRIM13-202ENST00000378182 U3KQA8 63 aa11.12□□□□□ -0.63
TRIM13-202ENST00000378182 ZNF124Q15973 351 aa11.11□□□□□ -0.63
TRIM13-202ENST00000378182 CRIPAKQ8N1N5 446 aa11.11□□□□□ -0.63
TRIM13-202ENST00000378182 GFRA4Q9GZZ7 299 aa11.11□□□□□ -0.63
TRIM13-202ENST00000378182 FAM215AQ9Y5M1 114 aa11.11□□□□□ -0.63
TRIM13-202ENST00000378182 GPHB5Q86YW7 130 aa11.11□□□□□ -0.63
TRIM13-202ENST00000378182 MRPL36Q9P0J6 103 aaKnown RBP11.11□□□□□ -0.63
TRIM13-202ENST00000378182 HHLA3Q9XRX5 114 aa11.11□□□□□ -0.63
TRIM13-202ENST00000378182 ATP6V0E2Q8NHE4 81 aa11.11□□□□□ -0.63
TRIM13-202ENST00000378182 PRR25Q96S07 402 aa11.11□□□□□ -0.63
TRIM13-202ENST00000378182 COX7B2Q8TF08 81 aa11.11□□□□□ -0.63
TRIM13-202ENST00000378182 SMAD5-AS1Q9Y6J3 95 aa11.11□□□□□ -0.63
TRIM13-202ENST00000378182 FAM104BQ5XKR9 115 aa11.11□□□□□ -0.63
TRIM13-202ENST00000378182 TRBV6-6A0A0A6YYG2 114 aa11.11□□□□□ -0.63
TRIM13-202ENST00000378182 MPZP25189 248 aa11.11□□□□□ -0.63
TRIM13-202ENST00000378182 K7EQD1 137 aa11.1□□□□□ -0.63
TRIM13-202ENST00000378182 TANC1Q9C0D5 1861 aa11.1□□□□□ -0.63
TRIM13-202ENST00000378182 COX7A2LO14548 114 aa11.1□□□□□ -0.63
TRIM13-202ENST00000378182 WIPF2Q8TF74 440 aaPredicted RBP11.1□□□□□ -0.63
TRIM13-202ENST00000378182 CYTL1Q9NRR1 136 aa11.1□□□□□ -0.63
TRIM13-202ENST00000378182 DYNAPQ8N1N2 210 aa11.1□□□□□ -0.63
TRIM13-202ENST00000378182 Q9H8V8 135 aa11.1□□□□□ -0.63
TRIM13-202ENST00000378182 ATP5G1P05496 136 aa11.1□□□□□ -0.63
TRIM13-202ENST00000378182 IGKV2-24A0A0C4DH68 120 aa11.09□□□□□ -0.63
TRIM13-202ENST00000378182 HIST2H2BCQ6DN03 193 aa11.09□□□□□ -0.63
TRIM13-202ENST00000378182 C8orf31Q8N9H6 132 aa11.09□□□□□ -0.63
TRIM13-202ENST00000378182 SIGLEC8Q9NYZ4 499 aa11.09□□□□□ -0.63
TRIM13-202ENST00000378182 ROS1P08922 2347 aa11.09□□□□□ -0.63
TRIM13-202ENST00000378182 IGKV1-6A0A0C4DH72 117 aa11.08□□□□□ -0.64
TRIM13-202ENST00000378182 CARD19Q96LW7 228 aa11.08□□□□□ -0.64
TRIM13-202ENST00000378182 CENPVL3A0A0U1RRI6 287 aa11.08□□□□□ -0.64
TRIM13-202ENST00000378182 K7ERJ3 54 aa11.08□□□□□ -0.64
TRIM13-202ENST00000378182 SPATA25Q9BR10 227 aa11.08□□□□□ -0.64
TRIM13-202ENST00000378182 WT1P19544 449 aaPredicted RBP11.08□□□□□ -0.64
TRIM13-202ENST00000378182 WT1-ASQ06250 92 aa11.08□□□□□ -0.64
TRIM13-202ENST00000378182 NUP210Q8TEM1 1887 aaPredicted RBP11.08□□□□□ -0.64
TRIM13-202ENST00000378182 FNDC10F2Z333 226 aa11.08□□□□□ -0.64
TRIM13-202ENST00000378182 H0Y9J4 135 aa11.08□□□□□ -0.64
TRIM13-202ENST00000378182 QRFPP83859 136 aa11.07□□□□□ -0.64
TRIM13-202ENST00000378182 RITA1Q96K30 269 aa11.07□□□□□ -0.64
TRIM13-202ENST00000378182 PROK2Q9HC23 129 aa11.07□□□□□ -0.64
TRIM13-202ENST00000378182 WFDC9Q8NEX5 89 aa11.07□□□□□ -0.64
TRIM13-202ENST00000378182 ORMDL1Q9P0S3 153 aa11.07□□□□□ -0.64
TRIM13-202ENST00000378182 PYGO2Q9BRQ0 406 aa11.07□□□□□ -0.64
TRIM13-202ENST00000378182 SLC25A29Q8N8R3 303 aa11.07□□□□□ -0.64
TRIM13-202ENST00000378182 HIST2H2BDQ6DRA6 164 aa11.07□□□□□ -0.64
TRIM13-202ENST00000378182 NOTCH3Q9UM47 2321 aa11.07□□□□□ -0.64
TRIM13-202ENST00000378182 AJUBAQ96IF1 538 aa11.06□□□□□ -0.64
TRIM13-202ENST00000378182 IGHV2-70P01814 119 aa11.06□□□□□ -0.64
TRIM13-202ENST00000378182 MRPL35Q9NZE8 188 aaKnown RBP11.06□□□□□ -0.64
TRIM13-202ENST00000378182 NDUFB1O75438 58 aa11.06□□□□□ -0.64
TRIM13-202ENST00000378182 PIP4P1Q86T03 277 aa11.06□□□□□ -0.64
TRIM13-202ENST00000378182 TMEM190Q8WZ59 177 aa11.06□□□□□ -0.64
TRIM13-202ENST00000378182 FUSP35637 526 aaKnown RBP eCLIP11.06□□□□□ -0.64
TRIM13-202ENST00000378182 RPL39LQ96EH5 51 aaKnown RBP11.06□□□□□ -0.64
TRIM13-202ENST00000378182 KLK12Q9UKR0 248 aa11.06□□□□□ -0.64
TRIM13-202ENST00000378182 PLXNA2O75051 1894 aa11.06□□□□□ -0.64
TRIM13-202ENST00000378182 Q8NFD4 153 aa11.05□□□□□ -0.64
TRIM13-202ENST00000378182 FAM110AQ9BQ89 295 aa11.05□□□□□ -0.64
TRIM13-202ENST00000378182 INAFM1C9JVW0 142 aa11.05□□□□□ -0.64
TRIM13-202ENST00000378182 M0R2N4 97 aa11.05□□□□□ -0.64
TRIM13-202ENST00000378182 NPYP01303 97 aa11.05□□□□□ -0.64
TRIM13-202ENST00000378182 SRSF2Q01130 221 aaKnown RBP11.05□□□□□ -0.64
TRIM13-202ENST00000378182 DENND4CQ5VZ89 1909 aa11.05□□□□□ -0.64
TRIM13-202ENST00000378182 FAM231BA6NCW3 169 aa11.04□□□□□ -0.64
TRIM13-202ENST00000378182 CEND1Q8N111 149 aa11.04□□□□□ -0.64
TRIM13-202ENST00000378182 DEFB125Q8N687 156 aa11.04□□□□□ -0.64
TRIM13-202ENST00000378182 TNCP24821 2201 aa11.04□□□□□ -0.64
TRIM13-202ENST00000378182 PLXNB3Q9ULL4 1909 aa11.04□□□□□ -0.64
TRIM13-202ENST00000378182 NOTCH4Q99466 2003 aa11.04□□□□□ -0.64
TRIM13-202ENST00000378182 TRAV1-1A0A0B4J248 108 aa11.04□□□□□ -0.64
TRIM13-202ENST00000378182 J3QQQ9 107 aa11.04□□□□□ -0.64
TRIM13-202ENST00000378182 K7EMI3 77 aa11.04□□□□□ -0.64
TRIM13-202ENST00000378182 CTSZQ9UBR2 303 aa11.04□□□□□ -0.64
TRIM13-202ENST00000378182 OBSL1O75147 1896 aa11.04□□□□□ -0.64
TRIM13-202ENST00000378182 NCOA6Q14686 2063 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms