RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 KLF2Q9Y5W3 355 aaPredicted RBP13.18□□□□□ -0.3
NID1-202ENST00000366595 LINC00643Q86TS7 51 aa13.18□□□□□ -0.3
NID1-202ENST00000366595 DKK4Q9UBT3 224 aa13.18□□□□□ -0.3
NID1-202ENST00000366595 RPL18AQ02543 176 aaKnown RBP13.18□□□□□ -0.3
NID1-202ENST00000366595 ZMAT4Q9H898 229 aa13.18□□□□□ -0.3
NID1-202ENST00000366595 MPDZO75970 2070 aa13.17□□□□□ -0.3
NID1-202ENST00000366595 C5orf38Q86SI9 138 aa13.17□□□□□ -0.3
NID1-202ENST00000366595 RNF223E7ERA6 249 aa13.17□□□□□ -0.3
NID1-202ENST00000366595 NOP10Q9NPE3 64 aaKnown RBP13.17□□□□□ -0.3
NID1-202ENST00000366595 FHL1Q13642 323 aa13.17□□□□□ -0.3
NID1-202ENST00000366595 MRPL23Q16540 153 aaKnown RBP13.17□□□□□ -0.3
NID1-202ENST00000366595 TMEM256-PLSCR3K7ERE1 68 aa13.17□□□□□ -0.3
NID1-202ENST00000366595 COL24A1Q17RW2 1714 aa13.17□□□□□ -0.3
NID1-202ENST00000366595 GNRH2O43555 120 aa13.16□□□□□ -0.3
NID1-202ENST00000366595 LY6HO94772 140 aa13.16□□□□□ -0.3
NID1-202ENST00000366595 FOXE3Q13461 319 aa13.16□□□□□ -0.3
NID1-202ENST00000366595 A0A096LPF7 62 aa13.16□□□□□ -0.3
NID1-202ENST00000366595 ARFGEF3Q5TH69 2177 aa13.16□□□□□ -0.3
NID1-202ENST00000366595 TMEM61Q8N0U2 210 aa13.16□□□□□ -0.3
NID1-202ENST00000366595 KAAG1Q9UBP8 84 aa13.16□□□□□ -0.3
NID1-202ENST00000366595 K7EQD1 137 aa13.15□□□□□ -0.3
NID1-202ENST00000366595 LGALS9O00182 355 aa13.15□□□□□ -0.3
NID1-202ENST00000366595 ANKRD39Q53RE8 183 aa13.15□□□□□ -0.3
NID1-202ENST00000366595 C16orf74Q96GX8 76 aa13.15□□□□□ -0.3
NID1-202ENST00000366595 PATJQ8NI35 1801 aa13.15□□□□□ -0.3
NID1-202ENST00000366595 COL4A1P02462 1669 aa13.15□□□□□ -0.3
NID1-202ENST00000366595 WFDC2Q14508 124 aa13.15□□□□□ -0.3
NID1-202ENST00000366595 A0A0J9YXV3 536 aa13.14□□□□□ -0.31
NID1-202ENST00000366595 NDUFA1O15239 70 aa13.14□□□□□ -0.31
NID1-202ENST00000366595 IGHV4-4A0A075B6R2 117 aa13.14□□□□□ -0.31
NID1-202ENST00000366595 Q6ZR03 302 aa13.14□□□□□ -0.31
NID1-202ENST00000366595 TIMM17AQ99595 171 aa13.14□□□□□ -0.31
NID1-202ENST00000366595 E9PLD3 99 aa13.14□□□□□ -0.31
NID1-202ENST00000366595 TRBV12-3P01733 135 aa13.14□□□□□ -0.31
NID1-202ENST00000366595 TPSG1Q9NRR2 321 aa13.14□□□□□ -0.31
NID1-202ENST00000366595 IGLV3-9A0A075B6K5 115 aa13.13□□□□□ -0.31
NID1-202ENST00000366595 G3V4G9 280 aa13.13□□□□□ -0.31
NID1-202ENST00000366595 PRB1P04280 392 aa13.13□□□□□ -0.31
NID1-202ENST00000366595 WDR86Q86TI4 376 aa13.13□□□□□ -0.31
NID1-202ENST00000366595 PIFOQ8TCI5 191 aa13.13□□□□□ -0.31
NID1-202ENST00000366595 DIRC1Q969H9 104 aa13.13□□□□□ -0.31
NID1-202ENST00000366595 HEATR1Q9H583 2144 aaKnown RBP13.13□□□□□ -0.31
NID1-202ENST00000366595 K7ERS5 55 aa13.13□□□□□ -0.31
NID1-202ENST00000366595 FANCMQ8IYD8 2048 aa13.13□□□□□ -0.31
NID1-202ENST00000366595 Q6ZQT7 251 aa13.13□□□□□ -0.31
NID1-202ENST00000366595 ADAMTSL1Q8N6G6 1762 aa13.13□□□□□ -0.31
NID1-202ENST00000366595 LECT2O14960 151 aa13.12□□□□□ -0.31
NID1-202ENST00000366595 C9orf47Q6ZRZ4 202 aa13.12□□□□□ -0.31
NID1-202ENST00000366595 Q8N1Y9 231 aa13.12□□□□□ -0.31
NID1-202ENST00000366595 C11orf86A6NJI1 115 aa13.12□□□□□ -0.31
NID1-202ENST00000366595 FXYD2P54710 66 aa13.12□□□□□ -0.31
NID1-202ENST00000366595 PSME4Q14997 1843 aa13.12□□□□□ -0.31
NID1-202ENST00000366595 PRB2P02812 416 aaPredicted RBP13.12□□□□□ -0.31
NID1-202ENST00000366595 RNASE8Q8TDE3 154 aaKnown RBP13.12□□□□□ -0.31
NID1-202ENST00000366595 MED14OSP0DP75 135 aa13.12□□□□□ -0.31
NID1-202ENST00000366595 Q6ZUT4 128 aa13.11□□□□□ -0.31
NID1-202ENST00000366595 FAM240AA0A1B0GVK7 77 aa13.11□□□□□ -0.31
NID1-202ENST00000366595 POLEQ07864 2286 aa13.11□□□□□ -0.31
NID1-202ENST00000366595 A0A0J9YY99 117 aa13.1□□□□□ -0.31
NID1-202ENST00000366595 FGF23Q9GZV9 251 aaPredicted RBP13.1□□□□□ -0.31
NID1-202ENST00000366595 C4orf48Q5BLP8 95 aa13.1□□□□□ -0.31
NID1-202ENST00000366595 UBE2AP49459 152 aa13.1□□□□□ -0.31
NID1-202ENST00000366595 RBBP6Q7Z6E9 1792 aaKnown RBP13.1□□□□□ -0.31
NID1-202ENST00000366595 ZDBF2Q9HCK1 2354 aa13.09□□□□□ -0.31
NID1-202ENST00000366595 DIDO1Q9BTC0 2240 aaKnown RBP13.09□□□□□ -0.31
NID1-202ENST00000366595 TRAV26-1A0A087WT03 109 aa13.09□□□□□ -0.31
NID1-202ENST00000366595 IGLV1-44P01699 117 aa13.09□□□□□ -0.31
NID1-202ENST00000366595 TOMM6Q96B49 74 aa13.09□□□□□ -0.31
NID1-202ENST00000366595 SCN10AQ9Y5Y9 1956 aa13.09□□□□□ -0.31
NID1-202ENST00000366595 UQCRQO14949 82 aa13.09□□□□□ -0.31
NID1-202ENST00000366595 RPL39LQ96EH5 51 aaKnown RBP13.09□□□□□ -0.31
NID1-202ENST00000366595 Q9HAA7 133 aa13.09□□□□□ -0.31
NID1-202ENST00000366595 GATA1P15976 413 aaPredicted RBP13.09□□□□□ -0.31
NID1-202ENST00000366595 CCL18P55774 89 aa13.09□□□□□ -0.31
NID1-202ENST00000366595 SP5Q6BEB4 398 aaPredicted RBP13.09□□□□□ -0.31
NID1-202ENST00000366595 C17orf77Q96MU5 243 aa13.09□□□□□ -0.31
NID1-202ENST00000366595 GYPEP15421 78 aa13.08□□□□□ -0.31
NID1-202ENST00000366595 ATP5EP2Q5VTU8 51 aa13.08□□□□□ -0.31
NID1-202ENST00000366595 SPTSSBQ8NFR3 76 aa13.08□□□□□ -0.31
NID1-202ENST00000366595 CHD5Q8TDI0 1954 aa13.08□□□□□ -0.32
NID1-202ENST00000366595 SPART-AS1P0CW21 52 aa13.08□□□□□ -0.32
NID1-202ENST00000366595 V9GYY9 64 aa13.08□□□□□ -0.32
NID1-202ENST00000366595 MYO7BQ6PIF6 2116 aa13.08□□□□□ -0.32
NID1-202ENST00000366595 POLR2AP24928 1970 aaKnown RBP13.08□□□□□ -0.32
NID1-202ENST00000366595 PARP14Q460N5 1801 aa13.08□□□□□ -0.32
NID1-202ENST00000366595 SDK2Q58EX2 2172 aa13.08□□□□□ -0.32
NID1-202ENST00000366595 GP9P14770 177 aa13.07□□□□□ -0.32
NID1-202ENST00000366595 LOC285556D6RIA3 1793 aa13.06□□□□□ -0.32
NID1-202ENST00000366595 TM2D2Q9BX73 214 aa13.06□□□□□ -0.32
NID1-202ENST00000366595 IGFL3Q6UXB1 125 aa13.06□□□□□ -0.32
NID1-202ENST00000366595 Q96MF0 132 aa13.06□□□□□ -0.32
NID1-202ENST00000366595 MYOFQ9NZM1 2061 aa13.06□□□□□ -0.32
NID1-202ENST00000366595 UNQ6494/PRO21346Q6UXR6 183 aa13.06□□□□□ -0.32
NID1-202ENST00000366595 VPREB3Q9UKI3 123 aa13.06□□□□□ -0.32
NID1-202ENST00000366595 FAM236DA0A1B0GTK5 79 aa13.05□□□□□ -0.32
NID1-202ENST00000366595 FAM236CP0DP71 79 aa13.05□□□□□ -0.32
NID1-202ENST00000366595 CDPF1Q6NVV7 123 aa13.05□□□□□ -0.32
NID1-202ENST00000366595 Q8NFD4 153 aa13.05□□□□□ -0.32
NID1-202ENST00000366595 C16orf54Q6UWD8 224 aa13.05□□□□□ -0.32
NID1-202ENST00000366595 RALGAPA2Q2PPJ7 1873 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms