RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 CEND1Q8N111 149 aa13.21□□□□□ -0.29
VARS-215ENST00000375663 C10orf126Q8N4M7 172 aa13.21□□□□□ -0.29
VARS-215ENST00000375663 AGPAT4-IT1Q9H0P7 198 aa13.21□□□□□ -0.29
VARS-215ENST00000375663 IGHV3-73A0A0B4J1V6 119 aa13.21□□□□□ -0.3
VARS-215ENST00000375663 C19orf71A6NCJ1 209 aa13.21□□□□□ -0.3
VARS-215ENST00000375663 A0A1B0GXF2 115 aa13.2□□□□□ -0.3
VARS-215ENST00000375663 LINC00322Q6ZN03 302 aaPredicted RBP13.2□□□□□ -0.3
VARS-215ENST00000375663 PIP4P1Q86T03 277 aa13.2□□□□□ -0.3
VARS-215ENST00000375663 F8W1H4 67 aa13.2□□□□□ -0.3
VARS-215ENST00000375663 GAGE2BQ13066 116 aa13.2□□□□□ -0.3
VARS-215ENST00000375663 GAGE2EQ4V326 116 aa13.2□□□□□ -0.3
VARS-215ENST00000375663 GAGE2DQ9UEU5 116 aa13.2□□□□□ -0.3
VARS-215ENST00000375663 C11orf44Q8N8P7 122 aa13.2□□□□□ -0.3
VARS-215ENST00000375663 DAZ1Q9NQZ3 744 aaKnown RBP13.2□□□□□ -0.3
VARS-215ENST00000375663 SPTBN4Q9H254 2564 aa13.2□□□□□ -0.3
VARS-215ENST00000375663 TMEM101Q96IK0 257 aa13.2□□□□□ -0.3
VARS-215ENST00000375663 ATG2AQ2TAZ0 1938 aa13.19□□□□□ -0.3
VARS-215ENST00000375663 CRYGCP07315 174 aa13.19□□□□□ -0.3
VARS-215ENST00000375663 SCGB1A1P11684 91 aa13.19□□□□□ -0.3
VARS-215ENST00000375663 HLA-DRB4P13762 266 aa13.19□□□□□ -0.3
VARS-215ENST00000375663 ANXA2RQ3ZCQ2 193 aa13.19□□□□□ -0.3
VARS-215ENST00000375663 PRSS22Q9GZN4 317 aa13.19□□□□□ -0.3
VARS-215ENST00000375663 YAE1D1Q9NRH1 226 aa13.19□□□□□ -0.3
VARS-215ENST00000375663 HLA-DRB4X5D2U9 266 aa13.19□□□□□ -0.3
VARS-215ENST00000375663 SPINK8P0C7L1 97 aa13.19□□□□□ -0.3
VARS-215ENST00000375663 M0R2P5 195 aa13.18□□□□□ -0.3
VARS-215ENST00000375663 NPC2P61916 151 aa13.18□□□□□ -0.3
VARS-215ENST00000375663 MBD6Q96DN6 1003 aa13.18□□□□□ -0.3
VARS-215ENST00000375663 TRBV25-1A0A075B6N4 114 aa13.18□□□□□ -0.3
VARS-215ENST00000375663 SAP30O75446 220 aa13.18□□□□□ -0.3
VARS-215ENST00000375663 NEGR1Q7Z3B1 354 aa13.18□□□□□ -0.3
VARS-215ENST00000375663 TEX22C9J3V5 150 aa13.18□□□□□ -0.3
VARS-215ENST00000375663 ZFAND6Q6FIF0 208 aa13.18□□□□□ -0.3
VARS-215ENST00000375663 PTPRSQ13332 1948 aa13.18□□□□□ -0.3
VARS-215ENST00000375663 A0A087WX48 190 aa13.17□□□□□ -0.3
VARS-215ENST00000375663 TRAV8-4A0A0B4J246 113 aa13.17□□□□□ -0.3
VARS-215ENST00000375663 C9JAW5 83 aa13.17□□□□□ -0.3
VARS-215ENST00000375663 IGLV1-47P01700 117 aa13.17□□□□□ -0.3
VARS-215ENST00000375663 CFHR4Q92496 578 aa13.17□□□□□ -0.3
VARS-215ENST00000375663 TAL2Q16559 108 aa13.17□□□□□ -0.3
VARS-215ENST00000375663 RUSC1-AS1Q66K80 236 aa13.17□□□□□ -0.3
VARS-215ENST00000375663 RNASE1P07998 156 aaKnown RBP13.17□□□□□ -0.3
VARS-215ENST00000375663 PMVKQ15126 192 aa13.17□□□□□ -0.3
VARS-215ENST00000375663 C12orf74Q32Q52 190 aa13.17□□□□□ -0.3
VARS-215ENST00000375663 TMEM95Q3KNT9 176 aa13.17□□□□□ -0.3
VARS-215ENST00000375663 TTTY13Q9BZ97 58 aa13.17□□□□□ -0.3
VARS-215ENST00000375663 SPXQ9BT56 116 aa13.16□□□□□ -0.3
VARS-215ENST00000375663 LRP4O75096 1905 aa13.16□□□□□ -0.3
VARS-215ENST00000375663 SDHAF1A6NFY7 115 aa13.16□□□□□ -0.3
VARS-215ENST00000375663 CTRLP40313 264 aa13.16□□□□□ -0.3
VARS-215ENST00000375663 FOXE3Q13461 319 aa13.16□□□□□ -0.3
VARS-215ENST00000375663 DSCAML1Q8TD84 2053 aa13.15□□□□□ -0.3
VARS-215ENST00000375663 IGLV11-55A0A075B6I3 123 aa13.15□□□□□ -0.3
VARS-215ENST00000375663 MLST8Q9BVC4 326 aa13.15□□□□□ -0.3
VARS-215ENST00000375663 Q8N7P7 452 aa13.15□□□□□ -0.3
VARS-215ENST00000375663 PEMTQ9UBM1 199 aa13.15□□□□□ -0.3
VARS-215ENST00000375663 NACAE9PAV3 2078 aa13.15□□□□□ -0.31
VARS-215ENST00000375663 TRBV7-9A0A0J9YWB2 115 aa13.15□□□□□ -0.31
VARS-215ENST00000375663 GAGE12HA6NDE8 117 aa13.15□□□□□ -0.31
VARS-215ENST00000375663 OR11H6Q8NGC7 330 aa13.15□□□□□ -0.31
VARS-215ENST00000375663 LINC00574Q9H8X3 128 aa13.15□□□□□ -0.31
VARS-215ENST00000375663 CDH23Q9H251 3354 aa13.14□□□□□ -0.31
VARS-215ENST00000375663 ANKRD11Q6UB99 2663 aaPredicted RBP13.14□□□□□ -0.31
VARS-215ENST00000375663 K7ENP7 123 aa13.14□□□□□ -0.31
VARS-215ENST00000375663 CTSGP08311 255 aa13.14□□□□□ -0.31
VARS-215ENST00000375663 RNF114Q9Y508 228 aa13.14□□□□□ -0.31
VARS-215ENST00000375663 TRGV2A0A075B6R0 118 aa13.14□□□□□ -0.31
VARS-215ENST00000375663 A0A1W2PRX2 142 aa13.14□□□□□ -0.31
VARS-215ENST00000375663 TP73-AS1Q9UF72 201 aa13.14□□□□□ -0.31
VARS-215ENST00000375663 TEX48A0A1B0GUV7 120 aa13.14□□□□□ -0.31
VARS-215ENST00000375663 C2orf82Q6UX34 121 aa13.14□□□□□ -0.31
VARS-215ENST00000375663 SPRY2O43597 315 aa13.13□□□□□ -0.31
VARS-215ENST00000375663 BOD1L2Q8IYS8 172 aa13.13□□□□□ -0.31
VARS-215ENST00000375663 TIMM21Q9BVV7 248 aa13.13□□□□□ -0.31
VARS-215ENST00000375663 TRBV20-1A0A075B6N2 111 aa13.13□□□□□ -0.31
VARS-215ENST00000375663 C20orf78Q9BR46 151 aa13.13□□□□□ -0.31
VARS-215ENST00000375663 ZNF462Q96JM2 2506 aa13.13□□□□□ -0.31
VARS-215ENST00000375663 ATXN8Q156A1 80 aa13.13□□□□□ -0.31
VARS-215ENST00000375663 CEP192Q8TEP8 1941 aa13.13□□□□□ -0.31
VARS-215ENST00000375663 GRNP28799 593 aaKnown RBP13.12□□□□□ -0.31
VARS-215ENST00000375663 FXYD2P54710 66 aa13.12□□□□□ -0.31
VARS-215ENST00000375663 PRSS29PA6NIE9 313 aa13.12□□□□□ -0.31
VARS-215ENST00000375663 TMEM141Q96I45 108 aa13.12□□□□□ -0.31
VARS-215ENST00000375663 NDUFA4O00483 81 aa13.12□□□□□ -0.31
VARS-215ENST00000375663 AZU1P20160 251 aa13.12□□□□□ -0.31
VARS-215ENST00000375663 TRPT1Q86TN4 253 aaKnown RBP13.12□□□□□ -0.31
VARS-215ENST00000375663 LY6G5BQ8NDX9 201 aa13.12□□□□□ -0.31
VARS-215ENST00000375663 IGHV7-81A0A0B4J1V7 117 aa13.11□□□□□ -0.31
VARS-215ENST00000375663 LOXL1Q08397 574 aaPredicted RBP13.11□□□□□ -0.31
VARS-215ENST00000375663 PIP4P2Q8N4L2 257 aa13.11□□□□□ -0.31
VARS-215ENST00000375663 STHQ8IWL8 128 aa13.11□□□□□ -0.31
VARS-215ENST00000375663 NPBQ8NG41 125 aa13.11□□□□□ -0.31
VARS-215ENST00000375663 SPINK13Q1W4C9 94 aa13.11□□□□□ -0.31
VARS-215ENST00000375663 PPDPFLQ8WWR9 84 aa13.11□□□□□ -0.31
VARS-215ENST00000375663 WI2-2373I1.2A0A1W2PRP0 233 aa13.1□□□□□ -0.31
VARS-215ENST00000375663 RBAKDNA6NC62 111 aa13.1□□□□□ -0.31
VARS-215ENST00000375663 MORN3Q6PF18 240 aaPredicted RBP13.1□□□□□ -0.31
VARS-215ENST00000375663 SPATA12Q7Z6I5 190 aa13.1□□□□□ -0.31
VARS-215ENST00000375663 ABCA12Q86UK0 2595 aa13.1□□□□□ -0.31
VARS-215ENST00000375663 B4DSR2 109 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms