RNA–Protein interactions for RNA: ENST00000368378.7

THBS3-201, Transcript of thrombospondin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THBS3, Length 3,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-201ENST00000368378 A0A096LNJ9 63 aa6.9□□□□□ -1.3
THBS3-201ENST00000368378 F6UB75 175 aa6.9□□□□□ -1.3
THBS3-201ENST00000368378 H3BVH4 76 aa6.9□□□□□ -1.3
THBS3-201ENST00000368378 WIPF1O43516 503 aa6.9□□□□□ -1.3
THBS3-201ENST00000368378 MGPP08493 103 aa6.9□□□□□ -1.3
THBS3-201ENST00000368378 ZFP36P26651 326 aaKnown RBP6.9□□□□□ -1.3
THBS3-201ENST00000368378 SPANXN1Q5VSR9 72 aa6.9□□□□□ -1.3
THBS3-201ENST00000368378 FAM104BQ5XKR9 115 aa6.9□□□□□ -1.3
THBS3-201ENST00000368378 AMTNQ6UX39 209 aa6.9□□□□□ -1.3
THBS3-201ENST00000368378 OR2K2Q8NGT1 345 aa6.9□□□□□ -1.3
THBS3-201ENST00000368378 PRR25Q96S07 402 aa6.9□□□□□ -1.3
THBS3-201ENST00000368378 TRAV40A0A0B4J280 105 aa6.9□□□□□ -1.31
THBS3-201ENST00000368378 SEC61GP60059 68 aa6.9□□□□□ -1.31
THBS3-201ENST00000368378 HIST1H1AQ02539 215 aaPredicted RBP6.9□□□□□ -1.31
THBS3-201ENST00000368378 C2orf91Q6ZV80 131 aa6.9□□□□□ -1.31
THBS3-201ENST00000368378 TMEM158Q8WZ71 300 aa6.9□□□□□ -1.31
THBS3-201ENST00000368378 KMT2BQ9UMN6 2715 aaPredicted RBP6.89□□□□□ -1.31
THBS3-201ENST00000368378 HBDP02042 147 aa6.89□□□□□ -1.31
THBS3-201ENST00000368378 PLP1P60201 277 aa6.89□□□□□ -1.31
THBS3-201ENST00000368378 CT83Q5H943 113 aa6.89□□□□□ -1.31
THBS3-201ENST00000368378 ZC2HC1BQ5TFG8 222 aa6.89□□□□□ -1.31
THBS3-201ENST00000368378 DEFB125Q8N687 156 aa6.89□□□□□ -1.31
THBS3-201ENST00000368378 ATP6V0E1O15342 81 aa6.89□□□□□ -1.31
THBS3-201ENST00000368378 SCGB1A1P11684 91 aa6.89□□□□□ -1.31
THBS3-201ENST00000368378 S100A4P26447 101 aaKnown RBP6.89□□□□□ -1.31
THBS3-201ENST00000368378 KLRB1Q12918 225 aa6.89□□□□□ -1.31
THBS3-201ENST00000368378 HIST2H2BDQ6DRA6 164 aa6.89□□□□□ -1.31
THBS3-201ENST00000368378 PIP4P2Q8N4L2 257 aa6.89□□□□□ -1.31
THBS3-201ENST00000368378 COX8AP10176 69 aa6.88□□□□□ -1.31
THBS3-201ENST00000368378 HIST2H2BCQ6DN03 193 aa6.88□□□□□ -1.31
THBS3-201ENST00000368378 GFRA4Q9GZZ7 299 aa6.88□□□□□ -1.31
THBS3-201ENST00000368378 SPCS1Q9Y6A9 102 aa6.88□□□□□ -1.31
THBS3-201ENST00000368378 A0A0G2JLM5 398 aa6.88□□□□□ -1.31
THBS3-201ENST00000368378 PF4P02776 101 aa6.88□□□□□ -1.31
THBS3-201ENST00000368378 CTSGP08311 255 aa6.88□□□□□ -1.31
THBS3-201ENST00000368378 RPL7P18124 248 aaKnown RBP6.88□□□□□ -1.31
THBS3-201ENST00000368378 SRSF1Q07955 248 aaKnown RBP eCLIP6.88□□□□□ -1.31
THBS3-201ENST00000368378 LINC01545Q5VT33 79 aa6.88□□□□□ -1.31
THBS3-201ENST00000368378 NPIPB6E9PJ23 425 aa6.87□□□□□ -1.31
THBS3-201ENST00000368378 FXYD2P54710 66 aa6.87□□□□□ -1.31
THBS3-201ENST00000368378 TMEM14CQ9P0S9 112 aa6.87□□□□□ -1.31
THBS3-201ENST00000368378 SMAD5-AS1Q9Y6J3 95 aa6.87□□□□□ -1.31
THBS3-201ENST00000368378 NF1P21359 2839 aa6.87□□□□□ -1.31
THBS3-201ENST00000368378 ITPR2Q14571 2701 aa6.87□□□□□ -1.31
THBS3-201ENST00000368378 FN1P02751 2386 aaKnown RBP6.87□□□□□ -1.31
THBS3-201ENST00000368378 PVRIGQ6DKI7 326 aa6.87□□□□□ -1.31
THBS3-201ENST00000368378 GTF2H5Q6ZYL4 71 aa6.87□□□□□ -1.31
THBS3-201ENST00000368378 C16orf92Q96LL3 132 aa6.87□□□□□ -1.31
THBS3-201ENST00000368378 MAP1LC3AQ9H492 121 aa6.87□□□□□ -1.31
THBS3-201ENST00000368378 BAHCC1Q9P281 2608 aa6.87□□□□□ -1.31
THBS3-201ENST00000368378 DOPEY1Q5JWR5 2465 aa6.86□□□□□ -1.31
THBS3-201ENST00000368378 A0A1W2PPR1 153 aa6.86□□□□□ -1.31
THBS3-201ENST00000368378 TMEM8BA6NDV4 472 aa6.86□□□□□ -1.31
THBS3-201ENST00000368378 OR11H12B2RN74 326 aa6.86□□□□□ -1.31
THBS3-201ENST00000368378 DTX2Q86UW9 622 aa6.86□□□□□ -1.31
THBS3-201ENST00000368378 OR11H1Q8NG94 326 aa6.86□□□□□ -1.31
THBS3-201ENST00000368378 OR11H2Q8NH07 326 aa6.86□□□□□ -1.31
THBS3-201ENST00000368378 LINC00477Q96M19 166 aa6.86□□□□□ -1.31
THBS3-201ENST00000368378 PPDPFQ9H3Y8 114 aa6.86□□□□□ -1.31
THBS3-201ENST00000368378 C11orf21Q9P2W6 132 aa6.86□□□□□ -1.31
THBS3-201ENST00000368378 ACANP16112 2415 aa6.86□□□□□ -1.31
THBS3-201ENST00000368378 F8W735 103 aaPredicted RBP6.86□□□□□ -1.31
THBS3-201ENST00000368378 TRBV12-3P01733 135 aa6.86□□□□□ -1.31
THBS3-201ENST00000368378 SAA4P35542 130 aa6.86□□□□□ -1.31
THBS3-201ENST00000368378 FAM74A4Q5TZK3 123 aa6.86□□□□□ -1.31
THBS3-201ENST00000368378 C14orf178Q8N769 122 aaPredicted RBP6.86□□□□□ -1.31
THBS3-201ENST00000368378 ZNF502Q8TBZ5 544 aa6.86□□□□□ -1.31
THBS3-201ENST00000368378 VKORC1Q9BQB6 163 aa6.86□□□□□ -1.31
THBS3-201ENST00000368378 BPESC1Q9GZL8 116 aa6.86□□□□□ -1.31
THBS3-201ENST00000368378 MRPL35Q9NZE8 188 aaKnown RBP6.86□□□□□ -1.31
THBS3-201ENST00000368378 IGHV7-81A0A0B4J1V7 117 aa6.85□□□□□ -1.31
THBS3-201ENST00000368378 LY6LH3BQJ8 138 aa6.85□□□□□ -1.31
THBS3-201ENST00000368378 TMEM78Q5T7P6 136 aa6.85□□□□□ -1.31
THBS3-201ENST00000368378 PTH2Q96A98 100 aa6.85□□□□□ -1.31
THBS3-201ENST00000368378 VPREB3Q9UKI3 123 aa6.85□□□□□ -1.31
THBS3-201ENST00000368378 PRRC2AP48634 2157 aaKnown RBP6.85□□□□□ -1.31
THBS3-201ENST00000368378 A6NDN8 102 aa6.85□□□□□ -1.31
THBS3-201ENST00000368378 FABP5P3A8MUU1 101 aa6.85□□□□□ -1.31
THBS3-201ENST00000368378 F5H697 171 aa6.85□□□□□ -1.31
THBS3-201ENST00000368378 CRXO43186 299 aaPredicted RBP6.85□□□□□ -1.31
THBS3-201ENST00000368378 CD5LO43866 347 aa6.85□□□□□ -1.31
THBS3-201ENST00000368378 AGPAT4-IT1Q9H0P7 198 aa6.85□□□□□ -1.31
THBS3-201ENST00000368378 IGLV11-55A0A075B6I3 123 aa6.85□□□□□ -1.31
THBS3-201ENST00000368378 IGHV3-64A0A075B6Q5 118 aa6.85□□□□□ -1.31
THBS3-201ENST00000368378 TEX48A0A1B0GUV7 120 aa6.85□□□□□ -1.31
THBS3-201ENST00000368378 HSD52Q0P140 79 aa6.85□□□□□ -1.31
THBS3-201ENST00000368378 MAPK1IP1LQ8NDC0 245 aa6.85□□□□□ -1.31
THBS3-201ENST00000368378 CYSLTR1Q9Y271 337 aa6.85□□□□□ -1.31
THBS3-201ENST00000368378 NIPBLQ6KC79 2804 aaeCLIP6.84□□□□□ -1.31
THBS3-201ENST00000368378 SMIM17P0DL12 118 aa6.84□□□□□ -1.31
THBS3-201ENST00000368378 ZNF843Q8N446 348 aa6.84□□□□□ -1.31
THBS3-201ENST00000368378 RPL39LQ96EH5 51 aaKnown RBP6.84□□□□□ -1.31
THBS3-201ENST00000368378 IGKV3D-20A0A0C4DH25 116 aa6.84□□□□□ -1.31
THBS3-201ENST00000368378 H7C2G1 150 aa6.84□□□□□ -1.31
THBS3-201ENST00000368378 OVOL3O00110 214 aa6.84□□□□□ -1.31
THBS3-201ENST00000368378 RNASE4P34096 147 aaKnown RBP6.84□□□□□ -1.31
THBS3-201ENST00000368378 HIST1H4GQ99525 98 aa6.84□□□□□ -1.31
THBS3-201ENST00000368378 GAGE12HA6NDE8 117 aa6.83□□□□□ -1.32
THBS3-201ENST00000368378 MRPS12O15235 138 aaKnown RBP6.83□□□□□ -1.32
THBS3-201ENST00000368378 HOXB4P17483 251 aaPredicted RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 292.6 ms