RNA–Protein interactions for RNA: ENST00000372972.6

CSTF2-201, Transcript of cleavage stimulation factor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF2, Length 1,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-201ENST00000372972 SMKR1H3BMG3 65 aa10.1□□□□□ -0.79
CSTF2-201ENST00000372972 J3KRW8 73 aa10.1□□□□□ -0.79
CSTF2-201ENST00000372972 SNAI2O43623 268 aa10.1□□□□□ -0.79
CSTF2-201ENST00000372972 CACNG7P62955 275 aa10.1□□□□□ -0.79
CSTF2-201ENST00000372972 SMIM15Q7Z3B0 74 aa10.1□□□□□ -0.79
CSTF2-201ENST00000372972 SPATA12Q7Z6I5 190 aa10.1□□□□□ -0.79
CSTF2-201ENST00000372972 TEX29Q8N6K0 151 aa10.1□□□□□ -0.79
CSTF2-201ENST00000372972 KLHDC1Q8N7A1 406 aa10.1□□□□□ -0.79
CSTF2-201ENST00000372972 DUX5Q96PT3 197 aa10.1□□□□□ -0.79
CSTF2-201ENST00000372972 HECTD1Q9ULT8 2610 aa10.1□□□□□ -0.79
CSTF2-201ENST00000372972 TLN2Q9Y4G6 2542 aa10.09□□□□□ -0.79
CSTF2-201ENST00000372972 TRAV9-2A0A087WT02 112 aa10.09□□□□□ -0.79
CSTF2-201ENST00000372972 C20orf202A1L168 122 aa10.09□□□□□ -0.79
CSTF2-201ENST00000372972 LGALS9O00182 355 aa10.09□□□□□ -0.79
CSTF2-201ENST00000372972 TCF21O43680 179 aa10.09□□□□□ -0.79
CSTF2-201ENST00000372972 NPYP01303 97 aa10.09□□□□□ -0.79
CSTF2-201ENST00000372972 PET117Q6UWS5 81 aa10.09□□□□□ -0.79
CSTF2-201ENST00000372972 APRG1Q8IVJ8 170 aa10.09□□□□□ -0.79
CSTF2-201ENST00000372972 Q8N2B8 174 aa10.09□□□□□ -0.79
CSTF2-201ENST00000372972 LAMTOR2Q9Y2Q5 125 aa10.09□□□□□ -0.79
CSTF2-201ENST00000372972 CD5LO43866 347 aa10.08□□□□□ -0.8
CSTF2-201ENST00000372972 NCR2O95944 276 aa10.08□□□□□ -0.8
CSTF2-201ENST00000372972 WFDC3Q8IUB2 231 aa10.08□□□□□ -0.8
CSTF2-201ENST00000372972 C2orf88Q9BSF0 95 aa10.08□□□□□ -0.8
CSTF2-201ENST00000372972 MS4A6AQ9H2W1 248 aa10.08□□□□□ -0.8
CSTF2-201ENST00000372972 YAE1D1Q9NRH1 226 aa10.08□□□□□ -0.8
CSTF2-201ENST00000372972 FASNP49327 2511 aaKnown RBP10.08□□□□□ -0.8
CSTF2-201ENST00000372972 IGHV4OR15-8A0A075B7B6 117 aa10.08□□□□□ -0.8
CSTF2-201ENST00000372972 A0A087WW49 117 aa10.08□□□□□ -0.8
CSTF2-201ENST00000372972 M0R143 59 aa10.08□□□□□ -0.8
CSTF2-201ENST00000372972 RNASE4P34096 147 aaKnown RBP10.08□□□□□ -0.8
CSTF2-201ENST00000372972 SYNJ2BPP57105 145 aa10.08□□□□□ -0.8
CSTF2-201ENST00000372972 SPANXN1Q5VSR9 72 aa10.08□□□□□ -0.8
CSTF2-201ENST00000372972 ZNF747Q9BV97 191 aa10.08□□□□□ -0.8
CSTF2-201ENST00000372972 TIMM8BQ9Y5J9 83 aaPredicted RBP10.08□□□□□ -0.8
CSTF2-201ENST00000372972 ZNF469Q96JG9 3925 aaPredicted RBP10.08□□□□□ -0.8
CSTF2-201ENST00000372972 OR4C46A6NHA9 309 aa10.07□□□□□ -0.8
CSTF2-201ENST00000372972 IGLC3P0DOY3 106 aa10.07□□□□□ -0.8
CSTF2-201ENST00000372972 EVI2AP22794 236 aa10.07□□□□□ -0.8
CSTF2-201ENST00000372972 HOXD3P31249 432 aaPredicted RBP10.07□□□□□ -0.8
CSTF2-201ENST00000372972 MAJINQ3KP22 176 aa10.07□□□□□ -0.8
CSTF2-201ENST00000372972 MAP1LC3AQ9H492 121 aa10.07□□□□□ -0.8
CSTF2-201ENST00000372972 UQCR10Q9UDW1 63 aa10.07□□□□□ -0.8
CSTF2-201ENST00000372972 H3BVH4 76 aa10.06□□□□□ -0.8
CSTF2-201ENST00000372972 MRPL52Q86TS9 123 aaKnown RBP10.06□□□□□ -0.8
CSTF2-201ENST00000372972 LURAP1LQ8IV03 231 aa10.06□□□□□ -0.8
CSTF2-201ENST00000372972 SNHG12Q9BXW3 62 aa10.06□□□□□ -0.8
CSTF2-201ENST00000372972 A0A096LNJ9 63 aa10.06□□□□□ -0.8
CSTF2-201ENST00000372972 TNFRSF6BO95407 300 aa10.06□□□□□ -0.8
CSTF2-201ENST00000372972 ANXA2RQ3ZCQ2 193 aa10.06□□□□□ -0.8
CSTF2-201ENST00000372972 TMEM86BQ8N661 226 aa10.06□□□□□ -0.8
CSTF2-201ENST00000372972 EREGO14944 169 aa10.05□□□□□ -0.8
CSTF2-201ENST00000372972 GAS8-AS1O95177 125 aa10.05□□□□□ -0.8
CSTF2-201ENST00000372972 S100A4P26447 101 aaKnown RBP10.05□□□□□ -0.8
CSTF2-201ENST00000372972 ASIPP42127 132 aa10.05□□□□□ -0.8
CSTF2-201ENST00000372972 TFPI2P48307 235 aa10.05□□□□□ -0.8
CSTF2-201ENST00000372972 SNRPD3P62318 126 aaKnown RBP10.05□□□□□ -0.8
CSTF2-201ENST00000372972 SONP18583 2426 aaKnown RBP10.05□□□□□ -0.8
CSTF2-201ENST00000372972 KLLNB2CW77 178 aa10.05□□□□□ -0.8
CSTF2-201ENST00000372972 K7EQG2 157 aa10.05□□□□□ -0.8
CSTF2-201ENST00000372972 HBDP02042 147 aa10.05□□□□□ -0.8
CSTF2-201ENST00000372972 IGLL1P15814 213 aa10.05□□□□□ -0.8
CSTF2-201ENST00000372972 KIR3DS1Q14943 382 aa10.05□□□□□ -0.8
CSTF2-201ENST00000372972 NXT2Q9NPJ8 142 aaKnown RBP10.05□□□□□ -0.8
CSTF2-201ENST00000372972 ACANP16112 2415 aa10.04□□□□□ -0.8
CSTF2-201ENST00000372972 LINC01546A6NGU7 62 aa10.04□□□□□ -0.8
CSTF2-201ENST00000372972 H0Y8G0 127 aa10.04□□□□□ -0.8
CSTF2-201ENST00000372972 ZNF688P0C7X2 276 aa10.04□□□□□ -0.8
CSTF2-201ENST00000372972 MED14OSP0DP75 135 aa10.04□□□□□ -0.8
CSTF2-201ENST00000372972 PSMG4Q5JS54 123 aa10.04□□□□□ -0.8
CSTF2-201ENST00000372972 LINC01545Q5VT33 79 aa10.04□□□□□ -0.8
CSTF2-201ENST00000372972 GATA1P15976 413 aaPredicted RBP10.03□□□□□ -0.8
CSTF2-201ENST00000372972 OR2K2Q8NGT1 345 aa10.03□□□□□ -0.8
CSTF2-201ENST00000372972 PHLDA3Q9Y5J5 127 aa10.03□□□□□ -0.8
CSTF2-201ENST00000372972 GNRH2O43555 120 aa10.03□□□□□ -0.8
CSTF2-201ENST00000372972 Q6ZN92 141 aa10.03□□□□□ -0.8
CSTF2-201ENST00000372972 SCRT2Q9NQ03 307 aa10.03□□□□□ -0.8
CSTF2-201ENST00000372972 A0A0J9YX75 114 aa10.02□□□□□ -0.81
CSTF2-201ENST00000372972 A0A1B0GV90 55 aa10.02□□□□□ -0.81
CSTF2-201ENST00000372972 DNAJC9-AS1A6NH13 148 aa10.02□□□□□ -0.81
CSTF2-201ENST00000372972 PRSS47A8MTI9 375 aa10.02□□□□□ -0.81
CSTF2-201ENST00000372972 M0R381 172 aa10.02□□□□□ -0.81
CSTF2-201ENST00000372972 FXYD7P58549 80 aa10.02□□□□□ -0.81
CSTF2-201ENST00000372972 ODF3Q96PU9 254 aa10.02□□□□□ -0.81
CSTF2-201ENST00000372972 MCRIP2Q9BUT9 160 aaKnown RBP10.02□□□□□ -0.81
CSTF2-201ENST00000372972 ST20Q9HBF5 79 aa10.02□□□□□ -0.81
CSTF2-201ENST00000372972 HSBP1L1C9JCN9 74 aa10.01□□□□□ -0.81
CSTF2-201ENST00000372972 LEPP41159 167 aa10.01□□□□□ -0.81
CSTF2-201ENST00000372972 TCTEX1D4Q5JR98 221 aa10.01□□□□□ -0.81
CSTF2-201ENST00000372972 FAM159AQ6UWV7 190 aa10.01□□□□□ -0.81
CSTF2-201ENST00000372972 C18orf65Q6ZTR6 163 aa10.01□□□□□ -0.81
CSTF2-201ENST00000372972 MRAP2Q96G30 205 aa10.01□□□□□ -0.81
CSTF2-201ENST00000372972 MYO9AB2RTY4 2548 aa10.01□□□□□ -0.81
CSTF2-201ENST00000372972 LINC01619G3V211 115 aa10.01□□□□□ -0.81
CSTF2-201ENST00000372972 RNASE3P12724 160 aaKnown RBP10.01□□□□□ -0.81
CSTF2-201ENST00000372972 HNRNPA3P51991 378 aaKnown RBP10.01□□□□□ -0.81
CSTF2-201ENST00000372972 SLURP1P55000 103 aa10.01□□□□□ -0.81
CSTF2-201ENST00000372972 DEFB125Q8N687 156 aa10.01□□□□□ -0.81
CSTF2-201ENST00000372972 Q8N8P6 123 aa10.01□□□□□ -0.81
CSTF2-201ENST00000372972 NRACQ8N912 160 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms