RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 NEGR1Q7Z3B1 354 aa13.98□□□□□ -0.17
PTPDC1-202ENST00000375360 SYS1-DBNDD2H3BUS1 97 aa13.98□□□□□ -0.17
PTPDC1-202ENST00000375360 ZNF295-AS1Q8N0V1 137 aa13.98□□□□□ -0.17
PTPDC1-202ENST00000375360 PRSS46E5RG02 174 aa13.97□□□□□ -0.17
PTPDC1-202ENST00000375360 LINC00574Q9H8X3 128 aa13.97□□□□□ -0.17
PTPDC1-202ENST00000375360 MRPL16Q9NX20 251 aaKnown RBP13.97□□□□□ -0.17
PTPDC1-202ENST00000375360 ADARB2-AS1A8MUL3 147 aa13.97□□□□□ -0.17
PTPDC1-202ENST00000375360 CCL24O00175 119 aa13.97□□□□□ -0.17
PTPDC1-202ENST00000375360 GNRH2O43555 120 aa13.97□□□□□ -0.17
PTPDC1-202ENST00000375360 CIDEAO60543 219 aa13.97□□□□□ -0.17
PTPDC1-202ENST00000375360 LY6G5BQ8NDX9 201 aa13.97□□□□□ -0.17
PTPDC1-202ENST00000375360 NHP2Q9NX24 153 aaKnown RBP13.97□□□□□ -0.17
PTPDC1-202ENST00000375360 LGALS1P09382 135 aaKnown RBP13.97□□□□□ -0.17
PTPDC1-202ENST00000375360 MRPL51Q4U2R6 128 aaKnown RBP13.97□□□□□ -0.17
PTPDC1-202ENST00000375360 ZNF815PA8K554 130 aa13.96□□□□□ -0.17
PTPDC1-202ENST00000375360 H3BUA1 57 aa13.96□□□□□ -0.17
PTPDC1-202ENST00000375360 ZC2HC1BQ5TFG8 222 aa13.96□□□□□ -0.17
PTPDC1-202ENST00000375360 ZNF843Q8N446 348 aa13.96□□□□□ -0.17
PTPDC1-202ENST00000375360 OR9G4Q8NGQ1 327 aa13.96□□□□□ -0.17
PTPDC1-202ENST00000375360 DSCAML1Q8TD84 2053 aa13.96□□□□□ -0.17
PTPDC1-202ENST00000375360 SMIM27A0A1W2PRY6 76 aa13.96□□□□□ -0.17
PTPDC1-202ENST00000375360 TRBV12-3P01733 135 aa13.96□□□□□ -0.17
PTPDC1-202ENST00000375360 TYMSP04818 313 aa13.96□□□□□ -0.17
PTPDC1-202ENST00000375360 CRYGCP07315 174 aa13.96□□□□□ -0.17
PTPDC1-202ENST00000375360 PRADC1Q9BSG0 188 aa13.96□□□□□ -0.17
PTPDC1-202ENST00000375360 WFDC11Q8NEX6 87 aa13.96□□□□□ -0.18
PTPDC1-202ENST00000375360 LTAP01374 205 aa13.95□□□□□ -0.18
PTPDC1-202ENST00000375360 APRG1Q8IVJ8 170 aa13.95□□□□□ -0.18
PTPDC1-202ENST00000375360 ALKBH7Q9BT30 221 aaPredicted RBP13.95□□□□□ -0.18
PTPDC1-202ENST00000375360 Q0VG73 95 aa13.95□□□□□ -0.18
PTPDC1-202ENST00000375360 PRAC2D3DTV9 90 aa13.95□□□□□ -0.18
PTPDC1-202ENST00000375360 STPG4Q8N801 248 aa13.94□□□□□ -0.18
PTPDC1-202ENST00000375360 TRAV13-1A0A0B4J241 112 aa13.94□□□□□ -0.18
PTPDC1-202ENST00000375360 CENPEQ02224 2701 aa13.94□□□□□ -0.18
PTPDC1-202ENST00000375360 EML5Q05BV3 1969 aa13.94□□□□□ -0.18
PTPDC1-202ENST00000375360 GAGE12BA1L429 117 aa13.94□□□□□ -0.18
PTPDC1-202ENST00000375360 GAGE7O76087 117 aa13.94□□□□□ -0.18
PTPDC1-202ENST00000375360 GAGE12FP0CL80 117 aa13.94□□□□□ -0.18
PTPDC1-202ENST00000375360 GAGE12GP0CL81 117 aa13.94□□□□□ -0.18
PTPDC1-202ENST00000375360 GAGE12IP0CL82 117 aa13.94□□□□□ -0.18
PTPDC1-202ENST00000375360 UNQ9165/PRO28630Q6UXU0 137 aa13.94□□□□□ -0.18
PTPDC1-202ENST00000375360 ZNF664Q8N3J9 261 aa13.93□□□□□ -0.18
PTPDC1-202ENST00000375360 IGHG2P01859 326 aa13.93□□□□□ -0.18
PTPDC1-202ENST00000375360 TRAV2A0A0B4J234 112 aa13.93□□□□□ -0.18
PTPDC1-202ENST00000375360 GAGE12JA6NER3 117 aa13.93□□□□□ -0.18
PTPDC1-202ENST00000375360 GAGE1Q13065 139 aa13.93□□□□□ -0.18
PTPDC1-202ENST00000375360 GAGE4Q13068 117 aa13.93□□□□□ -0.18
PTPDC1-202ENST00000375360 GAGE5Q13069 117 aa13.93□□□□□ -0.18
PTPDC1-202ENST00000375360 GAGE13Q4V321 117 aa13.93□□□□□ -0.18
PTPDC1-202ENST00000375360 IGHV4OR15-8A0A075B7B6 117 aa13.92□□□□□ -0.18
PTPDC1-202ENST00000375360 A0A087WW49 117 aa13.92□□□□□ -0.18
PTPDC1-202ENST00000375360 IGHV3-38A0A0C4DH36 116 aa13.92□□□□□ -0.18
PTPDC1-202ENST00000375360 NPYP01303 97 aa13.92□□□□□ -0.18
PTPDC1-202ENST00000375360 NAA38Q9BRA0 125 aaKnown RBP13.92□□□□□ -0.18
PTPDC1-202ENST00000375360 MALP21145 153 aa13.92□□□□□ -0.18
PTPDC1-202ENST00000375360 CFHR4Q92496 578 aa13.92□□□□□ -0.18
PTPDC1-202ENST00000375360 TRANK1O15050 2925 aa13.92□□□□□ -0.18
PTPDC1-202ENST00000375360 H3BUT2 72 aa13.92□□□□□ -0.18
PTPDC1-202ENST00000375360 PLP1P60201 277 aa13.92□□□□□ -0.18
PTPDC1-202ENST00000375360 C11orf71Q6IPW1 123 aa13.92□□□□□ -0.18
PTPDC1-202ENST00000375360 C11orf68Q9H3H3 251 aaKnown RBP13.92□□□□□ -0.18
PTPDC1-202ENST00000375360 IGKV1D-37A0A075B6S9 117 aa13.91□□□□□ -0.18
PTPDC1-202ENST00000375360 SDHAF1A6NFY7 115 aa13.91□□□□□ -0.18
PTPDC1-202ENST00000375360 MSRB1Q9NZV6 116 aa13.91□□□□□ -0.18
PTPDC1-202ENST00000375360 ODF3BA8MYP8 253 aa13.91□□□□□ -0.18
PTPDC1-202ENST00000375360 TSSC4Q9Y5U2 329 aaPredicted RBP13.91□□□□□ -0.18
PTPDC1-202ENST00000375360 A0A087X0K7 114 aa13.9□□□□□ -0.18
PTPDC1-202ENST00000375360 INS-IGF2F8WCM5 200 aa13.9□□□□□ -0.18
PTPDC1-202ENST00000375360 K7ERU9 68 aa13.9□□□□□ -0.18
PTPDC1-202ENST00000375360 C2orf66Q6UXQ4 117 aa13.9□□□□□ -0.18
PTPDC1-202ENST00000375360 EIF4EBP1Q13541 118 aaPredicted RBP13.9□□□□□ -0.18
PTPDC1-202ENST00000375360 CFAP161Q6P656 301 aa13.9□□□□□ -0.18
PTPDC1-202ENST00000375360 WIPF2Q8TF74 440 aaPredicted RBP13.9□□□□□ -0.18
PTPDC1-202ENST00000375360 ATP6V0BQ99437 205 aa13.9□□□□□ -0.18
PTPDC1-202ENST00000375360 NPC2P61916 151 aa13.89□□□□□ -0.19
PTPDC1-202ENST00000375360 TEX43Q6ZNM6 134 aa13.89□□□□□ -0.19
PTPDC1-202ENST00000375360 OR5A1Q8NGJ0 315 aa13.89□□□□□ -0.19
PTPDC1-202ENST00000375360 CBY1Q9Y3M2 126 aa13.89□□□□□ -0.19
PTPDC1-202ENST00000375360 GATA1P15976 413 aaPredicted RBP13.89□□□□□ -0.19
PTPDC1-202ENST00000375360 AZU1P20160 251 aa13.89□□□□□ -0.19
PTPDC1-202ENST00000375360 SIGLEC8Q9NYZ4 499 aa13.89□□□□□ -0.19
PTPDC1-202ENST00000375360 TP53TG1Q9Y2A0 90 aa13.89□□□□□ -0.19
PTPDC1-202ENST00000375360 SPXQ9BT56 116 aa13.88□□□□□ -0.19
PTPDC1-202ENST00000375360 WDFY4Q6ZS81 3184 aa13.88□□□□□ -0.19
PTPDC1-202ENST00000375360 A6NDX4 124 aa13.87□□□□□ -0.19
PTPDC1-202ENST00000375360 Q6ZWC4 215 aa13.87□□□□□ -0.19
PTPDC1-202ENST00000375360 ZNRF2Q8NHG8 242 aa13.87□□□□□ -0.19
PTPDC1-202ENST00000375360 ZNF503Q96F45 646 aa13.87□□□□□ -0.19
PTPDC1-202ENST00000375360 CDH23Q9H251 3354 aa13.87□□□□□ -0.19
PTPDC1-202ENST00000375360 FRMD6-AS1P0C7T7 363 aa13.87□□□□□ -0.19
PTPDC1-202ENST00000375360 WI2-2373I1.2A0A1W2PRP0 233 aa13.87□□□□□ -0.19
PTPDC1-202ENST00000375360 F5H768 121 aa13.87□□□□□ -0.19
PTPDC1-202ENST00000375360 C16orf54Q6UWD8 224 aa13.87□□□□□ -0.19
PTPDC1-202ENST00000375360 TRPT1Q86TN4 253 aaKnown RBP13.87□□□□□ -0.19
PTPDC1-202ENST00000375360 LOXL1Q08397 574 aaPredicted RBP13.86□□□□□ -0.19
PTPDC1-202ENST00000375360 MPV17L2Q567V2 206 aa13.86□□□□□ -0.19
PTPDC1-202ENST00000375360 TNFRSF13BO14836 293 aaPredicted RBP13.86□□□□□ -0.19
PTPDC1-202ENST00000375360 ANKRD17O75179 2603 aaKnown RBP13.86□□□□□ -0.19
PTPDC1-202ENST00000375360 CRPP02741 224 aa13.85□□□□□ -0.19
PTPDC1-202ENST00000375360 HECTD1Q9ULT8 2610 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms