RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 C9orf66Q5T8R8 295 aa9.51□□□□□ -0.89
PCDHA9-201ENST00000378122 AMTNQ6UX39 209 aa9.51□□□□□ -0.89
PCDHA9-201ENST00000378122 NCOR1P1Q9H4R4 102 aa9.51□□□□□ -0.89
PCDHA9-201ENST00000378122 IGHV3-30P01768 117 aa9.5□□□□□ -0.89
PCDHA9-201ENST00000378122 IGHV3-33P01772 117 aa9.5□□□□□ -0.89
PCDHA9-201ENST00000378122 IGHV3-30-3P0DP02 117 aa9.5□□□□□ -0.89
PCDHA9-201ENST00000378122 IGHV3-30-5P0DP03 117 aa9.5□□□□□ -0.89
PCDHA9-201ENST00000378122 RNF183Q96D59 192 aa9.5□□□□□ -0.89
PCDHA9-201ENST00000378122 C17orf77Q96MU5 243 aa9.5□□□□□ -0.89
PCDHA9-201ENST00000378122 SS18L2Q9UHA2 77 aa9.5□□□□□ -0.89
PCDHA9-201ENST00000378122 DENND4AQ7Z401 1863 aa9.5□□□□□ -0.89
PCDHA9-201ENST00000378122 RIF1Q5UIP0 2472 aaKnown RBP9.5□□□□□ -0.89
PCDHA9-201ENST00000378122 J3QLI3 93 aa9.5□□□□□ -0.89
PCDHA9-201ENST00000378122 LTAP01374 205 aa9.5□□□□□ -0.89
PCDHA9-201ENST00000378122 ADAMTS9Q9P2N4 1935 aa9.5□□□□□ -0.89
PCDHA9-201ENST00000378122 KIR2DL5BA0A0G2JN68 375 aa9.5□□□□□ -0.89
PCDHA9-201ENST00000378122 KIR2DL5BA0A0G2JPC4 375 aa9.5□□□□□ -0.89
PCDHA9-201ENST00000378122 ETV2O00321 342 aaPredicted RBP9.5□□□□□ -0.89
PCDHA9-201ENST00000378122 KIR2DL5AQ8N109 375 aa9.5□□□□□ -0.89
PCDHA9-201ENST00000378122 CARD19Q96LW7 228 aa9.5□□□□□ -0.89
PCDHA9-201ENST00000378122 PRO1854Q9UHT4 67 aa9.5□□□□□ -0.89
PCDHA9-201ENST00000378122 TAL2Q16559 108 aa9.5□□□□□ -0.89
PCDHA9-201ENST00000378122 TCTEX1D4Q5JR98 221 aa9.5□□□□□ -0.89
PCDHA9-201ENST00000378122 TRAV12-1A0A0B4J245 112 aa9.49□□□□□ -0.89
PCDHA9-201ENST00000378122 SPANXA1Q9NS26 97 aa9.49□□□□□ -0.89
PCDHA9-201ENST00000378122 IGHV4-28A0A0C4DH34 117 aa9.49□□□□□ -0.89
PCDHA9-201ENST00000378122 ROS1P08922 2347 aa9.49□□□□□ -0.89
PCDHA9-201ENST00000378122 FRMPD3Q5JV73 1810 aa9.49□□□□□ -0.89
PCDHA9-201ENST00000378122 IGHV2-70DA0A0C4DH43 119 aa9.49□□□□□ -0.89
PCDHA9-201ENST00000378122 PIFOQ8TCI5 191 aa9.49□□□□□ -0.89
PCDHA9-201ENST00000378122 KLF2Q9Y5W3 355 aaPredicted RBP9.49□□□□□ -0.89
PCDHA9-201ENST00000378122 TNCP24821 2201 aa9.49□□□□□ -0.89
PCDHA9-201ENST00000378122 C11orf52Q96A22 123 aa9.49□□□□□ -0.89
PCDHA9-201ENST00000378122 VOPP1Q96AW1 172 aa9.49□□□□□ -0.89
PCDHA9-201ENST00000378122 hADV29S1A0JD25 119 aa9.48□□□□□ -0.89
PCDHA9-201ENST00000378122 SDHAF1A6NFY7 115 aa9.48□□□□□ -0.89
PCDHA9-201ENST00000378122 NUPR1O60356 82 aa9.48□□□□□ -0.89
PCDHA9-201ENST00000378122 INAFM2P0DMQ5 153 aa9.48□□□□□ -0.89
PCDHA9-201ENST00000378122 UTF1Q5T230 341 aa9.48□□□□□ -0.89
PCDHA9-201ENST00000378122 SRCAPQ6ZRS2 3230 aa9.48□□□□□ -0.89
PCDHA9-201ENST00000378122 LY6G6EA0A0G2JKS1 128 aa9.48□□□□□ -0.89
PCDHA9-201ENST00000378122 IL15RAQ13261 267 aa9.48□□□□□ -0.89
PCDHA9-201ENST00000378122 APRG1Q8IVJ8 170 aa9.48□□□□□ -0.89
PCDHA9-201ENST00000378122 U3KQA8 63 aa9.48□□□□□ -0.89
PCDHA9-201ENST00000378122 IGLV10-54A0A075B6I4 117 aa9.48□□□□□ -0.89
PCDHA9-201ENST00000378122 IGLV3-1P01715 115 aa9.48□□□□□ -0.89
PCDHA9-201ENST00000378122 GP9P14770 177 aa9.48□□□□□ -0.89
PCDHA9-201ENST00000378122 RMI2Q96E14 147 aa9.48□□□□□ -0.89
PCDHA9-201ENST00000378122 IGHV1OR15-1A0A075B7D0 117 aa9.48□□□□□ -0.89
PCDHA9-201ENST00000378122 HLA-DMBP28068 263 aa9.48□□□□□ -0.89
PCDHA9-201ENST00000378122 LOXP28300 417 aaPredicted RBP9.48□□□□□ -0.89
PCDHA9-201ENST00000378122 PIP4P1Q86T03 277 aa9.47□□□□□ -0.89
PCDHA9-201ENST00000378122 PKDREJQ9NTG1 2253 aa9.47□□□□□ -0.89
PCDHA9-201ENST00000378122 PCP2Q8IVA1 136 aa9.47□□□□□ -0.89
PCDHA9-201ENST00000378122 ZNF843Q8N446 348 aa9.47□□□□□ -0.89
PCDHA9-201ENST00000378122 PLA2G2EQ9NZK7 142 aa9.47□□□□□ -0.89
PCDHA9-201ENST00000378122 WIPF2Q8TF74 440 aaPredicted RBP9.47□□□□□ -0.89
PCDHA9-201ENST00000378122 TRBV25-1A0A075B6N4 114 aa9.46□□□□□ -0.89
PCDHA9-201ENST00000378122 F8VRH5 84 aa9.46□□□□□ -0.89
PCDHA9-201ENST00000378122 CFHR4Q92496 578 aa9.46□□□□□ -0.89
PCDHA9-201ENST00000378122 NDUFA12Q9UI09 145 aa9.46□□□□□ -0.89
PCDHA9-201ENST00000378122 SPRY2O43597 315 aa9.46□□□□□ -0.9
PCDHA9-201ENST00000378122 TDRG1Q3Y452 100 aa9.46□□□□□ -0.9
PCDHA9-201ENST00000378122 ZNRF2Q8NHG8 242 aa9.46□□□□□ -0.9
PCDHA9-201ENST00000378122 NOP10Q9NPE3 64 aaKnown RBP9.46□□□□□ -0.9
PCDHA9-201ENST00000378122 SCRT2Q9NQ03 307 aa9.46□□□□□ -0.9
PCDHA9-201ENST00000378122 NBASA2RRP1 2371 aa9.46□□□□□ -0.9
PCDHA9-201ENST00000378122 CCL18P55774 89 aa9.46□□□□□ -0.9
PCDHA9-201ENST00000378122 ANAPC1Q9H1A4 1944 aa9.46□□□□□ -0.9
PCDHA9-201ENST00000378122 ZNF747Q9BV97 191 aa9.45□□□□□ -0.9
PCDHA9-201ENST00000378122 SMIM2Q9BVW6 85 aa9.45□□□□□ -0.9
PCDHA9-201ENST00000378122 KIAA1671Q9BY89 1806 aa9.45□□□□□ -0.9
PCDHA9-201ENST00000378122 CREBBPQ92793 2442 aa9.45□□□□□ -0.9
PCDHA9-201ENST00000378122 PRSS29PA6NIE9 313 aa9.45□□□□□ -0.9
PCDHA9-201ENST00000378122 J3QQQ9 107 aa9.45□□□□□ -0.9
PCDHA9-201ENST00000378122 WT1P19544 449 aaPredicted RBP9.45□□□□□ -0.9
PCDHA9-201ENST00000378122 RBMY1FQ15415 496 aaKnown RBP9.45□□□□□ -0.9
PCDHA9-201ENST00000378122 ANKRD29Q8N6D5 301 aa9.45□□□□□ -0.9
PCDHA9-201ENST00000378122 M0R2N4 97 aa9.45□□□□□ -0.9
PCDHA9-201ENST00000378122 IGLC1P0CG04 106 aa9.45□□□□□ -0.9
PCDHA9-201ENST00000378122 XCL1P47992 114 aa9.45□□□□□ -0.9
PCDHA9-201ENST00000378122 PRR20EP86478 221 aa9.45□□□□□ -0.9
PCDHA9-201ENST00000378122 PRR20CP86479 221 aa9.45□□□□□ -0.9
PCDHA9-201ENST00000378122 PRR20DP86480 221 aa9.45□□□□□ -0.9
PCDHA9-201ENST00000378122 PRR20BP86481 221 aa9.45□□□□□ -0.9
PCDHA9-201ENST00000378122 PRR20AP86496 221 aa9.45□□□□□ -0.9
PCDHA9-201ENST00000378122 DEFB125Q8N687 156 aa9.45□□□□□ -0.9
PCDHA9-201ENST00000378122 NTN5Q8WTR8 489 aaPredicted RBP9.44□□□□□ -0.9
PCDHA9-201ENST00000378122 PLXNB3Q9ULL4 1909 aa9.44□□□□□ -0.9
PCDHA9-201ENST00000378122 RS1O15537 224 aa9.44□□□□□ -0.9
PCDHA9-201ENST00000378122 LINC00311Q8N616 119 aa9.44□□□□□ -0.9
PCDHA9-201ENST00000378122 NDUFA4O00483 81 aa9.44□□□□□ -0.9
PCDHA9-201ENST00000378122 LINC00173Q6ZV60 143 aa9.44□□□□□ -0.9
PCDHA9-201ENST00000378122 TANC2Q9HCD6 1990 aa9.44□□□□□ -0.9
PCDHA9-201ENST00000378122 LY6G6CO95867 125 aa9.44□□□□□ -0.9
PCDHA9-201ENST00000378122 K7EMI3 77 aa9.44□□□□□ -0.9
PCDHA9-201ENST00000378122 DYNAPQ8N1N2 210 aa9.44□□□□□ -0.9
PCDHA9-201ENST00000378122 TINCRA0A1B0GVN0 87 aa9.43□□□□□ -0.9
PCDHA9-201ENST00000378122 GNRH2O43555 120 aa9.43□□□□□ -0.9
PCDHA9-201ENST00000378122 SPRNQ5BIV9 151 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms