RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 Q6ZS46 218 aa8.3□□□□□ -1.08
BEST1-201ENST00000378043 CSPG4Q6UVK1 2322 aa8.3□□□□□ -1.08
BEST1-201ENST00000378043 LY6EQ16553 131 aa8.29□□□□□ -1.08
BEST1-201ENST00000378043 FOXC2Q99958 501 aa8.29□□□□□ -1.08
BEST1-201ENST00000378043 LENEPQ9Y5L5 61 aa8.29□□□□□ -1.08
BEST1-201ENST00000378043 NDUFA4O00483 81 aa8.29□□□□□ -1.08
BEST1-201ENST00000378043 IGHV3-11P01762 117 aa8.29□□□□□ -1.08
BEST1-201ENST00000378043 OR4X2Q8NGF9 303 aa8.29□□□□□ -1.08
BEST1-201ENST00000378043 JMJD8Q96S16 334 aa8.29□□□□□ -1.08
BEST1-201ENST00000378043 H3BRM9 83 aa8.28□□□□□ -1.08
BEST1-201ENST00000378043 IGKCP01834 107 aa8.28□□□□□ -1.08
BEST1-201ENST00000378043 IGHG2P01859 326 aa8.28□□□□□ -1.08
BEST1-201ENST00000378043 KIR3DS1Q14943 382 aa8.28□□□□□ -1.08
BEST1-201ENST00000378043 SMIM15Q7Z3B0 74 aa8.28□□□□□ -1.08
BEST1-201ENST00000378043 MUC4Q99102 2169 aa8.28□□□□□ -1.08
BEST1-201ENST00000378043 BLCAPP62952 87 aa8.28□□□□□ -1.08
BEST1-201ENST00000378043 LAGE3Q14657 143 aa8.28□□□□□ -1.08
BEST1-201ENST00000378043 LCNL1Q6ZST4 164 aa8.28□□□□□ -1.08
BEST1-201ENST00000378043 LINC00477Q96M19 166 aa8.28□□□□□ -1.08
BEST1-201ENST00000378043 CST9LQ9H4G1 147 aa8.28□□□□□ -1.08
BEST1-201ENST00000378043 A6NDN8 102 aa8.27□□□□□ -1.09
BEST1-201ENST00000378043 TMEM8BA6NDV4 472 aa8.27□□□□□ -1.09
BEST1-201ENST00000378043 C9orf118A6NHY6 69 aa8.27□□□□□ -1.09
BEST1-201ENST00000378043 F6UB75 175 aa8.27□□□□□ -1.09
BEST1-201ENST00000378043 H3BUX3 64 aa8.27□□□□□ -1.09
BEST1-201ENST00000378043 NAA38Q9BRA0 125 aaKnown RBP8.27□□□□□ -1.09
BEST1-201ENST00000378043 BRI3O95415 125 aa8.27□□□□□ -1.09
BEST1-201ENST00000378043 ZC2HC1BQ5TFG8 222 aa8.27□□□□□ -1.09
BEST1-201ENST00000378043 UFSP1Q6NVU6 142 aa8.27□□□□□ -1.09
BEST1-201ENST00000378043 GTSCR1Q86UQ5 136 aa8.27□□□□□ -1.09
BEST1-201ENST00000378043 C10orf105Q8TEF2 133 aa8.27□□□□□ -1.09
BEST1-201ENST00000378043 FAM19A4Q96LR4 140 aa8.27□□□□□ -1.09
BEST1-201ENST00000378043 MRPL35Q9NZE8 188 aaKnown RBP8.27□□□□□ -1.09
BEST1-201ENST00000378043 SELENOKQ9Y6D0 94 aa8.27□□□□□ -1.09
BEST1-201ENST00000378043 USP9XQ93008 2570 aaPredicted RBP8.27□□□□□ -1.09
BEST1-201ENST00000378043 GAGE12BA1L429 117 aa8.26□□□□□ -1.09
BEST1-201ENST00000378043 A6NDX4 124 aa8.26□□□□□ -1.09
BEST1-201ENST00000378043 ATP5LO75964 103 aa8.26□□□□□ -1.09
BEST1-201ENST00000378043 DPM2O94777 84 aa8.26□□□□□ -1.09
BEST1-201ENST00000378043 TM4SF20Q53R12 229 aa8.26□□□□□ -1.09
BEST1-201ENST00000378043 AGRNO00468 2067 aa8.26□□□□□ -1.09
BEST1-201ENST00000378043 H3BUT2 72 aa8.26□□□□□ -1.09
BEST1-201ENST00000378043 M0R381 172 aa8.26□□□□□ -1.09
BEST1-201ENST00000378043 CDKN1BP46527 198 aa8.26□□□□□ -1.09
BEST1-201ENST00000378043 OR10J6PQ8NGY7 276 aa8.26□□□□□ -1.09
BEST1-201ENST00000378043 MRAP2Q96G30 205 aa8.26□□□□□ -1.09
BEST1-201ENST00000378043 USMG5Q96IX5 58 aa8.26□□□□□ -1.09
BEST1-201ENST00000378043 SPOCK3Q9BQ16 436 aa8.26□□□□□ -1.09
BEST1-201ENST00000378043 PIMREGQ9BSJ6 248 aa8.26□□□□□ -1.09
BEST1-201ENST00000378043 SMPXQ9UHP9 88 aa8.26□□□□□ -1.09
BEST1-201ENST00000378043 TRAV21A0A0B4J279 112 aa8.25□□□□□ -1.09
BEST1-201ENST00000378043 OVOL1O14753 267 aa8.25□□□□□ -1.09
BEST1-201ENST00000378043 ANXA2RQ3ZCQ2 193 aa8.25□□□□□ -1.09
BEST1-201ENST00000378043 RASL10AQ92737 203 aa8.25□□□□□ -1.09
BEST1-201ENST00000378043 SMIM2Q9BVW6 85 aa8.25□□□□□ -1.09
BEST1-201ENST00000378043 TMEM160Q9NX00 188 aa8.25□□□□□ -1.09
BEST1-201ENST00000378043 IGKV3-7A0A075B6H7 116 aa8.25□□□□□ -1.09
BEST1-201ENST00000378043 TRBV25-1A0A075B6N4 114 aa8.25□□□□□ -1.09
BEST1-201ENST00000378043 IGHV4-30-2A0A087WSY4 118 aa8.25□□□□□ -1.09
BEST1-201ENST00000378043 PF4V1P10720 104 aa8.25□□□□□ -1.09
BEST1-201ENST00000378043 EDN2P20800 178 aa8.25□□□□□ -1.09
BEST1-201ENST00000378043 SRSF1Q07955 248 aaKnown RBP eCLIP8.25□□□□□ -1.09
BEST1-201ENST00000378043 PSMG4Q5JS54 123 aa8.25□□□□□ -1.09
BEST1-201ENST00000378043 MYOZ3Q8TDC0 251 aa8.25□□□□□ -1.09
BEST1-201ENST00000378043 RAB37Q96AX2 223 aa8.25□□□□□ -1.09
BEST1-201ENST00000378043 HIGD1BQ9P298 99 aa8.25□□□□□ -1.09
BEST1-201ENST00000378043 POLQO75417 2590 aa8.25□□□□□ -1.09
BEST1-201ENST00000378043 A0A0G2JLM5 398 aa8.24□□□□□ -1.09
BEST1-201ENST00000378043 GAGE10A6NGK3 116 aa8.24□□□□□ -1.09
BEST1-201ENST00000378043 RNF223E7ERA6 249 aa8.24□□□□□ -1.09
BEST1-201ENST00000378043 H3BUA1 57 aa8.24□□□□□ -1.09
BEST1-201ENST00000378043 IGLV1-40P01703 118 aa8.24□□□□□ -1.09
BEST1-201ENST00000378043 FXYD2P54710 66 aa8.24□□□□□ -1.09
BEST1-201ENST00000378043 RPL11P62913 178 aaKnown RBP8.24□□□□□ -1.09
BEST1-201ENST00000378043 OCIAD2Q56VL3 154 aa8.24□□□□□ -1.09
BEST1-201ENST00000378043 APRG1Q8IVJ8 170 aa8.24□□□□□ -1.09
BEST1-201ENST00000378043 DOPEY1Q5JWR5 2465 aa8.24□□□□□ -1.09
BEST1-201ENST00000378043 ZANQ9Y493 2812 aa8.24□□□□□ -1.09
BEST1-201ENST00000378043 CACNA1AO00555 2505 aa8.24□□□□□ -1.09
BEST1-201ENST00000378043 A0A087WX48 190 aa8.24□□□□□ -1.09
BEST1-201ENST00000378043 GNRH2O43555 120 aa8.24□□□□□ -1.09
BEST1-201ENST00000378043 AVPP01185 164 aa8.24□□□□□ -1.09
BEST1-201ENST00000378043 RNASE3P12724 160 aaKnown RBP8.24□□□□□ -1.09
BEST1-201ENST00000378043 RNASE4P34096 147 aaKnown RBP8.24□□□□□ -1.09
BEST1-201ENST00000378043 C14orf178Q8N769 122 aaPredicted RBP8.24□□□□□ -1.09
BEST1-201ENST00000378043 MAPKAPK5-AS1Q8N8E1 139 aa8.24□□□□□ -1.09
BEST1-201ENST00000378043 RPL39LQ96EH5 51 aaKnown RBP8.24□□□□□ -1.09
BEST1-201ENST00000378043 CCL19Q99731 98 aa8.24□□□□□ -1.09
BEST1-201ENST00000378043 RHPN1-AS1Q9BWJ2 59 aa8.24□□□□□ -1.09
BEST1-201ENST00000378043 USP9YO00507 2555 aaPredicted RBP8.24□□□□□ -1.09
BEST1-201ENST00000378043 SUMO2P61956 95 aaKnown RBP8.23□□□□□ -1.09
BEST1-201ENST00000378043 CHAC1Q9BUX1 264 aa8.23□□□□□ -1.09
BEST1-201ENST00000378043 PIEZO1Q92508 2521 aa8.23□□□□□ -1.09
BEST1-201ENST00000378043 IGSF10Q6WRI0 2623 aa8.23□□□□□ -1.09
BEST1-201ENST00000378043 SRD5A1P18405 259 aa8.23□□□□□ -1.09
BEST1-201ENST00000378043 S100A4P26447 101 aaKnown RBP8.23□□□□□ -1.09
BEST1-201ENST00000378043 ASIPP42127 132 aa8.23□□□□□ -1.09
BEST1-201ENST00000378043 CFHR3Q02985 330 aa8.23□□□□□ -1.09
BEST1-201ENST00000378043 DPH3P1Q9H4G8 78 aa8.23□□□□□ -1.09
BEST1-201ENST00000378043 PHLDA3Q9Y5J5 127 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms