RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 GOLT1BQ9Y3E0 138 aa13.5□□□□□ -0.25
LMNA-204ENST00000368298 V9GYV3 84 aa13.5□□□□□ -0.25
LMNA-204ENST00000368298 INSP01308 110 aa13.49□□□□□ -0.25
LMNA-204ENST00000368298 CRISP2P16562 243 aa13.49□□□□□ -0.25
LMNA-204ENST00000368298 LEPP41159 167 aa13.49□□□□□ -0.25
LMNA-204ENST00000368298 SMIM12Q96EX1 92 aa13.49□□□□□ -0.25
LMNA-204ENST00000368298 BIN3Q9NQY0 253 aa13.49□□□□□ -0.25
LMNA-204ENST00000368298 TRAV12-2A0A075B6T6 113 aa13.48□□□□□ -0.25
LMNA-204ENST00000368298 IBA57Q5T440 356 aaKnown RBP13.48□□□□□ -0.25
LMNA-204ENST00000368298 TMEM78Q5T7P6 136 aa13.48□□□□□ -0.25
LMNA-204ENST00000368298 TMEM256Q8N2U0 113 aa13.48□□□□□ -0.25
LMNA-204ENST00000368298 BTF3L4Q96K17 158 aa13.48□□□□□ -0.25
LMNA-204ENST00000368298 IGHV4-28A0A0C4DH34 117 aa13.48□□□□□ -0.25
LMNA-204ENST00000368298 TRBV6-1A0A0K0K1D8 114 aa13.48□□□□□ -0.25
LMNA-204ENST00000368298 SERTM2A0A1B0GWG4 89 aa13.48□□□□□ -0.25
LMNA-204ENST00000368298 KLLNB2CW77 178 aa13.48□□□□□ -0.25
LMNA-204ENST00000368298 LTAP01374 205 aa13.48□□□□□ -0.25
LMNA-204ENST00000368298 TRGC2P03986 189 aa13.48□□□□□ -0.25
LMNA-204ENST00000368298 TYMSP04818 313 aa13.48□□□□□ -0.25
LMNA-204ENST00000368298 RBMY1A1P0DJD3 496 aaKnown RBP13.48□□□□□ -0.25
LMNA-204ENST00000368298 RBMY1CP0DJD4 496 aa13.48□□□□□ -0.25
LMNA-204ENST00000368298 RBMY1FQ15415 496 aaKnown RBP13.48□□□□□ -0.25
LMNA-204ENST00000368298 Q86TA4 180 aa13.48□□□□□ -0.25
LMNA-204ENST00000368298 LENEPQ9Y5L5 61 aa13.48□□□□□ -0.25
LMNA-204ENST00000368298 K7EQM0 130 aa13.47□□□□□ -0.25
LMNA-204ENST00000368298 ZNF138P52744 262 aa13.47□□□□□ -0.25
LMNA-204ENST00000368298 KIR3DS1Q14943 382 aa13.47□□□□□ -0.25
LMNA-204ENST00000368298 FAM231DQ6ZW35 169 aa13.47□□□□□ -0.25
LMNA-204ENST00000368298 TMEM75Q8N9X5 138 aa13.47□□□□□ -0.25
LMNA-204ENST00000368298 MUC7Q8TAX7 377 aa13.47□□□□□ -0.25
LMNA-204ENST00000368298 TRAV9-1A0A075B6T8 112 aa13.46□□□□□ -0.25
LMNA-204ENST00000368298 TRAV8-1A0A0A6YYK1 113 aa13.46□□□□□ -0.25
LMNA-204ENST00000368298 ZNF705GA8MUZ8 300 aaPredicted RBP13.46□□□□□ -0.25
LMNA-204ENST00000368298 GATCO43716 136 aaKnown RBP13.46□□□□□ -0.25
LMNA-204ENST00000368298 GFI1BQ5VTD9 330 aa13.46□□□□□ -0.25
LMNA-204ENST00000368298 PRNTQ86SH4 94 aa13.46□□□□□ -0.25
LMNA-204ENST00000368298 IL17DQ8TAD2 202 aa13.46□□□□□ -0.25
LMNA-204ENST00000368298 MLST8Q9BVC4 326 aa13.46□□□□□ -0.25
LMNA-204ENST00000368298 IGHV3OR16-12A0A075B7B8 117 aa13.45□□□□□ -0.26
LMNA-204ENST00000368298 IGLV2-11P01706 119 aa13.45□□□□□ -0.26
LMNA-204ENST00000368298 S100A6P06703 90 aa13.45□□□□□ -0.26
LMNA-204ENST00000368298 PRR27Q6MZM9 219 aa13.45□□□□□ -0.26
LMNA-204ENST00000368298 ZFAND2AQ8N6M9 145 aa13.45□□□□□ -0.26
LMNA-204ENST00000368298 TMEM189A5PLL7 270 aa13.44□□□□□ -0.26
LMNA-204ENST00000368298 NUDT10Q8NFP7 164 aa13.44□□□□□ -0.26
LMNA-204ENST00000368298 NUDT11Q96G61 164 aa13.44□□□□□ -0.26
LMNA-204ENST00000368298 TMEM208Q9BTX3 173 aa13.44□□□□□ -0.26
LMNA-204ENST00000368298 PSG8Q9UQ74 426 aa13.44□□□□□ -0.26
LMNA-204ENST00000368298 C3orf84H3BNL1 204 aa13.43□□□□□ -0.26
LMNA-204ENST00000368298 RRN3P1Q2M238 152 aa13.43□□□□□ -0.26
LMNA-204ENST00000368298 TMEM183AQ8IXX5 376 aa13.43□□□□□ -0.26
LMNA-204ENST00000368298 FRZBQ92765 325 aa13.43□□□□□ -0.26
LMNA-204ENST00000368298 C7orf71A4D174 169 aa13.42□□□□□ -0.26
LMNA-204ENST00000368298 PHOX2AO14813 284 aa13.42□□□□□ -0.26
LMNA-204ENST00000368298 DEFB4AO15263 64 aa13.42□□□□□ -0.26
LMNA-204ENST00000368298 ZNF324O75467 553 aaPredicted RBP13.42□□□□□ -0.26
LMNA-204ENST00000368298 GPX1P07203 203 aa13.42□□□□□ -0.26
LMNA-204ENST00000368298 SNRPEP62304 92 aaKnown RBP13.42□□□□□ -0.26
LMNA-204ENST00000368298 Q8TAT8 98 aa13.42□□□□□ -0.26
LMNA-204ENST00000368298 LINC01587Q99440 93 aa13.42□□□□□ -0.26
LMNA-204ENST00000368298 FBLL1A6NHQ2 334 aaKnown RBP13.42□□□□□ -0.26
LMNA-204ENST00000368298 TRGC1P0CF51 173 aa13.42□□□□□ -0.26
LMNA-204ENST00000368298 ZFP30Q9Y2G7 519 aa13.42□□□□□ -0.26
LMNA-204ENST00000368298 SMIM27A0A1W2PRY6 76 aa13.41□□□□□ -0.26
LMNA-204ENST00000368298 C5orf52A6NGY3 159 aa13.41□□□□□ -0.26
LMNA-204ENST00000368298 HIST1H2BKO60814 126 aa13.41□□□□□ -0.26
LMNA-204ENST00000368298 HIST1H2BJP06899 126 aa13.41□□□□□ -0.26
LMNA-204ENST00000368298 HIST1H2BOP23527 126 aa13.41□□□□□ -0.26
LMNA-204ENST00000368298 HIST1H2BBP33778 126 aa13.41□□□□□ -0.26
LMNA-204ENST00000368298 TCL1AP56279 114 aa13.41□□□□□ -0.26
LMNA-204ENST00000368298 HIST1H2BDP58876 126 aa13.41□□□□□ -0.26
LMNA-204ENST00000368298 HIST1H2BCP62807 126 aa13.41□□□□□ -0.26
LMNA-204ENST00000368298 HIST2H2BEQ16778 126 aa13.41□□□□□ -0.26
LMNA-204ENST00000368298 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.41□□□□□ -0.26
LMNA-204ENST00000368298 HIST1H2BHQ93079 126 aa13.41□□□□□ -0.26
LMNA-204ENST00000368298 HIST1H2BNQ99877 126 aa13.41□□□□□ -0.26
LMNA-204ENST00000368298 HIST1H2BMQ99879 126 aa13.41□□□□□ -0.26
LMNA-204ENST00000368298 LINC00467Q9BRT7 94 aa13.41□□□□□ -0.26
LMNA-204ENST00000368298 TRAV12-3A0A0B4J271 114 aa13.4□□□□□ -0.26
LMNA-204ENST00000368298 J3KRW8 73 aa13.4□□□□□ -0.26
LMNA-204ENST00000368298 PRR9Q5T870 116 aa13.4□□□□□ -0.26
LMNA-204ENST00000368298 C11orf45Q8TAV5 145 aa13.4□□□□□ -0.26
LMNA-204ENST00000368298 DNAH7Q8WXX0 4024 aa13.39□□□□□ -0.27
LMNA-204ENST00000368298 C19orf71A6NCJ1 209 aa13.39□□□□□ -0.27
LMNA-204ENST00000368298 RNASE4P34096 147 aaKnown RBP13.39□□□□□ -0.27
LMNA-204ENST00000368298 NDUFA6P56556 154 aa13.39□□□□□ -0.27
LMNA-204ENST00000368298 Q6AWC8 147 aa13.39□□□□□ -0.27
LMNA-204ENST00000368298 ZNF493Q6ZR52 646 aa13.39□□□□□ -0.27
LMNA-204ENST00000368298 DAZAP1Q96EP5 407 aaKnown RBP13.39□□□□□ -0.27
LMNA-204ENST00000368298 RPP21Q9H633 154 aaKnown RBP13.39□□□□□ -0.27
LMNA-204ENST00000368298 P01737 135 aa13.38□□□□□ -0.27
LMNA-204ENST00000368298 PRM2P04554 102 aa13.38□□□□□ -0.27
LMNA-204ENST00000368298 AZU1P20160 251 aa13.38□□□□□ -0.27
LMNA-204ENST00000368298 RPL19P84098 196 aaKnown RBP13.38□□□□□ -0.27
LMNA-204ENST00000368298 ZC2HC1AQ96GY0 325 aa13.38□□□□□ -0.27
LMNA-204ENST00000368298 TRAPPC1Q9Y5R8 145 aa13.38□□□□□ -0.27
LMNA-204ENST00000368298 PLAC8L1A1L4L8 177 aa13.37□□□□□ -0.27
LMNA-204ENST00000368298 FABP9Q0Z7S8 132 aa13.37□□□□□ -0.27
LMNA-204ENST00000368298 CASC10Q5T4H9 136 aa13.37□□□□□ -0.27
LMNA-204ENST00000368298 RNASE8Q8TDE3 154 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms