RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 CMTM2Q8TAZ6 248 aa10.81□□□□□ -0.68
CKS1B-202ENST00000368436 TVP23CQ96ET8 276 aa10.81□□□□□ -0.68
CKS1B-202ENST00000368436 SMIM3Q9BZL3 60 aa10.81□□□□□ -0.68
CKS1B-202ENST00000368436 NAGKQ9UJ70 344 aa10.81□□□□□ -0.68
CKS1B-202ENST00000368436 FAT1Q14517 4588 aa10.8□□□□□ -0.68
CKS1B-202ENST00000368436 TRAV21A0A0B4J279 112 aa10.8□□□□□ -0.68
CKS1B-202ENST00000368436 TYMSP04818 313 aa10.8□□□□□ -0.68
CKS1B-202ENST00000368436 TIRAPP58753 221 aa10.8□□□□□ -0.68
CKS1B-202ENST00000368436 PQLC2Q6ZP29 291 aa10.8□□□□□ -0.68
CKS1B-202ENST00000368436 GOLT1AQ6ZVE7 132 aa10.8□□□□□ -0.68
CKS1B-202ENST00000368436 SH2D6Q7Z4S9 175 aa10.8□□□□□ -0.68
CKS1B-202ENST00000368436 C10orf126Q8N4M7 172 aa10.8□□□□□ -0.68
CKS1B-202ENST00000368436 WFDC1Q9HC57 220 aa10.8□□□□□ -0.68
CKS1B-202ENST00000368436 LOC100131303A0A0U1RQF7 123 aa10.79□□□□□ -0.68
CKS1B-202ENST00000368436 CRYGDP07320 174 aa10.79□□□□□ -0.68
CKS1B-202ENST00000368436 TREM1Q9NP99 234 aa10.79□□□□□ -0.68
CKS1B-202ENST00000368436 RPH3ALQ9UNE2 315 aa10.79□□□□□ -0.68
CKS1B-202ENST00000368436 TRAV8-1A0A0A6YYK1 113 aa10.78□□□□□ -0.68
CKS1B-202ENST00000368436 A0A1W2PPV4 95 aa10.78□□□□□ -0.68
CKS1B-202ENST00000368436 INAFM2P0DMQ5 153 aa10.78□□□□□ -0.68
CKS1B-202ENST00000368436 GATA1P15976 413 aaPredicted RBP10.78□□□□□ -0.68
CKS1B-202ENST00000368436 ACOT6Q3I5F7 207 aaPredicted RBP10.78□□□□□ -0.68
CKS1B-202ENST00000368436 KCNS1Q96KK3 526 aa10.78□□□□□ -0.68
CKS1B-202ENST00000368436 SDF2L1Q9HCN8 221 aa10.78□□□□□ -0.68
CKS1B-202ENST00000368436 F6UZH7 168 aa10.77□□□□□ -0.69
CKS1B-202ENST00000368436 SSNA1O43805 119 aa10.77□□□□□ -0.69
CKS1B-202ENST00000368436 GCSHP23434 173 aa10.77□□□□□ -0.69
CKS1B-202ENST00000368436 IGHV3-38A0A0C4DH36 116 aa10.76□□□□□ -0.69
CKS1B-202ENST00000368436 LRCOL1A6NCL2 159 aa10.76□□□□□ -0.69
CKS1B-202ENST00000368436 RAB2AP61019 212 aa10.76□□□□□ -0.69
CKS1B-202ENST00000368436 GNG5P63218 68 aa10.76□□□□□ -0.69
CKS1B-202ENST00000368436 LINC01556Q5JQF7 62 aa10.76□□□□□ -0.69
CKS1B-202ENST00000368436 Q5VSD8 79 aa10.76□□□□□ -0.69
CKS1B-202ENST00000368436 ASB13Q8WXK3 278 aa10.76□□□□□ -0.69
CKS1B-202ENST00000368436 FRZBQ92765 325 aa10.76□□□□□ -0.69
CKS1B-202ENST00000368436 CIDEAO60543 219 aa10.75□□□□□ -0.69
CKS1B-202ENST00000368436 SLC25A29Q8N8R3 303 aa10.75□□□□□ -0.69
CKS1B-202ENST00000368436 NHLRC2Q8NBF2 726 aa10.75□□□□□ -0.69
CKS1B-202ENST00000368436 OR10G9Q8NGN4 311 aa10.75□□□□□ -0.69
CKS1B-202ENST00000368436 OR10G7Q8NGN6 311 aa10.75□□□□□ -0.69
CKS1B-202ENST00000368436 SERTM2A0A1B0GWG4 89 aa10.74□□□□□ -0.69
CKS1B-202ENST00000368436 FBLL1A6NHQ2 334 aaKnown RBP10.74□□□□□ -0.69
CKS1B-202ENST00000368436 IBA57-AS1B1ANH7 110 aa10.74□□□□□ -0.69
CKS1B-202ENST00000368436 HMGB3O15347 200 aaKnown RBP10.74□□□□□ -0.69
CKS1B-202ENST00000368436 RS1O15537 224 aa10.74□□□□□ -0.69
CKS1B-202ENST00000368436 PFN1P07737 140 aaKnown RBP10.74□□□□□ -0.69
CKS1B-202ENST00000368436 PPT1P50897 306 aa10.74□□□□□ -0.69
CKS1B-202ENST00000368436 ZNF876PQ49A33 203 aa10.74□□□□□ -0.69
CKS1B-202ENST00000368436 CFAP126Q5VTH2 177 aa10.74□□□□□ -0.69
CKS1B-202ENST00000368436 SUN5Q8TC36 379 aa10.74□□□□□ -0.69
CKS1B-202ENST00000368436 C11orf21Q9P2W6 132 aa10.74□□□□□ -0.69
CKS1B-202ENST00000368436 HERC1Q15751 4861 aa10.74□□□□□ -0.69
CKS1B-202ENST00000368436 VPS13BQ7Z7G8 4022 aa10.74□□□□□ -0.69
CKS1B-202ENST00000368436 TRBV6-4A0A1B0GX49 114 aa10.73□□□□□ -0.69
CKS1B-202ENST00000368436 A6NHS1 94 aa10.73□□□□□ -0.69
CKS1B-202ENST00000368436 STAG3L2P0CL84 134 aa10.73□□□□□ -0.69
CKS1B-202ENST00000368436 STAG3L3P0CL85 134 aa10.73□□□□□ -0.69
CKS1B-202ENST00000368436 ARL14EPLP0DKL9 152 aa10.73□□□□□ -0.69
CKS1B-202ENST00000368436 ZNF80P51504 273 aaPredicted RBP10.73□□□□□ -0.69
CKS1B-202ENST00000368436 DPPA3Q6W0C5 159 aa10.73□□□□□ -0.69
CKS1B-202ENST00000368436 NTN5Q8WTR8 489 aaPredicted RBP10.73□□□□□ -0.69
CKS1B-202ENST00000368436 PTH2Q96A98 100 aa10.73□□□□□ -0.69
CKS1B-202ENST00000368436 SGK494Q96LW2 274 aa10.73□□□□□ -0.69
CKS1B-202ENST00000368436 NDFIP1Q9BT67 221 aa10.73□□□□□ -0.69
CKS1B-202ENST00000368436 TRAV8-6A0A0B4J262 113 aa10.72□□□□□ -0.69
CKS1B-202ENST00000368436 TAAR5O14804 337 aa10.72□□□□□ -0.69
CKS1B-202ENST00000368436 PSCAO43653 123 aa10.72□□□□□ -0.69
CKS1B-202ENST00000368436 TCRAP04437 139 aa10.72□□□□□ -0.69
CKS1B-202ENST00000368436 RHOHQ15669 191 aa10.72□□□□□ -0.69
CKS1B-202ENST00000368436 C5orf17Q8NAS9 161 aa10.72□□□□□ -0.69
CKS1B-202ENST00000368436 OR2G3Q8NGZ4 309 aa10.72□□□□□ -0.69
CKS1B-202ENST00000368436 C9orf85Q96MD7 179 aa10.72□□□□□ -0.69
CKS1B-202ENST00000368436 PRADC1Q9BSG0 188 aa10.72□□□□□ -0.69
CKS1B-202ENST00000368436 IGLV2-11P01706 119 aa10.71□□□□□ -0.69
CKS1B-202ENST00000368436 SMR3BP02814 79 aaPredicted RBP10.71□□□□□ -0.69
CKS1B-202ENST00000368436 CDC34P49427 236 aaPredicted RBP10.71□□□□□ -0.69
CKS1B-202ENST00000368436 DEFA1P59665 94 aa10.71□□□□□ -0.69
CKS1B-202ENST00000368436 DEFA3P59666 94 aa10.71□□□□□ -0.69
CKS1B-202ENST00000368436 TMEM70Q9BUB7 260 aa10.71□□□□□ -0.69
CKS1B-202ENST00000368436 PSG8Q9UQ74 426 aa10.71□□□□□ -0.69
CKS1B-202ENST00000368436 IGLV5-52A0A0A0MRZ9 124 aa10.7□□□□□ -0.7
CKS1B-202ENST00000368436 PGPEP1LA6NFU8 196 aa10.7□□□□□ -0.7
CKS1B-202ENST00000368436 GCGP01275 180 aa10.7□□□□□ -0.7
CKS1B-202ENST00000368436 GCHFRP30047 84 aa10.7□□□□□ -0.7
CKS1B-202ENST00000368436 OR10J3Q5JRS4 329 aa10.7□□□□□ -0.7
CKS1B-202ENST00000368436 LELP1Q5T871 98 aa10.7□□□□□ -0.7
CKS1B-202ENST00000368436 Q8N814 137 aa10.7□□□□□ -0.7
CKS1B-202ENST00000368436 RAB24Q969Q5 203 aa10.7□□□□□ -0.7
CKS1B-202ENST00000368436 PSMG3Q9BT73 122 aaPredicted RBP10.7□□□□□ -0.7
CKS1B-202ENST00000368436 DMBT1Q9UGM3 2413 aaPredicted RBP10.69□□□□□ -0.7
CKS1B-202ENST00000368436 K7EQM0 130 aa10.69□□□□□ -0.7
CKS1B-202ENST00000368436 RNASE3P12724 160 aaKnown RBP10.69□□□□□ -0.7
CKS1B-202ENST00000368436 ZNF506Q5JVG8 444 aa10.69□□□□□ -0.7
CKS1B-202ENST00000368436 TMEM75Q8N9X5 138 aa10.69□□□□□ -0.7
CKS1B-202ENST00000368436 EPDR1Q9UM22 224 aa10.69□□□□□ -0.7
CKS1B-202ENST00000368436 DNAH8Q96JB1 4490 aa10.69□□□□□ -0.7
CKS1B-202ENST00000368436 IGHV3-73A0A0B4J1V6 119 aa10.68□□□□□ -0.7
CKS1B-202ENST00000368436 FAM229AH3BQW9 127 aa10.68□□□□□ -0.7
CKS1B-202ENST00000368436 IGHV3-30P01768 117 aa10.68□□□□□ -0.7
CKS1B-202ENST00000368436 IGHV3-33P01772 117 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms