RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 ZNF329Q86UD4 541 aa5.98□□□□□ -1.45
USP48-203ENST00000374732 NCOA6Q14686 2063 aaPredicted RBP5.98□□□□□ -1.45
USP48-203ENST00000374732 SPINK4O60575 86 aa5.98□□□□□ -1.45
USP48-203ENST00000374732 RPL30P62888 115 aaKnown RBP5.98□□□□□ -1.45
USP48-203ENST00000374732 NUP37Q8NFH4 326 aa5.98□□□□□ -1.45
USP48-203ENST00000374732 AGRNO00468 2067 aa5.97□□□□□ -1.45
USP48-203ENST00000374732 LOC100131303A0A0U1RQF7 123 aa5.97□□□□□ -1.45
USP48-203ENST00000374732 TEX49A0A1B0GTD5 131 aa5.97□□□□□ -1.45
USP48-203ENST00000374732 H3BSH0 61 aa5.97□□□□□ -1.45
USP48-203ENST00000374732 PLA2G1BP04054 148 aaKnown RBP5.97□□□□□ -1.45
USP48-203ENST00000374732 GLI4P10075 376 aa5.97□□□□□ -1.45
USP48-203ENST00000374732 CCL3P10147 92 aa5.97□□□□□ -1.45
USP48-203ENST00000374732 C6orf99Q4VX62 202 aa5.97□□□□□ -1.45
USP48-203ENST00000374732 Q6ZSV7 163 aa5.97□□□□□ -1.45
USP48-203ENST00000374732 VSIG2Q96IQ7 327 aa5.97□□□□□ -1.45
USP48-203ENST00000374732 MUC6Q6W4X9 2439 aa5.97□□□□□ -1.45
USP48-203ENST00000374732 NACAE9PAV3 2078 aa5.97□□□□□ -1.45
USP48-203ENST00000374732 IGHV3OR15-7A0A075B7D8 119 aa5.97□□□□□ -1.45
USP48-203ENST00000374732 A0A087WZ39 114 aa5.97□□□□□ -1.45
USP48-203ENST00000374732 LOC389332A0A1B0GUA5 103 aa5.97□□□□□ -1.45
USP48-203ENST00000374732 C15orf62A8K5M9 175 aa5.97□□□□□ -1.45
USP48-203ENST00000374732 CCL4P13236 92 aa5.97□□□□□ -1.45
USP48-203ENST00000374732 GDF5OSQ5U4N7 250 aa5.96□□□□□ -1.45
USP48-203ENST00000374732 FAM27BQ5VT28 67 aa5.96□□□□□ -1.45
USP48-203ENST00000374732 SOSTDC1Q6X4U4 206 aa5.96□□□□□ -1.45
USP48-203ENST00000374732 C1orf147Q96MC9 270 aaPredicted RBP5.96□□□□□ -1.45
USP48-203ENST00000374732 SLC25A15Q9Y619 301 aa5.96□□□□□ -1.45
USP48-203ENST00000374732 HIST1H4AP62805 103 aaKnown RBP5.96□□□□□ -1.46
USP48-203ENST00000374732 Q8N8P6 123 aa5.96□□□□□ -1.46
USP48-203ENST00000374732 CABIN1Q9Y6J0 2220 aa5.96□□□□□ -1.46
USP48-203ENST00000374732 TTC28Q96AY4 2481 aa5.96□□□□□ -1.46
USP48-203ENST00000374732 C19orf71A6NCJ1 209 aa5.96□□□□□ -1.46
USP48-203ENST00000374732 PATE3B3GLJ2 98 aa5.96□□□□□ -1.46
USP48-203ENST00000374732 MRPS36P82909 103 aaKnown RBP5.96□□□□□ -1.46
USP48-203ENST00000374732 CCL13Q99616 98 aa5.96□□□□□ -1.46
USP48-203ENST00000374732 EYSQ5T1H1 3165 aa5.95□□□□□ -1.46
USP48-203ENST00000374732 MYMXA0A1B0GTQ4 84 aa5.95□□□□□ -1.46
USP48-203ENST00000374732 NPYP01303 97 aa5.95□□□□□ -1.46
USP48-203ENST00000374732 ZNF22P17026 224 aaPredicted RBP5.95□□□□□ -1.46
USP48-203ENST00000374732 KRTAP27-1Q3LI81 207 aa5.95□□□□□ -1.46
USP48-203ENST00000374732 FAM104BQ5XKR9 115 aa5.95□□□□□ -1.46
USP48-203ENST00000374732 SPTSSAQ969W0 71 aa5.95□□□□□ -1.46
USP48-203ENST00000374732 Q9HAA7 133 aa5.95□□□□□ -1.46
USP48-203ENST00000374732 ESPL1Q14674 2120 aa5.95□□□□□ -1.46
USP48-203ENST00000374732 ASCC3Q8N3C0 2202 aaKnown RBP5.95□□□□□ -1.46
USP48-203ENST00000374732 BUB1B-PAK6H3BSN5 160 aa5.95□□□□□ -1.46
USP48-203ENST00000374732 FCER1GP30273 86 aa5.95□□□□□ -1.46
USP48-203ENST00000374732 Q6ZPA2 131 aa5.95□□□□□ -1.46
USP48-203ENST00000374732 C5orf38Q86SI9 138 aa5.95□□□□□ -1.46
USP48-203ENST00000374732 MDP1Q86V88 176 aa5.95□□□□□ -1.46
USP48-203ENST00000374732 LYPD5Q6UWN5 251 aa5.94□□□□□ -1.46
USP48-203ENST00000374732 ZNF492Q9P255 531 aa5.94□□□□□ -1.46
USP48-203ENST00000374732 IGKV1-9A0A0C4DH69 117 aa5.94□□□□□ -1.46
USP48-203ENST00000374732 H3BMM0 161 aa5.94□□□□□ -1.46
USP48-203ENST00000374732 HOXA4Q00056 320 aaPredicted RBP5.94□□□□□ -1.46
USP48-203ENST00000374732 ZNF876PQ49A33 203 aa5.94□□□□□ -1.46
USP48-203ENST00000374732 LINC00643Q86TS7 51 aa5.94□□□□□ -1.46
USP48-203ENST00000374732 GGNQ86UU5 652 aa5.94□□□□□ -1.46
USP48-203ENST00000374732 MAPKAPK5-AS1Q8N8E1 139 aa5.94□□□□□ -1.46
USP48-203ENST00000374732 UBE2WQ96B02 151 aa5.94□□□□□ -1.46
USP48-203ENST00000374732 TIMM8BQ9Y5J9 83 aaPredicted RBP5.94□□□□□ -1.46
USP48-203ENST00000374732 TRIOO75962 3097 aa5.94□□□□□ -1.46
USP48-203ENST00000374732 ALPK2Q86TB3 2170 aa5.93□□□□□ -1.46
USP48-203ENST00000374732 KLLNB2CW77 178 aa5.93□□□□□ -1.46
USP48-203ENST00000374732 HBDP02042 147 aa5.93□□□□□ -1.46
USP48-203ENST00000374732 FUSP35637 526 aaKnown RBP eCLIP5.93□□□□□ -1.46
USP48-203ENST00000374732 Q0VFX4 171 aa5.93□□□□□ -1.46
USP48-203ENST00000374732 NKAPP1Q8N9T2 125 aa5.93□□□□□ -1.46
USP48-203ENST00000374732 NXPH4O95158 308 aa5.93□□□□□ -1.46
USP48-203ENST00000374732 FSTL3O95633 263 aa5.93□□□□□ -1.46
USP48-203ENST00000374732 UBE2D3P61077 147 aa5.93□□□□□ -1.46
USP48-203ENST00000374732 UBE2D2P62837 147 aa5.93□□□□□ -1.46
USP48-203ENST00000374732 KISS1Q15726 138 aa5.93□□□□□ -1.46
USP48-203ENST00000374732 CRIP3Q6Q6R5 217 aa5.93□□□□□ -1.46
USP48-203ENST00000374732 SPACA3Q8IXA5 215 aa5.93□□□□□ -1.46
USP48-203ENST00000374732 ITLN1Q8WWA0 313 aa5.93□□□□□ -1.46
USP48-203ENST00000374732 ITLN2Q8WWU7 325 aaPredicted RBP5.93□□□□□ -1.46
USP48-203ENST00000374732 NPCDR1Q9BY65 106 aa5.93□□□□□ -1.46
USP48-203ENST00000374732 LIME1Q9H400 295 aa5.93□□□□□ -1.46
USP48-203ENST00000374732 NCOR1O75376 2440 aa5.93□□□□□ -1.46
USP48-203ENST00000374732 M0R135 149 aa5.93□□□□□ -1.46
USP48-203ENST00000374732 TRIAP1O43715 76 aa5.93□□□□□ -1.46
USP48-203ENST00000374732 TOMM6Q96B49 74 aa5.93□□□□□ -1.46
USP48-203ENST00000374732 RNF185Q96GF1 192 aa5.93□□□□□ -1.46
USP48-203ENST00000374732 NABP2Q9BQ15 211 aa5.93□□□□□ -1.46
USP48-203ENST00000374732 BPESC1Q9GZL8 116 aa5.93□□□□□ -1.46
USP48-203ENST00000374732 IGKV3D-15A0A087WSY6 115 aa5.92□□□□□ -1.46
USP48-203ENST00000374732 TMEM170BQ5T4T1 132 aa5.92□□□□□ -1.46
USP48-203ENST00000374732 GPHB5Q86YW7 130 aa5.92□□□□□ -1.46
USP48-203ENST00000374732 TRGV9Q99603 122 aa5.92□□□□□ -1.46
USP48-203ENST00000374732 MAP6D1Q9H9H5 199 aa5.92□□□□□ -1.46
USP48-203ENST00000374732 IQCF6A8MYZ5 107 aa5.92□□□□□ -1.46
USP48-203ENST00000374732 K7EQD1 137 aa5.92□□□□□ -1.46
USP48-203ENST00000374732 IGKV1-16P04430 117 aa5.92□□□□□ -1.46
USP48-203ENST00000374732 PLA2G2AP14555 144 aa5.92□□□□□ -1.46
USP48-203ENST00000374732 RPS18P62269 152 aaKnown RBP5.92□□□□□ -1.46
USP48-203ENST00000374732 PHF5AQ7RTV0 110 aaKnown RBP5.92□□□□□ -1.46
USP48-203ENST00000374732 GVQW1Q8N7I0 195 aa5.92□□□□□ -1.46
USP48-203ENST00000374732 ZNF714Q96N38 554 aa5.92□□□□□ -1.46
USP48-203ENST00000374732 TRBV25-1A0A075B6N4 114 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms