RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 WISP1O95388 367 aa9.54□□□□□ -0.88
CDC42BPA-203ENST00000366766 HERVK_113P63121 156 aa9.54□□□□□ -0.88
CDC42BPA-203ENST00000366766 C8orf49Q96NF6 230 aa9.54□□□□□ -0.88
CDC42BPA-203ENST00000366766 C22orf46C9J442 243 aa9.54□□□□□ -0.88
CDC42BPA-203ENST00000366766 SMKR1H3BMG3 65 aa9.54□□□□□ -0.88
CDC42BPA-203ENST00000366766 GNLYP22749 145 aa9.54□□□□□ -0.88
CDC42BPA-203ENST00000366766 LINC00527Q9UJ94 153 aa9.54□□□□□ -0.88
CDC42BPA-203ENST00000366766 TMEM213A2RRL7 107 aa9.54□□□□□ -0.88
CDC42BPA-203ENST00000366766 EREGO14944 169 aa9.54□□□□□ -0.88
CDC42BPA-203ENST00000366766 Q6ZVH6 145 aa9.53□□□□□ -0.88
CDC42BPA-203ENST00000366766 IGKV3D-20A0A0C4DH25 116 aa9.53□□□□□ -0.88
CDC42BPA-203ENST00000366766 TRBV6-1A0A0K0K1D8 114 aa9.53□□□□□ -0.88
CDC42BPA-203ENST00000366766 SYNJ2BPP57105 145 aa9.53□□□□□ -0.88
CDC42BPA-203ENST00000366766 STPG4Q8N801 248 aa9.53□□□□□ -0.88
CDC42BPA-203ENST00000366766 A0A087WWL8 130 aa9.53□□□□□ -0.88
CDC42BPA-203ENST00000366766 PRO1854Q9UHT4 67 aa9.53□□□□□ -0.88
CDC42BPA-203ENST00000366766 ADAMTS20P59510 1910 aa9.53□□□□□ -0.88
CDC42BPA-203ENST00000366766 UBE2WQ96B02 151 aa9.53□□□□□ -0.88
CDC42BPA-203ENST00000366766 TRAV13-2A0A0B4J235 113 aa9.53□□□□□ -0.88
CDC42BPA-203ENST00000366766 UTF1Q5T230 341 aa9.53□□□□□ -0.88
CDC42BPA-203ENST00000366766 RIPPLY3P57055 190 aa9.52□□□□□ -0.88
CDC42BPA-203ENST00000366766 CITED1Q99966 193 aa9.52□□□□□ -0.88
CDC42BPA-203ENST00000366766 PRSS47A8MTI9 375 aa9.52□□□□□ -0.89
CDC42BPA-203ENST00000366766 HTN3P15516 51 aa9.52□□□□□ -0.89
CDC42BPA-203ENST00000366766 IGLL1P15814 213 aa9.52□□□□□ -0.89
CDC42BPA-203ENST00000366766 IGHV3-64A0A075B6Q5 118 aa9.52□□□□□ -0.89
CDC42BPA-203ENST00000366766 A0A1W2PPM0 123 aa9.52□□□□□ -0.89
CDC42BPA-203ENST00000366766 CEND1Q8N111 149 aa9.52□□□□□ -0.89
CDC42BPA-203ENST00000366766 MCRIP2Q9BUT9 160 aaKnown RBP9.51□□□□□ -0.89
CDC42BPA-203ENST00000366766 APOC4P55056 127 aa9.51□□□□□ -0.89
CDC42BPA-203ENST00000366766 LHFPL4Q7Z7J7 247 aa9.51□□□□□ -0.89
CDC42BPA-203ENST00000366766 TMEM243Q9BU79 118 aa9.51□□□□□ -0.89
CDC42BPA-203ENST00000366766 GATD1Q8NB37 220 aa9.51□□□□□ -0.89
CDC42BPA-203ENST00000366766 K7EN84 100 aa9.51□□□□□ -0.89
CDC42BPA-203ENST00000366766 GP9P14770 177 aa9.51□□□□□ -0.89
CDC42BPA-203ENST00000366766 BVES-AS1Q5T3Y7 98 aa9.51□□□□□ -0.89
CDC42BPA-203ENST00000366766 DEFB131AP59861 70 aa9.5□□□□□ -0.89
CDC42BPA-203ENST00000366766 TCTEX1D4Q5JR98 221 aa9.5□□□□□ -0.89
CDC42BPA-203ENST00000366766 F8WEM9 126 aa9.5□□□□□ -0.89
CDC42BPA-203ENST00000366766 SPINK8P0C7L1 97 aa9.5□□□□□ -0.89
CDC42BPA-203ENST00000366766 LAMTOR3Q9UHA4 124 aa9.5□□□□□ -0.89
CDC42BPA-203ENST00000366766 PKD1L2Q7Z442 2459 aa9.5□□□□□ -0.89
CDC42BPA-203ENST00000366766 K7EP13 123 aa9.5□□□□□ -0.89
CDC42BPA-203ENST00000366766 TET2Q6N021 2002 aaPredicted RBP9.5□□□□□ -0.89
CDC42BPA-203ENST00000366766 C9JAW5 83 aa9.5□□□□□ -0.89
CDC42BPA-203ENST00000366766 PKIGQ9Y2B9 76 aa9.5□□□□□ -0.89
CDC42BPA-203ENST00000366766 HOXB4P17483 251 aaPredicted RBP9.5□□□□□ -0.89
CDC42BPA-203ENST00000366766 ZNF747Q9BV97 191 aa9.5□□□□□ -0.89
CDC42BPA-203ENST00000366766 LINC00574Q9H8X3 128 aa9.5□□□□□ -0.89
CDC42BPA-203ENST00000366766 FSTL3O95633 263 aa9.49□□□□□ -0.89
CDC42BPA-203ENST00000366766 IFITM1P13164 125 aa9.49□□□□□ -0.89
CDC42BPA-203ENST00000366766 H3BQ85 93 aa9.49□□□□□ -0.89
CDC42BPA-203ENST00000366766 VPREB3Q9UKI3 123 aa9.49□□□□□ -0.89
CDC42BPA-203ENST00000366766 MRPL35Q9NZE8 188 aaKnown RBP9.49□□□□□ -0.89
CDC42BPA-203ENST00000366766 J3QQQ9 107 aa9.49□□□□□ -0.89
CDC42BPA-203ENST00000366766 TRAV13-1A0A0B4J241 112 aa9.49□□□□□ -0.89
CDC42BPA-203ENST00000366766 IGHG4P01861 327 aa9.49□□□□□ -0.89
CDC42BPA-203ENST00000366766 MED14OSP0DP75 135 aa9.49□□□□□ -0.89
CDC42BPA-203ENST00000366766 IGHV3-73A0A0B4J1V6 119 aa9.48□□□□□ -0.89
CDC42BPA-203ENST00000366766 NDUFS7O75251 213 aa9.48□□□□□ -0.89
CDC42BPA-203ENST00000366766 TMEM89A2RUT3 159 aa9.48□□□□□ -0.89
CDC42BPA-203ENST00000366766 NSUN5P1Q3KNT7 163 aa9.48□□□□□ -0.89
CDC42BPA-203ENST00000366766 NDUFA12Q9UI09 145 aa9.48□□□□□ -0.89
CDC42BPA-203ENST00000366766 SOCS3O14543 225 aa9.48□□□□□ -0.89
CDC42BPA-203ENST00000366766 RPL32P62910 135 aaKnown RBP9.48□□□□□ -0.89
CDC42BPA-203ENST00000366766 PRRC2AP48634 2157 aaKnown RBP9.48□□□□□ -0.89
CDC42BPA-203ENST00000366766 IGLV11-55A0A075B6I3 123 aa9.48□□□□□ -0.89
CDC42BPA-203ENST00000366766 SPINK13Q1W4C9 94 aa9.48□□□□□ -0.89
CDC42BPA-203ENST00000366766 Q5PR19 223 aa9.48□□□□□ -0.89
CDC42BPA-203ENST00000366766 A0A1B0GUS0 222 aa9.48□□□□□ -0.89
CDC42BPA-203ENST00000366766 TPSG1Q9NRR2 321 aa9.48□□□□□ -0.89
CDC42BPA-203ENST00000366766 ZNRD1Q9P1U0 126 aa9.48□□□□□ -0.89
CDC42BPA-203ENST00000366766 G3V318 75 aa9.48□□□□□ -0.89
CDC42BPA-203ENST00000366766 SH2D6Q7Z4S9 175 aa9.48□□□□□ -0.89
CDC42BPA-203ENST00000366766 HIGD1BQ9P298 99 aa9.48□□□□□ -0.89
CDC42BPA-203ENST00000366766 LY6HO94772 140 aa9.47□□□□□ -0.89
CDC42BPA-203ENST00000366766 EP400Q96L91 3159 aa9.47□□□□□ -0.89
CDC42BPA-203ENST00000366766 NPYP01303 97 aa9.47□□□□□ -0.89
CDC42BPA-203ENST00000366766 VWC2LB2RUY7 222 aa9.47□□□□□ -0.89
CDC42BPA-203ENST00000366766 IGF2BP2-AS1Q96M15 143 aa9.47□□□□□ -0.89
CDC42BPA-203ENST00000366766 I3L2K1 104 aa9.47□□□□□ -0.89
CDC42BPA-203ENST00000366766 AZU1P20160 251 aa9.47□□□□□ -0.89
CDC42BPA-203ENST00000366766 CTRLP40313 264 aa9.47□□□□□ -0.89
CDC42BPA-203ENST00000366766 GTSF1LQ9H1H1 148 aa9.47□□□□□ -0.89
CDC42BPA-203ENST00000366766 TEX48A0A1B0GUV7 120 aa9.47□□□□□ -0.89
CDC42BPA-203ENST00000366766 IGKV1-17P01599 117 aa9.47□□□□□ -0.89
CDC42BPA-203ENST00000366766 HERV-K104P63124 156 aa9.47□□□□□ -0.89
CDC42BPA-203ENST00000366766 FBXL19-AS1Q494R0 122 aa9.47□□□□□ -0.89
CDC42BPA-203ENST00000366766 ANXA2RQ3ZCQ2 193 aa9.46□□□□□ -0.89
CDC42BPA-203ENST00000366766 RMI2Q96E14 147 aa9.46□□□□□ -0.89
CDC42BPA-203ENST00000366766 K7EIM0 57 aa9.46□□□□□ -0.9
CDC42BPA-203ENST00000366766 ACYP1P07311 99 aa9.46□□□□□ -0.9
CDC42BPA-203ENST00000366766 FXYD7P58549 80 aa9.46□□□□□ -0.9
CDC42BPA-203ENST00000366766 DEFB125Q8N687 156 aa9.46□□□□□ -0.9
CDC42BPA-203ENST00000366766 TRAV8-3A0A0A6YYJ7 113 aa9.46□□□□□ -0.9
CDC42BPA-203ENST00000366766 FAM167A-AS1Q96KT0 104 aa9.45□□□□□ -0.9
CDC42BPA-203ENST00000366766 IGFL4Q6B9Z1 124 aa9.45□□□□□ -0.9
CDC42BPA-203ENST00000366766 CRYGCP07315 174 aa9.45□□□□□ -0.9
CDC42BPA-203ENST00000366766 P0C879 139 aa9.45□□□□□ -0.9
CDC42BPA-203ENST00000366766 TRAV12-1A0A0B4J245 112 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms