RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 CD24P25063 80 aa5.29□□□□□ -1.56
CHD6-203ENST00000373233 PSMB8P28062 276 aa5.29□□□□□ -1.56
CHD6-203ENST00000373233 KRTAP27-1Q3LI81 207 aa5.29□□□□□ -1.56
CHD6-203ENST00000373233 IGHV3-49A0A0A0MS15 119 aa5.29□□□□□ -1.56
CHD6-203ENST00000373233 TEX49A0A1B0GTD5 131 aa5.29□□□□□ -1.56
CHD6-203ENST00000373233 J3QQQ9 107 aa5.29□□□□□ -1.56
CHD6-203ENST00000373233 ZNF726P1Q15940 193 aa5.29□□□□□ -1.56
CHD6-203ENST00000373233 DPH3Q96FX2 82 aa5.29□□□□□ -1.56
CHD6-203ENST00000373233 DCTN5Q9BTE1 182 aa5.29□□□□□ -1.56
CHD6-203ENST00000373233 CD7P09564 240 aa5.29□□□□□ -1.56
CHD6-203ENST00000373233 CD69Q07108 199 aa5.29□□□□□ -1.56
CHD6-203ENST00000373233 FAM201AQ5SY85 155 aa5.29□□□□□ -1.56
CHD6-203ENST00000373233 FAM231DQ6ZW35 169 aa5.29□□□□□ -1.56
CHD6-203ENST00000373233 ICOSQ9Y6W8 199 aa5.29□□□□□ -1.56
CHD6-203ENST00000373233 TFF1P04155 84 aa5.28□□□□□ -1.56
CHD6-203ENST00000373233 RSPO1Q2MKA7 263 aaPredicted RBP5.28□□□□□ -1.56
CHD6-203ENST00000373233 MPLKIPQ8TAP9 179 aa5.28□□□□□ -1.56
CHD6-203ENST00000373233 Q8TAT8 98 aa5.28□□□□□ -1.56
CHD6-203ENST00000373233 NEU4Q8WWR8 484 aaPredicted RBP5.28□□□□□ -1.56
CHD6-203ENST00000373233 TMEM141Q96I45 108 aa5.28□□□□□ -1.56
CHD6-203ENST00000373233 K7EMI3 77 aa5.28□□□□□ -1.56
CHD6-203ENST00000373233 PRCDQ00LT1 54 aa5.28□□□□□ -1.56
CHD6-203ENST00000373233 TRPT1Q86TN4 253 aaKnown RBP5.28□□□□□ -1.56
CHD6-203ENST00000373233 IGHV1-46P01743 117 aa5.28□□□□□ -1.56
CHD6-203ENST00000373233 PVRIGQ6DKI7 326 aa5.28□□□□□ -1.56
CHD6-203ENST00000373233 ZNRF1Q8ND25 227 aa5.28□□□□□ -1.56
CHD6-203ENST00000373233 PYGO2Q9BRQ0 406 aa5.28□□□□□ -1.56
CHD6-203ENST00000373233 ZNF581Q9P0T4 197 aa5.28□□□□□ -1.56
CHD6-203ENST00000373233 TRBV19A0A075B6N1 114 aa5.28□□□□□ -1.56
CHD6-203ENST00000373233 SPATA12Q7Z6I5 190 aa5.28□□□□□ -1.56
CHD6-203ENST00000373233 TP73-AS1Q9UF72 201 aa5.28□□□□□ -1.56
CHD6-203ENST00000373233 IGHV3OR16-8A0A075B7F1 116 aa5.28□□□□□ -1.56
CHD6-203ENST00000373233 F8WEM9 126 aa5.28□□□□□ -1.56
CHD6-203ENST00000373233 LINC01620Q4KN68 170 aa5.28□□□□□ -1.56
CHD6-203ENST00000373233 MRPL51Q4U2R6 128 aaKnown RBP5.28□□□□□ -1.56
CHD6-203ENST00000373233 TP53TG1Q9Y2A0 90 aa5.28□□□□□ -1.56
CHD6-203ENST00000373233 S4R3C0 116 aa5.28□□□□□ -1.56
CHD6-203ENST00000373233 K7EM74 188 aa5.28□□□□□ -1.56
CHD6-203ENST00000373233 LINC00173Q6ZV60 143 aa5.28□□□□□ -1.56
CHD6-203ENST00000373233 MUSTN1Q8IVN3 82 aa5.28□□□□□ -1.56
CHD6-203ENST00000373233 C8orf31Q8N9H6 132 aa5.28□□□□□ -1.56
CHD6-203ENST00000373233 CCL19Q99731 98 aa5.28□□□□□ -1.56
CHD6-203ENST00000373233 RAI1Q7Z5J4 1906 aaPredicted RBP5.28□□□□□ -1.56
CHD6-203ENST00000373233 C17orf100A8MU93 164 aa5.28□□□□□ -1.56
CHD6-203ENST00000373233 TM4SF5O14894 197 aa5.28□□□□□ -1.56
CHD6-203ENST00000373233 IGLV3-1P01715 115 aa5.28□□□□□ -1.56
CHD6-203ENST00000373233 C14orf178Q8N769 122 aaPredicted RBP5.28□□□□□ -1.56
CHD6-203ENST00000373233 FAM216BQ8N7L0 139 aa5.28□□□□□ -1.56
CHD6-203ENST00000373233 C21orf62Q9NYP8 219 aa5.28□□□□□ -1.56
CHD6-203ENST00000373233 NDUFA12Q9UI09 145 aa5.28□□□□□ -1.56
CHD6-203ENST00000373233 COX6B1P14854 86 aa5.27□□□□□ -1.57
CHD6-203ENST00000373233 Q6P435 159 aa5.27□□□□□ -1.57
CHD6-203ENST00000373233 SHISA2Q6UWI4 295 aa5.27□□□□□ -1.57
CHD6-203ENST00000373233 DPH3P1Q9H4G8 78 aa5.27□□□□□ -1.57
CHD6-203ENST00000373233 F8VRH5 84 aa5.27□□□□□ -1.57
CHD6-203ENST00000373233 BAALC-AS2P0C853 105 aa5.27□□□□□ -1.57
CHD6-203ENST00000373233 ZNF747Q9BV97 191 aa5.27□□□□□ -1.57
CHD6-203ENST00000373233 IGHV3-35A0A0C4DH35 117 aa5.27□□□□□ -1.57
CHD6-203ENST00000373233 COLCA1Q6ZS62 124 aa5.27□□□□□ -1.57
CHD6-203ENST00000373233 LY6G5BQ8NDX9 201 aa5.27□□□□□ -1.57
CHD6-203ENST00000373233 Q71RC1 249 aaPredicted RBP5.27□□□□□ -1.57
CHD6-203ENST00000373233 POLQO75417 2590 aa5.27□□□□□ -1.57
CHD6-203ENST00000373233 MALP21145 153 aa5.27□□□□□ -1.57
CHD6-203ENST00000373233 TRAV25A0A0B4J276 109 aa5.27□□□□□ -1.57
CHD6-203ENST00000373233 IGHV3-66A0A0C4DH42 116 aa5.27□□□□□ -1.57
CHD6-203ENST00000373233 K7EN84 100 aa5.27□□□□□ -1.57
CHD6-203ENST00000373233 TRGV9Q99603 122 aa5.27□□□□□ -1.57
CHD6-203ENST00000373233 PRSS46E5RG02 174 aa5.27□□□□□ -1.57
CHD6-203ENST00000373233 NPPCP23582 126 aa5.27□□□□□ -1.57
CHD6-203ENST00000373233 VSIG2Q96IQ7 327 aa5.27□□□□□ -1.57
CHD6-203ENST00000373233 A0A087WX48 190 aa5.27□□□□□ -1.57
CHD6-203ENST00000373233 C1orf147Q96MC9 270 aaPredicted RBP5.27□□□□□ -1.57
CHD6-203ENST00000373233 FANCD2OSQ96PS1 177 aa5.27□□□□□ -1.57
CHD6-203ENST00000373233 ATP5EP56381 51 aaPredicted RBP5.26□□□□□ -1.57
CHD6-203ENST00000373233 C2orf66Q6UXQ4 117 aa5.26□□□□□ -1.57
CHD6-203ENST00000373233 PRIMA1Q86XR5 153 aa5.26□□□□□ -1.57
CHD6-203ENST00000373233 TRAV12-2A0A075B6T6 113 aa5.26□□□□□ -1.57
CHD6-203ENST00000373233 VCYO14598 125 aa5.26□□□□□ -1.57
CHD6-203ENST00000373233 TRGV11A0A075B6L2 103 aa5.26□□□□□ -1.57
CHD6-203ENST00000373233 IGHV3OR16-12A0A075B7B8 117 aa5.26□□□□□ -1.57
CHD6-203ENST00000373233 LTAP01374 205 aa5.26□□□□□ -1.57
CHD6-203ENST00000373233 C8orf46Q8TAG6 207 aa5.26□□□□□ -1.57
CHD6-203ENST00000373233 CLPSL1A2RUU4 121 aa5.26□□□□□ -1.57
CHD6-203ENST00000373233 CRYGCP07315 174 aa5.26□□□□□ -1.57
CHD6-203ENST00000373233 C11orf52Q96A22 123 aa5.26□□□□□ -1.57
CHD6-203ENST00000373233 PCNTO95613 3336 aa5.26□□□□□ -1.57
CHD6-203ENST00000373233 THBDP07204 575 aa5.26□□□□□ -1.57
CHD6-203ENST00000373233 C15orf62A8K5M9 175 aa5.25□□□□□ -1.57
CHD6-203ENST00000373233 OOSP1A8MZH6 123 aa5.25□□□□□ -1.57
CHD6-203ENST00000373233 NDPQ00604 133 aa5.25□□□□□ -1.57
CHD6-203ENST00000373233 DSCR8Q96T75 97 aa5.25□□□□□ -1.57
CHD6-203ENST00000373233 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.25□□□□□ -1.57
CHD6-203ENST00000373233 SLC25A29Q8N8R3 303 aa5.25□□□□□ -1.57
CHD6-203ENST00000373233 DEFB104AQ8WTQ1 72 aa5.25□□□□□ -1.57
CHD6-203ENST00000373233 ZNF292O60281 2723 aa5.25□□□□□ -1.57
CHD6-203ENST00000373233 SRRM5B3KS81 715 aa5.25□□□□□ -1.57
CHD6-203ENST00000373233 HS3ST6Q96QI5 342 aa5.25□□□□□ -1.57
CHD6-203ENST00000373233 LINC00312Q9Y6C7 94 aa5.25□□□□□ -1.57
CHD6-203ENST00000373233 IGHV3-23P01764 117 aa5.25□□□□□ -1.57
CHD6-203ENST00000373233 HOXD3P31249 432 aaPredicted RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 198.8 ms