RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 FAM159AQ6UWV7 190 aa6.55□□□□□ -1.36
TPM3-213ENST00000368545 OR11H1Q8NG94 326 aa6.55□□□□□ -1.36
TPM3-213ENST00000368545 FAM210BQ96KR6 192 aa6.55□□□□□ -1.36
TPM3-213ENST00000368545 C11orf21Q9P2W6 132 aa6.55□□□□□ -1.36
TPM3-213ENST00000368545 MLXQ9UH92 298 aa6.55□□□□□ -1.36
TPM3-213ENST00000368545 TSSC4Q9Y5U2 329 aaPredicted RBP6.55□□□□□ -1.36
TPM3-213ENST00000368545 IGKV2-40A0A087WW87 121 aaPredicted RBP6.55□□□□□ -1.36
TPM3-213ENST00000368545 TRAV8-2A0A0B4J237 113 aa6.55□□□□□ -1.36
TPM3-213ENST00000368545 C1orf196B1AJZ1 125 aa6.55□□□□□ -1.36
TPM3-213ENST00000368545 SOCS3O14543 225 aa6.55□□□□□ -1.36
TPM3-213ENST00000368545 PAX4O43316 350 aa6.55□□□□□ -1.36
TPM3-213ENST00000368545 GATCO43716 136 aaKnown RBP6.55□□□□□ -1.36
TPM3-213ENST00000368545 IGKV2D-40P01614 121 aaPredicted RBP6.55□□□□□ -1.36
TPM3-213ENST00000368545 CT45A10P0DMU9 189 aa6.55□□□□□ -1.36
TPM3-213ENST00000368545 IGHV4-30-4P0DP06 118 aa6.55□□□□□ -1.36
TPM3-213ENST00000368545 C10orf25Q5T742 122 aa6.55□□□□□ -1.36
TPM3-213ENST00000368545 TCF24Q7RTU0 167 aa6.55□□□□□ -1.36
TPM3-213ENST00000368545 COX8CQ7Z4L0 72 aa6.55□□□□□ -1.36
TPM3-213ENST00000368545 OR1N2Q8NGR9 330 aa6.55□□□□□ -1.36
TPM3-213ENST00000368545 NDFIP1Q9BT67 221 aa6.55□□□□□ -1.36
TPM3-213ENST00000368545 C19orf71A6NCJ1 209 aa6.54□□□□□ -1.36
TPM3-213ENST00000368545 C2orf70A6NJV1 201 aa6.54□□□□□ -1.36
TPM3-213ENST00000368545 P01737 135 aa6.54□□□□□ -1.36
TPM3-213ENST00000368545 HLA-DMBP28068 263 aa6.54□□□□□ -1.36
TPM3-213ENST00000368545 RPS10P46783 165 aaKnown RBP6.54□□□□□ -1.36
TPM3-213ENST00000368545 AMTP48728 403 aa6.54□□□□□ -1.36
TPM3-213ENST00000368545 DEFB136Q30KP8 78 aa6.54□□□□□ -1.36
TPM3-213ENST00000368545 RNF182Q8N6D2 247 aa6.54□□□□□ -1.36
TPM3-213ENST00000368545 OR4B1Q8NGF8 309 aa6.54□□□□□ -1.36
TPM3-213ENST00000368545 B9D2Q9BPU9 175 aa6.54□□□□□ -1.36
TPM3-213ENST00000368545 ZNF705FA8MVS1 300 aaPredicted RBP6.53□□□□□ -1.36
TPM3-213ENST00000368545 GAGE7O76087 117 aa6.53□□□□□ -1.36
TPM3-213ENST00000368545 TYMSP04818 313 aa6.53□□□□□ -1.36
TPM3-213ENST00000368545 GAGE12FP0CL80 117 aa6.53□□□□□ -1.36
TPM3-213ENST00000368545 GAGE12GP0CL81 117 aa6.53□□□□□ -1.36
TPM3-213ENST00000368545 GAGE12IP0CL82 117 aa6.53□□□□□ -1.36
TPM3-213ENST00000368545 CBLN1P23435 193 aa6.53□□□□□ -1.36
TPM3-213ENST00000368545 ID1P41134 155 aa6.53□□□□□ -1.36
TPM3-213ENST00000368545 RAB5BP61020 215 aa6.53□□□□□ -1.36
TPM3-213ENST00000368545 GAGE1Q13065 139 aa6.53□□□□□ -1.36
TPM3-213ENST00000368545 GAGE4Q13068 117 aa6.53□□□□□ -1.36
TPM3-213ENST00000368545 C18orf65Q6ZTR6 163 aa6.53□□□□□ -1.36
TPM3-213ENST00000368545 ZNF738Q8NE65 137 aa6.53□□□□□ -1.36
TPM3-213ENST00000368545 OR9G4Q8NGQ1 327 aa6.53□□□□□ -1.36
TPM3-213ENST00000368545 RPP21Q9H633 154 aaKnown RBP6.53□□□□□ -1.36
TPM3-213ENST00000368545 OVOL1O14753 267 aa6.53□□□□□ -1.36
TPM3-213ENST00000368545 CD28P10747 220 aa6.53□□□□□ -1.36
TPM3-213ENST00000368545 TMEM78Q5T7P6 136 aa6.53□□□□□ -1.36
TPM3-213ENST00000368545 ZC2HC1AQ96GY0 325 aa6.53□□□□□ -1.36
TPM3-213ENST00000368545 SMIM27A0A1W2PRY6 76 aa6.52□□□□□ -1.37
TPM3-213ENST00000368545 A8MWL6 223 aa6.52□□□□□ -1.37
TPM3-213ENST00000368545 PAFAH1B2P68402 229 aa6.52□□□□□ -1.37
TPM3-213ENST00000368545 C9orf47Q6ZRZ4 202 aa6.52□□□□□ -1.37
TPM3-213ENST00000368545 DCANP1Q8TF63 244 aa6.52□□□□□ -1.37
TPM3-213ENST00000368545 TSKUQ8WUA8 353 aa6.52□□□□□ -1.37
TPM3-213ENST00000368545 VGLL1Q99990 258 aa6.52□□□□□ -1.37
TPM3-213ENST00000368545 LENEPQ9Y5L5 61 aa6.52□□□□□ -1.37
TPM3-213ENST00000368545 FAM231BA6NCW3 169 aa6.52□□□□□ -1.37
TPM3-213ENST00000368545 ZNF138P52744 262 aa6.52□□□□□ -1.37
TPM3-213ENST00000368545 SNRPD3P62318 126 aaKnown RBP6.52□□□□□ -1.37
TPM3-213ENST00000368545 COX19Q49B96 90 aa6.52□□□□□ -1.37
TPM3-213ENST00000368545 OR10J6PQ8NGY7 276 aa6.52□□□□□ -1.37
TPM3-213ENST00000368545 GFRA4Q9GZZ7 299 aa6.52□□□□□ -1.37
TPM3-213ENST00000368545 CSTL1Q9H114 145 aa6.52□□□□□ -1.37
TPM3-213ENST00000368545 MS4A6AQ9H2W1 248 aa6.52□□□□□ -1.37
TPM3-213ENST00000368545 IGKV3-7A0A075B6H7 116 aa6.51□□□□□ -1.37
TPM3-213ENST00000368545 TRAV2A0A0B4J234 112 aa6.51□□□□□ -1.37
TPM3-213ENST00000368545 XKRY2A2RUG3 117 aa6.51□□□□□ -1.37
TPM3-213ENST00000368545 PRAC2D3DTV9 90 aa6.51□□□□□ -1.37
TPM3-213ENST00000368545 FAM162BQ5T6X4 162 aa6.51□□□□□ -1.37
TPM3-213ENST00000368545 LINC00322Q6ZN03 302 aaPredicted RBP6.51□□□□□ -1.37
TPM3-213ENST00000368545 Q8TAT8 98 aa6.51□□□□□ -1.37
TPM3-213ENST00000368545 DLX4Q92988 240 aaPredicted RBP6.51□□□□□ -1.37
TPM3-213ENST00000368545 LINC00477Q96M19 166 aa6.51□□□□□ -1.37
TPM3-213ENST00000368545 NAT8BQ9UHF3 227 aa6.51□□□□□ -1.37
TPM3-213ENST00000368545 TRBV7-9A0A0J9YWB2 115 aa6.5□□□□□ -1.37
TPM3-213ENST00000368545 IZUMO1RA6ND01 250 aa6.5□□□□□ -1.37
TPM3-213ENST00000368545 ERCC8Q13216 396 aa6.5□□□□□ -1.37
TPM3-213ENST00000368545 VCX2Q9H322 139 aa6.5□□□□□ -1.37
TPM3-213ENST00000368545 SAV1Q9H4B6 383 aaPredicted RBP6.5□□□□□ -1.37
TPM3-213ENST00000368545 LINC00587B1AMM8 73 aa6.5□□□□□ -1.37
TPM3-213ENST00000368545 K7EQG2 157 aa6.5□□□□□ -1.37
TPM3-213ENST00000368545 Q6AWC8 147 aa6.5□□□□□ -1.37
TPM3-213ENST00000368545 RASL11AQ6T310 242 aa6.5□□□□□ -1.37
TPM3-213ENST00000368545 DYNLRB2Q8TF09 96 aa6.5□□□□□ -1.37
TPM3-213ENST00000368545 DUX3Q96PT4 197 aa6.5□□□□□ -1.37
TPM3-213ENST00000368545 AGPAT4-IT1Q9H0P7 198 aa6.5□□□□□ -1.37
TPM3-213ENST00000368545 SIGLEC8Q9NYZ4 499 aa6.5□□□□□ -1.37
TPM3-213ENST00000368545 WNK1Q9H4A3 2382 aa6.5□□□□□ -1.37
TPM3-213ENST00000368545 HIGD1CA8MV81 97 aa6.49□□□□□ -1.37
TPM3-213ENST00000368545 CA1P00915 261 aaPredicted RBP6.49□□□□□ -1.37
TPM3-213ENST00000368545 TRGC2P03986 189 aa6.49□□□□□ -1.37
TPM3-213ENST00000368545 ATP5L2Q7Z4Y8 100 aa6.49□□□□□ -1.37
TPM3-213ENST00000368545 NDUFA11Q86Y39 141 aa6.49□□□□□ -1.37
TPM3-213ENST00000368545 OR8A1Q8NGG7 326 aa6.49□□□□□ -1.37
TPM3-213ENST00000368545 OR2D3Q8NGH3 330 aa6.49□□□□□ -1.37
TPM3-213ENST00000368545 U3KQK5 164 aa6.49□□□□□ -1.37
TPM3-213ENST00000368545 FABP5P3A8MUU1 101 aa6.49□□□□□ -1.37
TPM3-213ENST00000368545 G3V4G9 280 aa6.49□□□□□ -1.37
TPM3-213ENST00000368545 CIDEAO60543 219 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 262.6 ms