RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 TMEM141Q96I45 108 aa4.26□□□□□ -1.73
CDC42BPA-204ENST00000366767 JPT2Q9H910 190 aa4.26□□□□□ -1.73
CDC42BPA-204ENST00000366767 NBL1P41271 181 aa4.26□□□□□ -1.73
CDC42BPA-204ENST00000366767 HAMPP81172 84 aa4.26□□□□□ -1.73
CDC42BPA-204ENST00000366767 CLEC19AQ6UXS0 136 aa4.26□□□□□ -1.73
CDC42BPA-204ENST00000366767 WFDC2Q14508 124 aa4.26□□□□□ -1.73
CDC42BPA-204ENST00000366767 A0A0B4J2C4 111 aa4.26□□□□□ -1.73
CDC42BPA-204ENST00000366767 SP5Q6BEB4 398 aaPredicted RBP4.26□□□□□ -1.73
CDC42BPA-204ENST00000366767 A0A1B0GX51 115 aa4.25□□□□□ -1.73
CDC42BPA-204ENST00000366767 RS1O15537 224 aa4.25□□□□□ -1.73
CDC42BPA-204ENST00000366767 UBE2E1P51965 193 aa4.25□□□□□ -1.73
CDC42BPA-204ENST00000366767 FAM167A-AS1Q96KT0 104 aa4.25□□□□□ -1.73
CDC42BPA-204ENST00000366767 LINC00479Q96M42 142 aa4.25□□□□□ -1.73
CDC42BPA-204ENST00000366767 TRAV41A0A0B4J266 112 aa4.25□□□□□ -1.73
CDC42BPA-204ENST00000366767 NPBQ8NG41 125 aa4.25□□□□□ -1.73
CDC42BPA-204ENST00000366767 LINC01587Q99440 93 aa4.25□□□□□ -1.73
CDC42BPA-204ENST00000366767 ZNRD1Q9P1U0 126 aa4.25□□□□□ -1.73
CDC42BPA-204ENST00000366767 GVINP1Q7Z2Y8 2422 aa4.25□□□□□ -1.73
CDC42BPA-204ENST00000366767 TRGV11A0A075B6L2 103 aa4.25□□□□□ -1.73
CDC42BPA-204ENST00000366767 LYNX1G3V0Z9 82 aa4.25□□□□□ -1.73
CDC42BPA-204ENST00000366767 LYNX1P0DP58 116 aa4.25□□□□□ -1.73
CDC42BPA-204ENST00000366767 IGFBPL1Q8WX77 278 aa4.25□□□□□ -1.73
CDC42BPA-204ENST00000366767 CRYGCP07315 174 aa4.25□□□□□ -1.73
CDC42BPA-204ENST00000366767 RBX1P62877 108 aa4.25□□□□□ -1.73
CDC42BPA-204ENST00000366767 TDRG1Q3Y452 100 aa4.25□□□□□ -1.73
CDC42BPA-204ENST00000366767 FAM104BQ5XKR9 115 aa4.25□□□□□ -1.73
CDC42BPA-204ENST00000366767 ZNF491Q8N8L2 437 aa4.25□□□□□ -1.73
CDC42BPA-204ENST00000366767 CTSZQ9UBR2 303 aa4.25□□□□□ -1.73
CDC42BPA-204ENST00000366767 IGHV3OR16-8A0A075B7F1 116 aa4.25□□□□□ -1.73
CDC42BPA-204ENST00000366767 TMEM213A2RRL7 107 aa4.25□□□□□ -1.73
CDC42BPA-204ENST00000366767 DSCR9P59020 149 aa4.25□□□□□ -1.73
CDC42BPA-204ENST00000366767 PAX8Q06710 450 aa4.25□□□□□ -1.73
CDC42BPA-204ENST00000366767 SVIPQ8NHG7 77 aa4.25□□□□□ -1.73
CDC42BPA-204ENST00000366767 SHISA9B4DS77 424 aa4.25□□□□□ -1.73
CDC42BPA-204ENST00000366767 IGHG2P01859 326 aa4.25□□□□□ -1.73
CDC42BPA-204ENST00000366767 ZNF876PQ49A33 203 aa4.25□□□□□ -1.73
CDC42BPA-204ENST00000366767 TRAV12-1A0A0B4J245 112 aa4.24□□□□□ -1.73
CDC42BPA-204ENST00000366767 FBXL19-AS1Q494R0 122 aa4.24□□□□□ -1.73
CDC42BPA-204ENST00000366767 SPRNQ5BIV9 151 aa4.24□□□□□ -1.73
CDC42BPA-204ENST00000366767 USMG5Q96IX5 58 aa4.24□□□□□ -1.73
CDC42BPA-204ENST00000366767 DKK2Q9UBU2 259 aa4.24□□□□□ -1.73
CDC42BPA-204ENST00000366767 IL17RELQ6ZVW7 336 aa4.24□□□□□ -1.73
CDC42BPA-204ENST00000366767 TEN1Q86WV5 123 aa4.24□□□□□ -1.73
CDC42BPA-204ENST00000366767 LY6G5BQ8NDX9 201 aa4.24□□□□□ -1.73
CDC42BPA-204ENST00000366767 PEMTQ9UBM1 199 aa4.24□□□□□ -1.73
CDC42BPA-204ENST00000366767 PKIGQ9Y2B9 76 aa4.24□□□□□ -1.73
CDC42BPA-204ENST00000366767 IGLV2-23P01705 113 aa4.24□□□□□ -1.73
CDC42BPA-204ENST00000366767 CFC1BP0CG36 223 aa4.24□□□□□ -1.73
CDC42BPA-204ENST00000366767 CFC1P0CG37 223 aa4.24□□□□□ -1.73
CDC42BPA-204ENST00000366767 SIGLEC15Q6ZMC9 328 aa4.24□□□□□ -1.73
CDC42BPA-204ENST00000366767 CHCHD5Q9BSY4 110 aa4.24□□□□□ -1.73
CDC42BPA-204ENST00000366767 MRPL51Q4U2R6 128 aaKnown RBP4.24□□□□□ -1.73
CDC42BPA-204ENST00000366767 ZC2HC1AQ96GY0 325 aa4.24□□□□□ -1.73
CDC42BPA-204ENST00000366767 NDUFS7O75251 213 aa4.24□□□□□ -1.73
CDC42BPA-204ENST00000366767 IGLV1-47P01700 117 aa4.24□□□□□ -1.73
CDC42BPA-204ENST00000366767 SRSF2Q01130 221 aaKnown RBP4.24□□□□□ -1.73
CDC42BPA-204ENST00000366767 FAM168AQ92567 244 aa4.24□□□□□ -1.73
CDC42BPA-204ENST00000366767 MRPL53Q96EL3 112 aaKnown RBP4.24□□□□□ -1.73
CDC42BPA-204ENST00000366767 NBASA2RRP1 2371 aa4.24□□□□□ -1.73
CDC42BPA-204ENST00000366767 RBAKDNA6NC62 111 aa4.24□□□□□ -1.73
CDC42BPA-204ENST00000366767 I3L2K1 104 aa4.24□□□□□ -1.73
CDC42BPA-204ENST00000366767 PATE2Q6UY27 113 aa4.24□□□□□ -1.73
CDC42BPA-204ENST00000366767 PRIMA1Q86XR5 153 aa4.24□□□□□ -1.73
CDC42BPA-204ENST00000366767 SPATA25Q9BR10 227 aa4.24□□□□□ -1.73
CDC42BPA-204ENST00000366767 MRPL35Q9NZE8 188 aaKnown RBP4.24□□□□□ -1.73
CDC42BPA-204ENST00000366767 TP53TG1Q9Y2A0 90 aa4.24□□□□□ -1.73
CDC42BPA-204ENST00000366767 NUPR1O60356 82 aa4.23□□□□□ -1.73
CDC42BPA-204ENST00000366767 DUSP14O95147 198 aaKnown RBP4.23□□□□□ -1.73
CDC42BPA-204ENST00000366767 PRB3Q04118 309 aaPredicted RBP4.23□□□□□ -1.73
CDC42BPA-204ENST00000366767 MSMPQ1L6U9 139 aa4.23□□□□□ -1.73
CDC42BPA-204ENST00000366767 CLUHP3Q96NS8 147 aa4.23□□□□□ -1.73
CDC42BPA-204ENST00000366767 CCL19Q99731 98 aa4.23□□□□□ -1.73
CDC42BPA-204ENST00000366767 TINCRA0A1B0GVN0 87 aa4.23□□□□□ -1.73
CDC42BPA-204ENST00000366767 NDUFV3P56181 108 aaKnown RBP4.23□□□□□ -1.73
CDC42BPA-204ENST00000366767 PCP2Q8IVA1 136 aa4.23□□□□□ -1.73
CDC42BPA-204ENST00000366767 CDK2AP2O75956 126 aa4.23□□□□□ -1.73
CDC42BPA-204ENST00000366767 A0A087WX48 190 aa4.23□□□□□ -1.73
CDC42BPA-204ENST00000366767 WI2-2373I1.2A0A1W2PRP0 233 aa4.23□□□□□ -1.73
CDC42BPA-204ENST00000366767 GP9P14770 177 aa4.23□□□□□ -1.73
CDC42BPA-204ENST00000366767 DIAPH2-AS1Q14236 149 aa4.23□□□□□ -1.73
CDC42BPA-204ENST00000366767 ATP5G1P05496 136 aa4.23□□□□□ -1.73
CDC42BPA-204ENST00000366767 C14orf178Q8N769 122 aaPredicted RBP4.23□□□□□ -1.73
CDC42BPA-204ENST00000366767 PRR25Q96S07 402 aa4.23□□□□□ -1.73
CDC42BPA-204ENST00000366767 TPSG1Q9NRR2 321 aa4.23□□□□□ -1.73
CDC42BPA-204ENST00000366767 C15orf32Q32M92 178 aa4.23□□□□□ -1.73
CDC42BPA-204ENST00000366767 SUMO4Q6EEV6 95 aa4.23□□□□□ -1.73
CDC42BPA-204ENST00000366767 Q6ZUT4 128 aa4.23□□□□□ -1.73
CDC42BPA-204ENST00000366767 ZNF747Q9BV97 191 aa4.23□□□□□ -1.73
CDC42BPA-204ENST00000366767 LINC00527Q9UJ94 153 aa4.23□□□□□ -1.73
CDC42BPA-204ENST00000366767 H3BUA1 57 aa4.22□□□□□ -1.73
CDC42BPA-204ENST00000366767 BAALC-AS2P0C853 105 aa4.22□□□□□ -1.73
CDC42BPA-204ENST00000366767 C2orf66Q6UXQ4 117 aa4.22□□□□□ -1.73
CDC42BPA-204ENST00000366767 C8orf49Q96NF6 230 aa4.22□□□□□ -1.73
CDC42BPA-204ENST00000366767 DSCR8Q96T75 97 aa4.22□□□□□ -1.73
CDC42BPA-204ENST00000366767 A0A0U1RQV1 116 aa4.22□□□□□ -1.73
CDC42BPA-204ENST00000366767 LENEPQ9Y5L5 61 aa4.22□□□□□ -1.73
CDC42BPA-204ENST00000366767 IGKV1OR2-108A0A075B7D4 117 aa4.22□□□□□ -1.73
CDC42BPA-204ENST00000366767 INSP01308 110 aa4.22□□□□□ -1.73
CDC42BPA-204ENST00000366767 ERCC8Q13216 396 aa4.22□□□□□ -1.73
CDC42BPA-204ENST00000366767 Q8TAT8 98 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms