RNA–Protein interactions for RNA: ENST00000375001.7

COL15A1-201, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL15A1, Length 5,496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-201ENST00000375001 G3V318 75 aa15.7■□□□□ 0.1
COL15A1-201ENST00000375001 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.7■□□□□ 0.1
COL15A1-201ENST00000375001 FOXI1Q12951 378 aa15.7■□□□□ 0.1
COL15A1-201ENST00000375001 GATA1P15976 413 aaPredicted RBP15.7■□□□□ 0.1
COL15A1-201ENST00000375001 YLPM1P49750 1951 aaKnown RBP15.69■□□□□ 0.1
COL15A1-201ENST00000375001 PSMB8P28062 276 aa15.69■□□□□ 0.1
COL15A1-201ENST00000375001 SHANK1Q9Y566 2161 aa15.69■□□□□ 0.1
COL15A1-201ENST00000375001 WDR86Q86TI4 376 aa15.69■□□□□ 0.1
COL15A1-201ENST00000375001 BRK1Q8WUW1 75 aa15.69■□□□□ 0.1
COL15A1-201ENST00000375001 PROK2Q9HC23 129 aa15.69■□□□□ 0.1
COL15A1-201ENST00000375001 CSRP1P21291 193 aaKnown RBP15.68■□□□□ 0.1
COL15A1-201ENST00000375001 LMO1P25800 156 aa15.68■□□□□ 0.1
COL15A1-201ENST00000375001 DEFB105AQ8NG35 78 aa15.68■□□□□ 0.1
COL15A1-201ENST00000375001 PLXNA4Q9HCM2 1894 aa15.68■□□□□ 0.1
COL15A1-201ENST00000375001 ZNF503-AS2A6NEH8 195 aa15.68■□□□□ 0.1
COL15A1-201ENST00000375001 LINC01620Q4KN68 170 aa15.67■□□□□ 0.1
COL15A1-201ENST00000375001 A4D1N5 150 aa15.67■□□□□ 0.1
COL15A1-201ENST00000375001 CLPSL2Q6UWE3 100 aa15.67■□□□□ 0.1
COL15A1-201ENST00000375001 G3V4G9 280 aa15.67■□□□□ 0.1
COL15A1-201ENST00000375001 K7EM74 188 aa15.67■□□□□ 0.1
COL15A1-201ENST00000375001 COL6A6A6NMZ7 2263 aa15.67■□□□□ 0.1
COL15A1-201ENST00000375001 TTTY13Q9BZ97 58 aa15.67■□□□□ 0.1
COL15A1-201ENST00000375001 TPSG1Q9NRR2 321 aa15.67■□□□□ 0.1
COL15A1-201ENST00000375001 MUSTN1Q8IVN3 82 aa15.67■□□□□ 0.1
COL15A1-201ENST00000375001 C17orf77Q96MU5 243 aa15.67■□□□□ 0.1
COL15A1-201ENST00000375001 THSD7BQ9C0I4 1608 aa15.66■□□□□ 0.1
COL15A1-201ENST00000375001 B4DSR2 109 aa15.66■□□□□ 0.1
COL15A1-201ENST00000375001 LINC01545Q5VT33 79 aa15.66■□□□□ 0.1
COL15A1-201ENST00000375001 PRR20EP86478 221 aa15.66■□□□□ 0.1
COL15A1-201ENST00000375001 PRR20CP86479 221 aa15.66■□□□□ 0.1
COL15A1-201ENST00000375001 PRR20DP86480 221 aa15.66■□□□□ 0.1
COL15A1-201ENST00000375001 PRR20BP86481 221 aa15.66■□□□□ 0.1
COL15A1-201ENST00000375001 PRR20AP86496 221 aa15.66■□□□□ 0.1
COL15A1-201ENST00000375001 ZNF833PQ6ZTB9 187 aa15.66■□□□□ 0.1
COL15A1-201ENST00000375001 ICOSQ9Y6W8 199 aa15.66■□□□□ 0.1
COL15A1-201ENST00000375001 RNF166Q96A37 237 aaPredicted RBP15.65■□□□□ 0.1
COL15A1-201ENST00000375001 Q6ZR03 302 aa15.65■□□□□ 0.1
COL15A1-201ENST00000375001 IGHV4-28A0A0C4DH34 117 aa15.65■□□□□ 0.1
COL15A1-201ENST00000375001 MBD3L4A6NDZ8 208 aaPredicted RBP15.64■□□□□ 0.1
COL15A1-201ENST00000375001 MBD3L3A6NE82 208 aaPredicted RBP15.64■□□□□ 0.1
COL15A1-201ENST00000375001 MBD3L5A6NJ08 208 aaPredicted RBP15.64■□□□□ 0.1
COL15A1-201ENST00000375001 ZFP2Q6ZN57 461 aa15.64■□□□□ 0.1
COL15A1-201ENST00000375001 MBD3L2Q8NHZ7 208 aaPredicted RBP15.64■□□□□ 0.1
COL15A1-201ENST00000375001 A0A0G2JNJ9 132 aa15.64■□□□□ 0.09
COL15A1-201ENST00000375001 DYNAPQ8N1N2 210 aa15.64■□□□□ 0.09
COL15A1-201ENST00000375001 Q9UFV3 132 aa15.64■□□□□ 0.09
COL15A1-201ENST00000375001 IGHV4-4A0A075B6R2 117 aa15.64■□□□□ 0.09
COL15A1-201ENST00000375001 SPRY2O43597 315 aa15.64■□□□□ 0.09
COL15A1-201ENST00000375001 A0A096LPF7 62 aa15.64■□□□□ 0.09
COL15A1-201ENST00000375001 DUX4L9Q6RFH8 374 aaPredicted RBP15.64■□□□□ 0.09
COL15A1-201ENST00000375001 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.63■□□□□ 0.09
COL15A1-201ENST00000375001 IGKV2-29A2NJV5 120 aaPredicted RBP15.63■□□□□ 0.09
COL15A1-201ENST00000375001 RUSC1-AS1Q66K80 236 aa15.63■□□□□ 0.09
COL15A1-201ENST00000375001 GNRH2O43555 120 aa15.63■□□□□ 0.09
COL15A1-201ENST00000375001 C17orf58Q2M2W7 97 aa15.63■□□□□ 0.09
COL15A1-201ENST00000375001 ANGP03950 147 aaKnown RBP15.62■□□□□ 0.09
COL15A1-201ENST00000375001 HERV-K104P63124 156 aa15.62■□□□□ 0.09
COL15A1-201ENST00000375001 DEFB121Q5J5C9 76 aa15.62■□□□□ 0.09
COL15A1-201ENST00000375001 IGLV3-1P01715 115 aa15.62■□□□□ 0.09
COL15A1-201ENST00000375001 USF3Q68DE3 2245 aa15.62■□□□□ 0.09
COL15A1-201ENST00000375001 XCL1P47992 114 aa15.61■□□□□ 0.09
COL15A1-201ENST00000375001 ZNF134P52741 427 aa15.61■□□□□ 0.09
COL15A1-201ENST00000375001 BPESC1Q9GZL8 116 aa15.61■□□□□ 0.09
COL15A1-201ENST00000375001 FOXE3Q13461 319 aa15.6■□□□□ 0.09
COL15A1-201ENST00000375001 RHOHQ15669 191 aa15.6■□□□□ 0.09
COL15A1-201ENST00000375001 RNF183Q96D59 192 aa15.6■□□□□ 0.09
COL15A1-201ENST00000375001 DSCR9P59020 149 aa15.6■□□□□ 0.09
COL15A1-201ENST00000375001 SLC25A29Q8N8R3 303 aa15.6■□□□□ 0.09
COL15A1-201ENST00000375001 PLXNA2O75051 1894 aa15.6■□□□□ 0.09
COL15A1-201ENST00000375001 CHD3Q12873 2000 aaKnown RBP15.6■□□□□ 0.09
COL15A1-201ENST00000375001 BAALCQ8WXS3 180 aa15.6■□□□□ 0.09
COL15A1-201ENST00000375001 TRAV4A0A0B4J268 109 aa15.6■□□□□ 0.09
COL15A1-201ENST00000375001 CHKB-CPT1BH3BT56 60 aa15.6■□□□□ 0.09
COL15A1-201ENST00000375001 PLA2G2EQ9NZK7 142 aa15.6■□□□□ 0.09
COL15A1-201ENST00000375001 PTH2Q96A98 100 aa15.59■□□□□ 0.09
COL15A1-201ENST00000375001 RBAKDNA6NC62 111 aa15.59■□□□□ 0.09
COL15A1-201ENST00000375001 CRYGBP07316 175 aa15.59■□□□□ 0.09
COL15A1-201ENST00000375001 CACNA1BQ00975 2339 aa15.59■□□□□ 0.09
COL15A1-201ENST00000375001 NDUFA4O00483 81 aa15.58■□□□□ 0.09
COL15A1-201ENST00000375001 FUSP35637 526 aaKnown RBP eCLIP15.58■□□□□ 0.09
COL15A1-201ENST00000375001 RPL39LQ96EH5 51 aaKnown RBP15.58■□□□□ 0.08
COL15A1-201ENST00000375001 ZNF491Q8N8L2 437 aa15.58■□□□□ 0.08
COL15A1-201ENST00000375001 COX7B2Q8TF08 81 aa15.58■□□□□ 0.08
COL15A1-201ENST00000375001 MP68P56378 58 aa15.58■□□□□ 0.08
COL15A1-201ENST00000375001 SRSF2Q01130 221 aaKnown RBP15.58■□□□□ 0.08
COL15A1-201ENST00000375001 AGPAT4-IT1Q9H0P7 198 aa15.58■□□□□ 0.08
COL15A1-201ENST00000375001 C15orf65H3BRN8 121 aa15.57■□□□□ 0.08
COL15A1-201ENST00000375001 A0A0J9YXV3 536 aa15.57■□□□□ 0.08
COL15A1-201ENST00000375001 H0YGX0 51 aa15.57■□□□□ 0.08
COL15A1-201ENST00000375001 MRPL53Q96EL3 112 aaKnown RBP15.57■□□□□ 0.08
COL15A1-201ENST00000375001 SND1-IT1Q9HBX3 110 aa15.57■□□□□ 0.08
COL15A1-201ENST00000375001 PCNX1Q96RV3 2341 aa15.57■□□□□ 0.08
COL15A1-201ENST00000375001 LY6DQ14210 128 aa15.57■□□□□ 0.08
COL15A1-201ENST00000375001 DIAPH2-AS1Q14236 149 aa15.57■□□□□ 0.08
COL15A1-201ENST00000375001 E7EQL1 145 aa15.56■□□□□ 0.08
COL15A1-201ENST00000375001 UBE2E1P51965 193 aa15.56■□□□□ 0.08
COL15A1-201ENST00000375001 C5orf38Q86SI9 138 aa15.56■□□□□ 0.08
COL15A1-201ENST00000375001 ANAPC1Q9H1A4 1944 aa15.56■□□□□ 0.08
COL15A1-201ENST00000375001 DAND5Q8N907 189 aa15.55■□□□□ 0.08
COL15A1-201ENST00000375001 IGHV1-69DA0A0B4J2H0 117 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms