RNA–Protein interactions for RNA: ENST00000368686.1

CHTOP-201, Transcript of chromatin target of PRMT1, humanhuman

TSL 2 BASIC

Gene CHTOP, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-201ENST00000368686 C2orf66Q6UXQ4 117 aa13.77□□□□□ -0.21
CHTOP-201ENST00000368686 RNF5Q99942 180 aa13.77□□□□□ -0.21
CHTOP-201ENST00000368686 URB1O60287 2271 aaKnown RBP13.77□□□□□ -0.21
CHTOP-201ENST00000368686 ASCL5Q7RTU5 278 aa13.76□□□□□ -0.21
CHTOP-201ENST00000368686 VPREB3Q9UKI3 123 aa13.76□□□□□ -0.21
CHTOP-201ENST00000368686 SMAD5-AS1Q9Y6J3 95 aa13.76□□□□□ -0.21
CHTOP-201ENST00000368686 TRPT1Q86TN4 253 aaKnown RBP13.76□□□□□ -0.21
CHTOP-201ENST00000368686 MALRD1Q5VYJ5 2156 aa13.76□□□□□ -0.21
CHTOP-201ENST00000368686 ATXN8Q156A1 80 aa13.75□□□□□ -0.21
CHTOP-201ENST00000368686 LYPD2Q6UXB3 125 aa13.75□□□□□ -0.21
CHTOP-201ENST00000368686 C11orf21Q9P2W6 132 aa13.75□□□□□ -0.21
CHTOP-201ENST00000368686 S4R3C0 116 aa13.75□□□□□ -0.21
CHTOP-201ENST00000368686 Q6ZS46 218 aa13.74□□□□□ -0.21
CHTOP-201ENST00000368686 PRSS33Q8NF86 280 aa13.74□□□□□ -0.21
CHTOP-201ENST00000368686 FAM57AQ8TBR7 257 aa13.74□□□□□ -0.21
CHTOP-201ENST00000368686 IGLV1-47P01700 117 aa13.74□□□□□ -0.21
CHTOP-201ENST00000368686 IGHV3-33P01772 117 aa13.74□□□□□ -0.21
CHTOP-201ENST00000368686 ICE1Q9Y2F5 2266 aa13.73□□□□□ -0.21
CHTOP-201ENST00000368686 TRAV2A0A0B4J234 112 aa13.73□□□□□ -0.21
CHTOP-201ENST00000368686 TMEM178BH3BS89 294 aa13.73□□□□□ -0.21
CHTOP-201ENST00000368686 LINC01620Q4KN68 170 aa13.73□□□□□ -0.21
CHTOP-201ENST00000368686 MAFAQ8NHW3 353 aaPredicted RBP13.73□□□□□ -0.21
CHTOP-201ENST00000368686 C11orf86A6NJI1 115 aa13.73□□□□□ -0.21
CHTOP-201ENST00000368686 BUB1B-PAK6H3BSN5 160 aa13.73□□□□□ -0.21
CHTOP-201ENST00000368686 A0A0B4J2C4 111 aa13.72□□□□□ -0.21
CHTOP-201ENST00000368686 PRAC2D3DTV9 90 aa13.72□□□□□ -0.21
CHTOP-201ENST00000368686 C17orf100A8MU93 164 aa13.71□□□□□ -0.21
CHTOP-201ENST00000368686 H3BMM0 161 aa13.71□□□□□ -0.21
CHTOP-201ENST00000368686 LGALS9O00182 355 aa13.71□□□□□ -0.21
CHTOP-201ENST00000368686 SCGB2A1O75556 95 aa13.71□□□□□ -0.21
CHTOP-201ENST00000368686 UBE2WQ96B02 151 aa13.71□□□□□ -0.21
CHTOP-201ENST00000368686 IGLV4-69A0A075B6H9 119 aa13.71□□□□□ -0.21
CHTOP-201ENST00000368686 TRBV10-2A0A0K0K1G8 114 aa13.71□□□□□ -0.21
CHTOP-201ENST00000368686 TEX49A0A1B0GTD5 131 aa13.71□□□□□ -0.21
CHTOP-201ENST00000368686 F8W735 103 aaPredicted RBP13.71□□□□□ -0.21
CHTOP-201ENST00000368686 TMEM263Q8WUH6 116 aaKnown RBP13.71□□□□□ -0.21
CHTOP-201ENST00000368686 CEP290O15078 2479 aa13.71□□□□□ -0.22
CHTOP-201ENST00000368686 IGLV11-55A0A075B6I3 123 aa13.7□□□□□ -0.22
CHTOP-201ENST00000368686 TIMM23O14925 209 aa13.7□□□□□ -0.22
CHTOP-201ENST00000368686 CRYGDP07320 174 aa13.7□□□□□ -0.22
CHTOP-201ENST00000368686 C21orf62Q9NYP8 219 aa13.7□□□□□ -0.22
CHTOP-201ENST00000368686 A0A1W2PNU3 283 aaPredicted RBP13.7□□□□□ -0.22
CHTOP-201ENST00000368686 A4D1N5 150 aa13.7□□□□□ -0.22
CHTOP-201ENST00000368686 ATP1A1-AS1Q5TC04 95 aa13.7□□□□□ -0.22
CHTOP-201ENST00000368686 C1orf210Q8IVY1 113 aa13.7□□□□□ -0.22
CHTOP-201ENST00000368686 NUP37Q8NFH4 326 aa13.7□□□□□ -0.22
CHTOP-201ENST00000368686 ZNF318Q5VUA4 2279 aa13.69□□□□□ -0.22
CHTOP-201ENST00000368686 FOXC1Q12948 553 aa13.69□□□□□ -0.22
CHTOP-201ENST00000368686 KAAG1Q9UBP8 84 aa13.69□□□□□ -0.22
CHTOP-201ENST00000368686 IGHV1-69DA0A0B4J2H0 117 aa13.69□□□□□ -0.22
CHTOP-201ENST00000368686 MBD3L4A6NDZ8 208 aaPredicted RBP13.69□□□□□ -0.22
CHTOP-201ENST00000368686 MBD3L3A6NE82 208 aaPredicted RBP13.69□□□□□ -0.22
CHTOP-201ENST00000368686 MBD3L5A6NJ08 208 aaPredicted RBP13.69□□□□□ -0.22
CHTOP-201ENST00000368686 MBD3L2Q8NHZ7 208 aaPredicted RBP13.69□□□□□ -0.22
CHTOP-201ENST00000368686 IGFBPL1Q8WX77 278 aa13.69□□□□□ -0.22
CHTOP-201ENST00000368686 FANCD2OSQ96PS1 177 aa13.69□□□□□ -0.22
CHTOP-201ENST00000368686 PPDPFQ9H3Y8 114 aa13.69□□□□□ -0.22
CHTOP-201ENST00000368686 M0R381 172 aa13.68□□□□□ -0.22
CHTOP-201ENST00000368686 TSPEAR-AS2P59090 65 aa13.68□□□□□ -0.22
CHTOP-201ENST00000368686 CCL17Q92583 94 aa13.68□□□□□ -0.22
CHTOP-201ENST00000368686 LINC01587Q99440 93 aa13.68□□□□□ -0.22
CHTOP-201ENST00000368686 AGPAT4-IT1Q9H0P7 198 aa13.68□□□□□ -0.22
CHTOP-201ENST00000368686 PLCE1Q9P212 2302 aa13.68□□□□□ -0.22
CHTOP-201ENST00000368686 FAM240AA0A1B0GVK7 77 aa13.67□□□□□ -0.22
CHTOP-201ENST00000368686 SEM1Q6ZVN7 128 aa13.67□□□□□ -0.22
CHTOP-201ENST00000368686 DUSP14O95147 198 aaKnown RBP13.67□□□□□ -0.22
CHTOP-201ENST00000368686 RPL39LQ96EH5 51 aaKnown RBP13.67□□□□□ -0.22
CHTOP-201ENST00000368686 DPH3P1Q9H4G8 78 aa13.67□□□□□ -0.22
CHTOP-201ENST00000368686 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.66□□□□□ -0.22
CHTOP-201ENST00000368686 PPP1R17O96001 155 aa13.66□□□□□ -0.22
CHTOP-201ENST00000368686 ID1P41134 155 aa13.66□□□□□ -0.22
CHTOP-201ENST00000368686 LY6DQ14210 128 aa13.66□□□□□ -0.22
CHTOP-201ENST00000368686 PMVKQ15126 192 aa13.66□□□□□ -0.22
CHTOP-201ENST00000368686 RNF182Q8N6D2 247 aa13.66□□□□□ -0.22
CHTOP-201ENST00000368686 AMELXQ99217 191 aa13.66□□□□□ -0.22
CHTOP-201ENST00000368686 TRBV7-7A0A0K0K1E9 115 aa13.66□□□□□ -0.22
CHTOP-201ENST00000368686 RNF223E7ERA6 249 aa13.66□□□□□ -0.22
CHTOP-201ENST00000368686 NBR2O15453 112 aa13.66□□□□□ -0.22
CHTOP-201ENST00000368686 EIF4EBP3O60516 100 aaPredicted RBP13.66□□□□□ -0.22
CHTOP-201ENST00000368686 LGALS3P17931 250 aaKnown RBP13.66□□□□□ -0.22
CHTOP-201ENST00000368686 TCF15Q12870 199 aa13.66□□□□□ -0.22
CHTOP-201ENST00000368686 Q1RN00 199 aa13.66□□□□□ -0.22
CHTOP-201ENST00000368686 H7C2G1 150 aa13.65□□□□□ -0.22
CHTOP-201ENST00000368686 J3QQQ9 107 aa13.65□□□□□ -0.22
CHTOP-201ENST00000368686 DLX1P56177 255 aa13.65□□□□□ -0.22
CHTOP-201ENST00000368686 NRGNQ92686 78 aa13.65□□□□□ -0.22
CHTOP-201ENST00000368686 MSRB2Q9Y3D2 182 aa13.65□□□□□ -0.22
CHTOP-201ENST00000368686 IGHV4-39P01824 125 aa13.65□□□□□ -0.22
CHTOP-201ENST00000368686 CHCHD5Q9BSY4 110 aa13.65□□□□□ -0.22
CHTOP-201ENST00000368686 TRBV30A0A0K0K1B3 111 aa13.64□□□□□ -0.23
CHTOP-201ENST00000368686 TMEM170BQ5T4T1 132 aa13.64□□□□□ -0.23
CHTOP-201ENST00000368686 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.64□□□□□ -0.23
CHTOP-201ENST00000368686 TSHBP01222 138 aa13.64□□□□□ -0.23
CHTOP-201ENST00000368686 ELANEP08246 267 aa13.63□□□□□ -0.23
CHTOP-201ENST00000368686 CTSGP08311 255 aa13.63□□□□□ -0.23
CHTOP-201ENST00000368686 ZNF883P0CG24 379 aa13.63□□□□□ -0.23
CHTOP-201ENST00000368686 EMP1P54849 157 aa13.63□□□□□ -0.23
CHTOP-201ENST00000368686 C2orf82Q6UX34 121 aa13.63□□□□□ -0.23
CHTOP-201ENST00000368686 TMEM141Q96I45 108 aa13.63□□□□□ -0.23
CHTOP-201ENST00000368686 DNAJC30Q96LL9 226 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms