RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 USP9YO00507 2555 aaPredicted RBP10.82□□□□□ -0.68
CLCNKA-202ENST00000375692 LAGE3Q14657 143 aa10.82□□□□□ -0.68
CLCNKA-202ENST00000375692 POLQO75417 2590 aa10.82□□□□□ -0.68
CLCNKA-202ENST00000375692 IGHV7-4-1A0A0J9YVY3 117 aa10.82□□□□□ -0.68
CLCNKA-202ENST00000375692 ZNF502Q8TBZ5 544 aa10.82□□□□□ -0.68
CLCNKA-202ENST00000375692 SMPXQ9UHP9 88 aa10.82□□□□□ -0.68
CLCNKA-202ENST00000375692 TENM4Q6N022 2769 aa10.82□□□□□ -0.68
CLCNKA-202ENST00000375692 TRAV8-2A0A0B4J237 113 aa10.81□□□□□ -0.68
CLCNKA-202ENST00000375692 CLPSL1A2RUU4 121 aa10.81□□□□□ -0.68
CLCNKA-202ENST00000375692 IGLL5B9A064 214 aa10.81□□□□□ -0.68
CLCNKA-202ENST00000375692 M0R1W7 72 aa10.81□□□□□ -0.68
CLCNKA-202ENST00000375692 CLEC19AQ6UXS0 136 aa10.81□□□□□ -0.68
CLCNKA-202ENST00000375692 Q8N9W7 124 aa10.81□□□□□ -0.68
CLCNKA-202ENST00000375692 FBN2P35556 2912 aa10.81□□□□□ -0.68
CLCNKA-202ENST00000375692 SCGB2A1O75556 95 aa10.81□□□□□ -0.68
CLCNKA-202ENST00000375692 AMTNQ6UX39 209 aa10.81□□□□□ -0.68
CLCNKA-202ENST00000375692 MTURNQ8N3F0 131 aa10.81□□□□□ -0.68
CLCNKA-202ENST00000375692 KLK15Q9H2R5 256 aa10.81□□□□□ -0.68
CLCNKA-202ENST00000375692 LINC01548A6NM66 108 aa10.8□□□□□ -0.68
CLCNKA-202ENST00000375692 E9PLD3 99 aa10.8□□□□□ -0.68
CLCNKA-202ENST00000375692 H3BMG7 143 aa10.8□□□□□ -0.68
CLCNKA-202ENST00000375692 J3KRW8 73 aa10.8□□□□□ -0.68
CLCNKA-202ENST00000375692 PSMG4Q5JS54 123 aa10.8□□□□□ -0.68
CLCNKA-202ENST00000375692 CCDC144NLQ6NUI1 221 aa10.8□□□□□ -0.68
CLCNKA-202ENST00000375692 TIMD4Q96H15 378 aa10.8□□□□□ -0.68
CLCNKA-202ENST00000375692 A0A087WX48 190 aa10.8□□□□□ -0.68
CLCNKA-202ENST00000375692 G3V318 75 aa10.8□□□□□ -0.68
CLCNKA-202ENST00000375692 ZFP36P26651 326 aaKnown RBP10.8□□□□□ -0.68
CLCNKA-202ENST00000375692 C12orf74Q32Q52 190 aa10.8□□□□□ -0.68
CLCNKA-202ENST00000375692 SPANXN1Q5VSR9 72 aa10.8□□□□□ -0.68
CLCNKA-202ENST00000375692 GTSF1LQ9H1H1 148 aa10.8□□□□□ -0.68
CLCNKA-202ENST00000375692 IGF1P05019 195 aa10.79□□□□□ -0.68
CLCNKA-202ENST00000375692 TMEM78Q5T7P6 136 aa10.79□□□□□ -0.68
CLCNKA-202ENST00000375692 FOXI2Q6ZQN5 318 aa10.79□□□□□ -0.68
CLCNKA-202ENST00000375692 SH2D6Q7Z4S9 175 aa10.79□□□□□ -0.68
CLCNKA-202ENST00000375692 HIST1H4GQ99525 98 aa10.79□□□□□ -0.68
CLCNKA-202ENST00000375692 RBAKDNA6NC62 111 aa10.79□□□□□ -0.68
CLCNKA-202ENST00000375692 H3BVH4 76 aa10.79□□□□□ -0.68
CLCNKA-202ENST00000375692 ATP6V0E1O15342 81 aa10.79□□□□□ -0.68
CLCNKA-202ENST00000375692 LCNL1Q6ZST4 164 aa10.79□□□□□ -0.68
CLCNKA-202ENST00000375692 ZNF479Q96JC4 524 aa10.79□□□□□ -0.68
CLCNKA-202ENST00000375692 CCDC140Q96MF4 163 aa10.79□□□□□ -0.68
CLCNKA-202ENST00000375692 PTPN13Q12923 2485 aa10.79□□□□□ -0.68
CLCNKA-202ENST00000375692 EBI3Q14213 229 aa10.78□□□□□ -0.68
CLCNKA-202ENST00000375692 NRGNQ92686 78 aa10.78□□□□□ -0.68
CLCNKA-202ENST00000375692 HELZ2Q9BYK8 2649 aaKnown RBP10.78□□□□□ -0.68
CLCNKA-202ENST00000375692 PRR9Q5T870 116 aa10.78□□□□□ -0.68
CLCNKA-202ENST00000375692 C8orf86Q6ZUL3 223 aa10.78□□□□□ -0.68
CLCNKA-202ENST00000375692 SLC50A1Q9BRV3 221 aa10.78□□□□□ -0.68
CLCNKA-202ENST00000375692 ABCA12Q86UK0 2595 aa10.78□□□□□ -0.68
CLCNKA-202ENST00000375692 AZU1P20160 251 aa10.77□□□□□ -0.68
CLCNKA-202ENST00000375692 SAMD13Q5VXD3 122 aa10.77□□□□□ -0.68
CLCNKA-202ENST00000375692 FAM110DQ8TAY7 271 aaPredicted RBP10.77□□□□□ -0.68
CLCNKA-202ENST00000375692 SPANXB1Q9NS25 103 aaPredicted RBP10.77□□□□□ -0.68
CLCNKA-202ENST00000375692 ETDBQ3ZM63 59 aa10.77□□□□□ -0.69
CLCNKA-202ENST00000375692 TSSC4Q9Y5U2 329 aaPredicted RBP10.77□□□□□ -0.69
CLCNKA-202ENST00000375692 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.76□□□□□ -0.69
CLCNKA-202ENST00000375692 PRSS47A8MTI9 375 aa10.76□□□□□ -0.69
CLCNKA-202ENST00000375692 SMAGPQ0VAQ4 97 aa10.76□□□□□ -0.69
CLCNKA-202ENST00000375692 CELSR1Q9NYQ6 3014 aa10.76□□□□□ -0.69
CLCNKA-202ENST00000375692 HLA-DRB4P13762 266 aa10.75□□□□□ -0.69
CLCNKA-202ENST00000375692 DEFB1P60022 68 aa10.75□□□□□ -0.69
CLCNKA-202ENST00000375692 HLA-DRB4X5D2U9 266 aa10.75□□□□□ -0.69
CLCNKA-202ENST00000375692 DOPEY2Q9Y3R5 2298 aa10.75□□□□□ -0.69
CLCNKA-202ENST00000375692 F8W1H4 67 aa10.75□□□□□ -0.69
CLCNKA-202ENST00000375692 M0R381 172 aa10.75□□□□□ -0.69
CLCNKA-202ENST00000375692 PLNP26678 52 aa10.75□□□□□ -0.69
CLCNKA-202ENST00000375692 RAB9AP51151 201 aa10.75□□□□□ -0.69
CLCNKA-202ENST00000375692 TRBV7-3A0A075B6L6 115 aa10.74□□□□□ -0.69
CLCNKA-202ENST00000375692 H7C1H1 209 aa10.74□□□□□ -0.69
CLCNKA-202ENST00000375692 RPL39LQ96EH5 51 aaKnown RBP10.74□□□□□ -0.69
CLCNKA-202ENST00000375692 SCGB3A1Q96QR1 104 aa10.74□□□□□ -0.69
CLCNKA-202ENST00000375692 SMIM2Q9BVW6 85 aa10.74□□□□□ -0.69
CLCNKA-202ENST00000375692 CYSLTR1Q9Y271 337 aa10.74□□□□□ -0.69
CLCNKA-202ENST00000375692 F8VRH5 84 aa10.74□□□□□ -0.69
CLCNKA-202ENST00000375692 MINOS1Q5TGZ0 78 aa10.74□□□□□ -0.69
CLCNKA-202ENST00000375692 C9orf47Q6ZRZ4 202 aa10.74□□□□□ -0.69
CLCNKA-202ENST00000375692 C20orf173Q96LM9 149 aa10.74□□□□□ -0.69
CLCNKA-202ENST00000375692 METTL26Q96S19 204 aa10.74□□□□□ -0.69
CLCNKA-202ENST00000375692 SIGMAR1Q99720 223 aa10.74□□□□□ -0.69
CLCNKA-202ENST00000375692 SPAG8Q99932 426 aaPredicted RBP10.74□□□□□ -0.69
CLCNKA-202ENST00000375692 CHTOPQ9Y3Y2 248 aaKnown RBP10.74□□□□□ -0.69
CLCNKA-202ENST00000375692 MINOS1-NBL1R4GNA1 71 aa10.74□□□□□ -0.69
CLCNKA-202ENST00000375692 GAGE12HA6NDE8 117 aa10.73□□□□□ -0.69
CLCNKA-202ENST00000375692 OOSP1A8MZH6 123 aa10.73□□□□□ -0.69
CLCNKA-202ENST00000375692 INSL3P51460 131 aa10.73□□□□□ -0.69
CLCNKA-202ENST00000375692 TAL2Q16559 108 aa10.73□□□□□ -0.69
CLCNKA-202ENST00000375692 DEFB104AQ8WTQ1 72 aa10.73□□□□□ -0.69
CLCNKA-202ENST00000375692 AJUBAQ96IF1 538 aa10.73□□□□□ -0.69
CLCNKA-202ENST00000375692 C16orf92Q96LL3 132 aa10.73□□□□□ -0.69
CLCNKA-202ENST00000375692 LINC00527Q9UJ94 153 aa10.73□□□□□ -0.69
CLCNKA-202ENST00000375692 IGHV4-4A0A075B6R2 117 aa10.73□□□□□ -0.69
CLCNKA-202ENST00000375692 MYMXA0A1B0GTQ4 84 aa10.73□□□□□ -0.69
CLCNKA-202ENST00000375692 RRN3P1Q2M238 152 aa10.73□□□□□ -0.69
CLCNKA-202ENST00000375692 C14orf178Q8N769 122 aaPredicted RBP10.73□□□□□ -0.69
CLCNKA-202ENST00000375692 RASL10AQ92737 203 aa10.73□□□□□ -0.69
CLCNKA-202ENST00000375692 OR11H12B2RN74 326 aa10.72□□□□□ -0.69
CLCNKA-202ENST00000375692 CD300EQ496F6 205 aaPredicted RBP10.72□□□□□ -0.69
CLCNKA-202ENST00000375692 C1orf122Q6ZSJ8 110 aa10.72□□□□□ -0.69
CLCNKA-202ENST00000375692 OR11H1Q8NG94 326 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms