RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 TRPT1Q86TN4 253 aaKnown RBP11.87□□□□□ -0.51
NPHP4-201ENST00000378156 MED12LQ86YW9 2145 aa11.87□□□□□ -0.51
NPHP4-201ENST00000378156 H3BRN7 92 aa11.87□□□□□ -0.51
NPHP4-201ENST00000378156 IGHV3-53P01767 116 aa11.87□□□□□ -0.51
NPHP4-201ENST00000378156 C8orf86Q6ZUL3 223 aa11.87□□□□□ -0.51
NPHP4-201ENST00000378156 SOCS3O14543 225 aa11.86□□□□□ -0.51
NPHP4-201ENST00000378156 IFITM1P13164 125 aa11.86□□□□□ -0.51
NPHP4-201ENST00000378156 ADORA2A-AS1P86434 159 aa11.86□□□□□ -0.51
NPHP4-201ENST00000378156 MSMPQ1L6U9 139 aa11.86□□□□□ -0.51
NPHP4-201ENST00000378156 COA6Q5JTJ3 125 aaKnown RBP11.86□□□□□ -0.51
NPHP4-201ENST00000378156 HIVEP2P31629 2446 aa11.86□□□□□ -0.51
NPHP4-201ENST00000378156 PIEZO2Q9H5I5 2752 aa11.86□□□□□ -0.51
NPHP4-201ENST00000378156 A0A087WWL8 130 aa11.86□□□□□ -0.51
NPHP4-201ENST00000378156 PMVKQ15126 192 aa11.86□□□□□ -0.51
NPHP4-201ENST00000378156 ODF3L1Q8IXM7 274 aa11.86□□□□□ -0.51
NPHP4-201ENST00000378156 C1orf159Q96HA4 380 aa11.86□□□□□ -0.51
NPHP4-201ENST00000378156 CDKN1BP46527 198 aa11.85□□□□□ -0.51
NPHP4-201ENST00000378156 TCTEX1D4Q5JR98 221 aa11.85□□□□□ -0.51
NPHP4-201ENST00000378156 MORN5Q5VZ52 161 aa11.85□□□□□ -0.51
NPHP4-201ENST00000378156 BOD1L2Q8IYS8 172 aa11.85□□□□□ -0.51
NPHP4-201ENST00000378156 HOXB4P17483 251 aaPredicted RBP11.85□□□□□ -0.51
NPHP4-201ENST00000378156 PRR25Q96S07 402 aa11.85□□□□□ -0.51
NPHP4-201ENST00000378156 IGHV4-61A0A0C4DH41 118 aa11.85□□□□□ -0.51
NPHP4-201ENST00000378156 ZNF491Q8N8L2 437 aa11.85□□□□□ -0.51
NPHP4-201ENST00000378156 IGFBPL1Q8WX77 278 aa11.85□□□□□ -0.51
NPHP4-201ENST00000378156 NUPR1O60356 82 aa11.85□□□□□ -0.51
NPHP4-201ENST00000378156 SPINK13Q1W4C9 94 aa11.85□□□□□ -0.51
NPHP4-201ENST00000378156 C3orf56Q8N813 242 aa11.84□□□□□ -0.51
NPHP4-201ENST00000378156 C17orf77Q96MU5 243 aa11.84□□□□□ -0.51
NPHP4-201ENST00000378156 KIR2DL5BA0A0G2JN68 375 aa11.84□□□□□ -0.51
NPHP4-201ENST00000378156 KIR2DL5BA0A0G2JPC4 375 aa11.84□□□□□ -0.51
NPHP4-201ENST00000378156 ELANEP08246 267 aa11.84□□□□□ -0.51
NPHP4-201ENST00000378156 KIR2DL5AQ8N109 375 aa11.84□□□□□ -0.51
NPHP4-201ENST00000378156 ZC2HC1AQ96GY0 325 aa11.84□□□□□ -0.51
NPHP4-201ENST00000378156 PRO1854Q9UHT4 67 aa11.84□□□□□ -0.51
NPHP4-201ENST00000378156 TP53TG1Q9Y2A0 90 aa11.84□□□□□ -0.51
NPHP4-201ENST00000378156 WNK1Q9H4A3 2382 aa11.84□□□□□ -0.51
NPHP4-201ENST00000378156 CITED1Q99966 193 aa11.84□□□□□ -0.51
NPHP4-201ENST00000378156 XCL2Q9UBD3 114 aa11.84□□□□□ -0.51
NPHP4-201ENST00000378156 TNCP24821 2201 aa11.83□□□□□ -0.52
NPHP4-201ENST00000378156 EML6Q6ZMW3 1958 aa11.83□□□□□ -0.52
NPHP4-201ENST00000378156 NAV2Q8IVL1 2488 aa11.83□□□□□ -0.52
NPHP4-201ENST00000378156 MRPL51Q4U2R6 128 aaKnown RBP11.83□□□□□ -0.52
NPHP4-201ENST00000378156 CEND1Q8N111 149 aa11.83□□□□□ -0.52
NPHP4-201ENST00000378156 TLN1Q9Y490 2541 aaKnown RBP11.83□□□□□ -0.52
NPHP4-201ENST00000378156 CENPVL3A0A0U1RRI6 287 aa11.82□□□□□ -0.52
NPHP4-201ENST00000378156 RHODO00212 210 aa11.82□□□□□ -0.52
NPHP4-201ENST00000378156 PRB1P04280 392 aa11.82□□□□□ -0.52
NPHP4-201ENST00000378156 DEFB112Q30KQ8 113 aa11.82□□□□□ -0.52
NPHP4-201ENST00000378156 Q8NA96 180 aa11.82□□□□□ -0.52
NPHP4-201ENST00000378156 VGLL1Q99990 258 aa11.82□□□□□ -0.52
NPHP4-201ENST00000378156 RITA1Q96K30 269 aa11.82□□□□□ -0.52
NPHP4-201ENST00000378156 AZU1P20160 251 aa11.82□□□□□ -0.52
NPHP4-201ENST00000378156 ZNF295-AS1Q8N0V1 137 aa11.82□□□□□ -0.52
NPHP4-201ENST00000378156 ZNF625Q96I27 306 aaPredicted RBP11.82□□□□□ -0.52
NPHP4-201ENST00000378156 C10orf142B7Z368 130 aa11.82□□□□□ -0.52
NPHP4-201ENST00000378156 F8VRH5 84 aa11.82□□□□□ -0.52
NPHP4-201ENST00000378156 TRAV13-1A0A0B4J241 112 aa11.81□□□□□ -0.52
NPHP4-201ENST00000378156 HLA-DRB4P13762 266 aa11.81□□□□□ -0.52
NPHP4-201ENST00000378156 HLA-DRB4X5D2U9 266 aa11.81□□□□□ -0.52
NPHP4-201ENST00000378156 IGHV4-59P01825 116 aa11.81□□□□□ -0.52
NPHP4-201ENST00000378156 FGF6P10767 208 aa11.81□□□□□ -0.52
NPHP4-201ENST00000378156 IGKV1OR2-108A0A075B7D4 117 aa11.81□□□□□ -0.52
NPHP4-201ENST00000378156 GAGE12JA6NER3 117 aa11.81□□□□□ -0.52
NPHP4-201ENST00000378156 GAGE7O76087 117 aa11.81□□□□□ -0.52
NPHP4-201ENST00000378156 GAGE12FP0CL80 117 aa11.81□□□□□ -0.52
NPHP4-201ENST00000378156 GAGE12GP0CL81 117 aa11.81□□□□□ -0.52
NPHP4-201ENST00000378156 GAGE12IP0CL82 117 aa11.81□□□□□ -0.52
NPHP4-201ENST00000378156 GAGE4Q13068 117 aa11.81□□□□□ -0.52
NPHP4-201ENST00000378156 SIGLEC8Q9NYZ4 499 aa11.81□□□□□ -0.52
NPHP4-201ENST00000378156 DYSFO75923 2080 aa11.81□□□□□ -0.52
NPHP4-201ENST00000378156 IGHV4-30-2A0A087WSY4 118 aa11.81□□□□□ -0.52
NPHP4-201ENST00000378156 PATE2Q6UY27 113 aa11.81□□□□□ -0.52
NPHP4-201ENST00000378156 PROP1O75360 226 aa11.8□□□□□ -0.52
NPHP4-201ENST00000378156 DEFB130BP0DP73 79 aa11.8□□□□□ -0.52
NPHP4-201ENST00000378156 DEFB130AP0DP74 79 aa11.8□□□□□ -0.52
NPHP4-201ENST00000378156 H3BUA1 57 aa11.8□□□□□ -0.52
NPHP4-201ENST00000378156 HLA-DMBP28068 263 aa11.8□□□□□ -0.52
NPHP4-201ENST00000378156 BRWD1-AS2P59051 145 aa11.8□□□□□ -0.52
NPHP4-201ENST00000378156 DEFB121Q5J5C9 76 aa11.8□□□□□ -0.52
NPHP4-201ENST00000378156 UBL5Q9BZL1 73 aa11.8□□□□□ -0.52
NPHP4-201ENST00000378156 FBXL19-AS1Q494R0 122 aa11.8□□□□□ -0.52
NPHP4-201ENST00000378156 DEFB125Q8N687 156 aa11.8□□□□□ -0.52
NPHP4-201ENST00000378156 WIPF2Q8TF74 440 aaPredicted RBP11.8□□□□□ -0.52
NPHP4-201ENST00000378156 VPREB3Q9UKI3 123 aa11.8□□□□□ -0.52
NPHP4-201ENST00000378156 IGHV7-4-1A0A0J9YVY3 117 aa11.79□□□□□ -0.52
NPHP4-201ENST00000378156 Q71RC1 249 aaPredicted RBP11.79□□□□□ -0.52
NPHP4-201ENST00000378156 MRPL35Q9NZE8 188 aaKnown RBP11.79□□□□□ -0.52
NPHP4-201ENST00000378156 KNCNA6PVL3 124 aa11.79□□□□□ -0.52
NPHP4-201ENST00000378156 F8WEM9 126 aa11.79□□□□□ -0.52
NPHP4-201ENST00000378156 LTAP01374 205 aa11.79□□□□□ -0.52
NPHP4-201ENST00000378156 PRSS57Q6UWY2 283 aa11.79□□□□□ -0.52
NPHP4-201ENST00000378156 H3BMG7 143 aa11.79□□□□□ -0.52
NPHP4-201ENST00000378156 P0C879 139 aa11.79□□□□□ -0.52
NPHP4-201ENST00000378156 KLF5Q13887 457 aaPredicted RBP11.79□□□□□ -0.52
NPHP4-201ENST00000378156 SS18Q15532 418 aa11.79□□□□□ -0.52
NPHP4-201ENST00000378156 E7EUB6 86 aa11.78□□□□□ -0.52
NPHP4-201ENST00000378156 TRACP01848 142 aa11.78□□□□□ -0.52
NPHP4-201ENST00000378156 DAZAP2Q15038 168 aaPredicted RBP11.78□□□□□ -0.52
NPHP4-201ENST00000378156 DEFB113Q30KQ7 82 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms