RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 ATP6V0BQ99437 205 aa10.67□□□□□ -0.7
C9orf47-203ENST00000375851 MYMXA0A1B0GTQ4 84 aa10.67□□□□□ -0.7
C9orf47-203ENST00000375851 GP9P14770 177 aa10.67□□□□□ -0.7
C9orf47-203ENST00000375851 SMIM2Q9BVW6 85 aa10.67□□□□□ -0.7
C9orf47-203ENST00000375851 HOXD3P31249 432 aaPredicted RBP10.67□□□□□ -0.7
C9orf47-203ENST00000375851 KIAA1549LQ6ZVL6 1849 aa10.67□□□□□ -0.7
C9orf47-203ENST00000375851 I3L3M4 83 aa10.67□□□□□ -0.7
C9orf47-203ENST00000375851 NEGR1Q7Z3B1 354 aa10.67□□□□□ -0.7
C9orf47-203ENST00000375851 C10orf126Q8N4M7 172 aa10.67□□□□□ -0.7
C9orf47-203ENST00000375851 Q8N7P7 452 aa10.67□□□□□ -0.7
C9orf47-203ENST00000375851 NRGNQ92686 78 aa10.67□□□□□ -0.7
C9orf47-203ENST00000375851 EREGO14944 169 aa10.66□□□□□ -0.7
C9orf47-203ENST00000375851 AZU1P20160 251 aa10.66□□□□□ -0.7
C9orf47-203ENST00000375851 ZFP36P26651 326 aaKnown RBP10.66□□□□□ -0.7
C9orf47-203ENST00000375851 IGKV1OR2-108A0A075B7D4 117 aa10.66□□□□□ -0.7
C9orf47-203ENST00000375851 IGLC2P0DOY2 106 aa10.66□□□□□ -0.7
C9orf47-203ENST00000375851 IGLC3P0DOY3 106 aa10.66□□□□□ -0.7
C9orf47-203ENST00000375851 DAZAP2Q15038 168 aaPredicted RBP10.66□□□□□ -0.7
C9orf47-203ENST00000375851 S100A7L2Q5SY68 101 aa10.66□□□□□ -0.7
C9orf47-203ENST00000375851 CENPFP49454 3210 aa10.66□□□□□ -0.7
C9orf47-203ENST00000375851 E7EUB6 86 aa10.66□□□□□ -0.7
C9orf47-203ENST00000375851 GHRHP01286 108 aa10.66□□□□□ -0.7
C9orf47-203ENST00000375851 FOXE3Q13461 319 aa10.66□□□□□ -0.7
C9orf47-203ENST00000375851 DEFB113Q30KQ7 82 aa10.66□□□□□ -0.7
C9orf47-203ENST00000375851 GAGE12BA1L429 117 aa10.65□□□□□ -0.7
C9orf47-203ENST00000375851 CD5LO43866 347 aa10.65□□□□□ -0.7
C9orf47-203ENST00000375851 GAGE7O76087 117 aa10.65□□□□□ -0.7
C9orf47-203ENST00000375851 GAGE12FP0CL80 117 aa10.65□□□□□ -0.7
C9orf47-203ENST00000375851 GAGE12GP0CL81 117 aa10.65□□□□□ -0.7
C9orf47-203ENST00000375851 GAGE12IP0CL82 117 aa10.65□□□□□ -0.7
C9orf47-203ENST00000375851 JPT2Q9H910 190 aa10.65□□□□□ -0.7
C9orf47-203ENST00000375851 IGLV2-23P01705 113 aa10.65□□□□□ -0.7
C9orf47-203ENST00000375851 PMVKQ15126 192 aa10.65□□□□□ -0.7
C9orf47-203ENST00000375851 ZNRF2Q8NHG8 242 aa10.65□□□□□ -0.7
C9orf47-203ENST00000375851 LENEPQ9Y5L5 61 aa10.65□□□□□ -0.7
C9orf47-203ENST00000375851 MRPL52Q86TS9 123 aaKnown RBP10.65□□□□□ -0.71
C9orf47-203ENST00000375851 PYGO2Q9BRQ0 406 aa10.65□□□□□ -0.71
C9orf47-203ENST00000375851 CEP295Q9C0D2 2601 aa10.65□□□□□ -0.71
C9orf47-203ENST00000375851 PROP1O75360 226 aa10.64□□□□□ -0.71
C9orf47-203ENST00000375851 IGLL1P15814 213 aa10.64□□□□□ -0.71
C9orf47-203ENST00000375851 DEFB136Q30KP8 78 aa10.64□□□□□ -0.71
C9orf47-203ENST00000375851 TMEM141Q96I45 108 aa10.64□□□□□ -0.71
C9orf47-203ENST00000375851 FAM167A-AS1Q96KT0 104 aa10.64□□□□□ -0.71
C9orf47-203ENST00000375851 KLF2Q9Y5W3 355 aaPredicted RBP10.64□□□□□ -0.71
C9orf47-203ENST00000375851 LGALS1P09382 135 aaKnown RBP10.64□□□□□ -0.71
C9orf47-203ENST00000375851 ATXN8Q156A1 80 aa10.64□□□□□ -0.71
C9orf47-203ENST00000375851 Q6ZPA2 131 aa10.64□□□□□ -0.71
C9orf47-203ENST00000375851 MRPL53Q96EL3 112 aaKnown RBP10.64□□□□□ -0.71
C9orf47-203ENST00000375851 ZNF625Q96I27 306 aaPredicted RBP10.64□□□□□ -0.71
C9orf47-203ENST00000375851 AJUBAQ96IF1 538 aa10.64□□□□□ -0.71
C9orf47-203ENST00000375851 TEX22C9J3V5 150 aa10.64□□□□□ -0.71
C9orf47-203ENST00000375851 PLXNB1O43157 2135 aa10.64□□□□□ -0.71
C9orf47-203ENST00000375851 GNRH2O43555 120 aa10.64□□□□□ -0.71
C9orf47-203ENST00000375851 CRIP3Q6Q6R5 217 aa10.64□□□□□ -0.71
C9orf47-203ENST00000375851 PGPEP1Q9NXJ5 209 aa10.64□□□□□ -0.71
C9orf47-203ENST00000375851 MRPL36Q9P0J6 103 aaKnown RBP10.64□□□□□ -0.71
C9orf47-203ENST00000375851 IGHV3-38A0A0C4DH36 116 aa10.63□□□□□ -0.71
C9orf47-203ENST00000375851 SS18Q15532 418 aa10.63□□□□□ -0.71
C9orf47-203ENST00000375851 LGALS9BQ3B8N2 356 aa10.63□□□□□ -0.71
C9orf47-203ENST00000375851 LGALS9CQ6DKI2 356 aa10.63□□□□□ -0.71
C9orf47-203ENST00000375851 MRPL35Q9NZE8 188 aaKnown RBP10.63□□□□□ -0.71
C9orf47-203ENST00000375851 BUB3O43684 328 aa10.63□□□□□ -0.71
C9orf47-203ENST00000375851 KMT2EQ8IZD2 1858 aa10.63□□□□□ -0.71
C9orf47-203ENST00000375851 RBAKDNA6NC62 111 aa10.63□□□□□ -0.71
C9orf47-203ENST00000375851 INS-IGF2F8WCM5 200 aa10.63□□□□□ -0.71
C9orf47-203ENST00000375851 CGB3P0DN86 165 aa10.63□□□□□ -0.71
C9orf47-203ENST00000375851 CGB7P0DN87 165 aa10.63□□□□□ -0.71
C9orf47-203ENST00000375851 C22orf34Q6ZV56 151 aa10.63□□□□□ -0.71
C9orf47-203ENST00000375851 CFHR4Q92496 578 aa10.63□□□□□ -0.71
C9orf47-203ENST00000375851 F5H768 121 aa10.63□□□□□ -0.71
C9orf47-203ENST00000375851 FOXI2Q6ZQN5 318 aa10.63□□□□□ -0.71
C9orf47-203ENST00000375851 MTURNQ8N3F0 131 aa10.63□□□□□ -0.71
C9orf47-203ENST00000375851 GOLGB1Q14789 3259 aaKnown RBP10.63□□□□□ -0.71
C9orf47-203ENST00000375851 DAD1P61803 113 aa10.62□□□□□ -0.71
C9orf47-203ENST00000375851 WIPF2Q8TF74 440 aaPredicted RBP10.62□□□□□ -0.71
C9orf47-203ENST00000375851 SNHG12Q9BXW3 62 aa10.62□□□□□ -0.71
C9orf47-203ENST00000375851 C5orf56Q8N8D9 126 aa10.62□□□□□ -0.71
C9orf47-203ENST00000375851 TRBV25-1A0A075B6N4 114 aa10.62□□□□□ -0.71
C9orf47-203ENST00000375851 UBE2V1Q13404 147 aa10.62□□□□□ -0.71
C9orf47-203ENST00000375851 GATD1Q8NB37 220 aa10.62□□□□□ -0.71
C9orf47-203ENST00000375851 CST9LQ9H4G1 147 aa10.61□□□□□ -0.71
C9orf47-203ENST00000375851 CRYGCP07315 174 aa10.61□□□□□ -0.71
C9orf47-203ENST00000375851 DLX4Q92988 240 aaPredicted RBP10.61□□□□□ -0.71
C9orf47-203ENST00000375851 C20orf78Q9BR46 151 aa10.61□□□□□ -0.71
C9orf47-203ENST00000375851 C11orf1Q9H5F2 150 aa10.61□□□□□ -0.71
C9orf47-203ENST00000375851 SPRY2O43597 315 aa10.61□□□□□ -0.71
C9orf47-203ENST00000375851 F8VRH5 84 aa10.61□□□□□ -0.71
C9orf47-203ENST00000375851 C10orf142B7Z368 130 aa10.6□□□□□ -0.71
C9orf47-203ENST00000375851 ZNF124Q15973 351 aa10.6□□□□□ -0.71
C9orf47-203ENST00000375851 UBE2DNLQ8IWF7 75 aa10.6□□□□□ -0.71
C9orf47-203ENST00000375851 CCL24O00175 119 aa10.6□□□□□ -0.71
C9orf47-203ENST00000375851 HLA-DRB4P13762 266 aa10.6□□□□□ -0.71
C9orf47-203ENST00000375851 HLA-DRB4X5D2U9 266 aa10.6□□□□□ -0.71
C9orf47-203ENST00000375851 P0C879 139 aa10.6□□□□□ -0.71
C9orf47-203ENST00000375851 COA6Q5JTJ3 125 aaKnown RBP10.59□□□□□ -0.71
C9orf47-203ENST00000375851 LEPROTO15243 131 aa10.59□□□□□ -0.71
C9orf47-203ENST00000375851 BRWD1-AS2P59051 145 aa10.59□□□□□ -0.71
C9orf47-203ENST00000375851 TSSC4Q9Y5U2 329 aaPredicted RBP10.59□□□□□ -0.71
C9orf47-203ENST00000375851 COX11Q9Y6N1 276 aa10.59□□□□□ -0.71
C9orf47-203ENST00000375851 A0A1B0GV72 72 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms