RNA–Protein interactions for RNA: ENST00000363574.1

RNU6-1339P-201, Transcript of RNA, U6 small nuclear 1339, pseudogene, humanhuman

BASIC

Gene RNU6-1339P, Length 91 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1339P-201ENST00000363574 RHOHQ15669 191 aa1.3□□□□□ -2.2
RNU6-1339P-201ENST00000363574 LSM2Q9Y333 95 aaKnown RBP1.3□□□□□ -2.2
RNU6-1339P-201ENST00000363574 DISP2A7MBM2 1401 aa1.3□□□□□ -2.2
RNU6-1339P-201ENST00000363574 KIDINS220Q9ULH0 1771 aa1.29□□□□□ -2.2
RNU6-1339P-201ENST00000363574 FAM236AA0A1B0GUQ0 79 aa1.29□□□□□ -2.2
RNU6-1339P-201ENST00000363574 FAM236BA0A1B0GV22 79 aa1.29□□□□□ -2.2
RNU6-1339P-201ENST00000363574 TMEM30CPA0ZSE6 113 aa1.29□□□□□ -2.2
RNU6-1339P-201ENST00000363574 IGKCP01834 107 aa1.29□□□□□ -2.2
RNU6-1339P-201ENST00000363574 LINC00694P0DN24 101 aa1.29□□□□□ -2.2
RNU6-1339P-201ENST00000363574 COX4I1P13073 169 aa1.29□□□□□ -2.2
RNU6-1339P-201ENST00000363574 IL7P13232 177 aa1.29□□□□□ -2.2
RNU6-1339P-201ENST00000363574 NCS1P62166 190 aa1.29□□□□□ -2.2
RNU6-1339P-201ENST00000363574 LYPD5Q6UWN5 251 aa1.29□□□□□ -2.2
RNU6-1339P-201ENST00000363574 TSTD1Q8NFU3 115 aa1.29□□□□□ -2.2
RNU6-1339P-201ENST00000363574 MRPL36Q9P0J6 103 aaKnown RBP1.29□□□□□ -2.2
RNU6-1339P-201ENST00000363574 TRPM7Q96QT4 1865 aa1.29□□□□□ -2.2
RNU6-1339P-201ENST00000363574 RBP4P02753 201 aa1.28□□□□□ -2.2
RNU6-1339P-201ENST00000363574 LINC00575Q6W349 94 aa1.28□□□□□ -2.2
RNU6-1339P-201ENST00000363574 Q8N6K4 173 aa1.28□□□□□ -2.2
RNU6-1339P-201ENST00000363574 PRG4Q92954 1404 aaPredicted RBP1.28□□□□□ -2.2
RNU6-1339P-201ENST00000363574 FANCMQ8IYD8 2048 aa1.28□□□□□ -2.2
RNU6-1339P-201ENST00000363574 ROS1P08922 2347 aa1.28□□□□□ -2.2
RNU6-1339P-201ENST00000363574 HELZP42694 1942 aaKnown RBP1.27□□□□□ -2.21
RNU6-1339P-201ENST00000363574 J3QR89 54 aa1.27□□□□□ -2.21
RNU6-1339P-201ENST00000363574 TPST1O60507 370 aa1.27□□□□□ -2.21
RNU6-1339P-201ENST00000363574 YPEL1O60688 119 aa1.27□□□□□ -2.21
RNU6-1339P-201ENST00000363574 HMGN1P05114 100 aa1.27□□□□□ -2.21
RNU6-1339P-201ENST00000363574 SLC25A26Q70HW3 274 aa1.27□□□□□ -2.21
RNU6-1339P-201ENST00000363574 CTAGE3PQ8IX95 158 aa1.27□□□□□ -2.21
RNU6-1339P-201ENST00000363574 ATP6V0E2Q8NHE4 81 aa1.27□□□□□ -2.21
RNU6-1339P-201ENST00000363574 TCEAL4Q96EI5 215 aa1.27□□□□□ -2.21
RNU6-1339P-201ENST00000363574 SNRNP200O75643 2136 aaKnown RBP1.27□□□□□ -2.21
RNU6-1339P-201ENST00000363574 CDK5RAP2Q96SN8 1893 aa1.26□□□□□ -2.21
RNU6-1339P-201ENST00000363574 TRBV20-1A0A075B6N2 111 aa1.26□□□□□ -2.21
RNU6-1339P-201ENST00000363574 A0A0G2JMM0 328 aa1.26□□□□□ -2.21
RNU6-1339P-201ENST00000363574 ATP11AUNQ6ZP68 121 aa1.26□□□□□ -2.21
RNU6-1339P-201ENST00000363574 SNX29P2Q8IUI4 249 aa1.26□□□□□ -2.21
RNU6-1339P-201ENST00000363574 NOP16Q9Y3C1 178 aaKnown RBP1.26□□□□□ -2.21
RNU6-1339P-201ENST00000363574 LRP5O75197 1615 aa1.26□□□□□ -2.21
RNU6-1339P-201ENST00000363574 UHRF1BP1LA0JNW5 1464 aa1.25□□□□□ -2.21
RNU6-1339P-201ENST00000363574 SOGA1O94964 1423 aa1.25□□□□□ -2.21
RNU6-1339P-201ENST00000363574 EML5Q05BV3 1969 aa1.25□□□□□ -2.21
RNU6-1339P-201ENST00000363574 CPDO75976 1380 aa1.25□□□□□ -2.21
RNU6-1339P-201ENST00000363574 M0R2P5 195 aa1.25□□□□□ -2.21
RNU6-1339P-201ENST00000363574 NCR2O95944 276 aa1.25□□□□□ -2.21
RNU6-1339P-201ENST00000363574 IQCJQ1A5X6 159 aa1.25□□□□□ -2.21
RNU6-1339P-201ENST00000363574 Q6ZQY7 126 aa1.25□□□□□ -2.21
RNU6-1339P-201ENST00000363574 DMAC1Q96GE9 116 aa1.25□□□□□ -2.21
RNU6-1339P-201ENST00000363574 PFDN5Q99471 154 aa1.25□□□□□ -2.21
RNU6-1339P-201ENST00000363574 FAM107BQ9H098 131 aa1.25□□□□□ -2.21
RNU6-1339P-201ENST00000363574 TAS2R8Q9NYW2 309 aa1.25□□□□□ -2.21
RNU6-1339P-201ENST00000363574 MRPL35Q9NZE8 188 aaKnown RBP1.25□□□□□ -2.21
RNU6-1339P-201ENST00000363574 CITO14578 2027 aa1.25□□□□□ -2.21
RNU6-1339P-201ENST00000363574 TRIOBPQ9H2D6 2365 aa1.25□□□□□ -2.21
RNU6-1339P-201ENST00000363574 VIRMAQ69YN4 1812 aaKnown RBP1.24□□□□□ -2.21
RNU6-1339P-201ENST00000363574 ZGRF1Q86YA3 2104 aa1.24□□□□□ -2.21
RNU6-1339P-201ENST00000363574 K7ERU9 68 aa1.24□□□□□ -2.21
RNU6-1339P-201ENST00000363574 M0R129 80 aa1.24□□□□□ -2.21
RNU6-1339P-201ENST00000363574 POLR2JP52435 117 aaKnown RBP1.24□□□□□ -2.21
RNU6-1339P-201ENST00000363574 CCDC58Q4VC31 144 aa1.24□□□□□ -2.21
RNU6-1339P-201ENST00000363574 UNQ5815/PRO19632Q6UWF5 114 aa1.24□□□□□ -2.21
RNU6-1339P-201ENST00000363574 CCL19Q99731 98 aa1.24□□□□□ -2.21
RNU6-1339P-201ENST00000363574 TPT1P8Q9HAU6 139 aa1.24□□□□□ -2.21
RNU6-1339P-201ENST00000363574 CCDC171Q6TFL3 1326 aa1.23□□□□□ -2.21
RNU6-1339P-201ENST00000363574 TRAV17A0A0B4J275 112 aa1.23□□□□□ -2.21
RNU6-1339P-201ENST00000363574 NPFFO15130 113 aa1.23□□□□□ -2.21
RNU6-1339P-201ENST00000363574 PRB4P10163 310 aaPredicted RBP1.23□□□□□ -2.21
RNU6-1339P-201ENST00000363574 RPS25P62851 125 aaKnown RBP1.23□□□□□ -2.21
RNU6-1339P-201ENST00000363574 XAF1Q6GPH4 301 aa1.23□□□□□ -2.21
RNU6-1339P-201ENST00000363574 DEFB132Q7Z7B7 95 aa1.23□□□□□ -2.21
RNU6-1339P-201ENST00000363574 ATG5Q9H1Y0 275 aa1.23□□□□□ -2.21
RNU6-1339P-201ENST00000363574 ERCC6Q03468 1493 aa1.23□□□□□ -2.21
RNU6-1339P-201ENST00000363574 LAMA4Q16363 1823 aa1.22□□□□□ -2.21
RNU6-1339P-201ENST00000363574 BICRAQ9NZM4 1560 aa1.22□□□□□ -2.21
RNU6-1339P-201ENST00000363574 TRAV2A0A0B4J234 112 aa1.22□□□□□ -2.21
RNU6-1339P-201ENST00000363574 TRBV30A0A0K0K1B3 111 aa1.22□□□□□ -2.21
RNU6-1339P-201ENST00000363574 NBDYA0A0U1RRE5 68 aa1.22□□□□□ -2.21
RNU6-1339P-201ENST00000363574 CXorf51AA0A1B0GTR3 108 aa1.22□□□□□ -2.21
RNU6-1339P-201ENST00000363574 LOC101927531A0A1B0GV80 90 aa1.22□□□□□ -2.21
RNU6-1339P-201ENST00000363574 HIGD1CA8MV81 97 aa1.22□□□□□ -2.21
RNU6-1339P-201ENST00000363574 NDUFA2O43678 99 aa1.22□□□□□ -2.21
RNU6-1339P-201ENST00000363574 Q86TA4 180 aa1.22□□□□□ -2.21
RNU6-1339P-201ENST00000363574 DYNLRB2Q8TF09 96 aa1.22□□□□□ -2.21
RNU6-1339P-201ENST00000363574 PPDPFLQ8WWR9 84 aa1.22□□□□□ -2.21
RNU6-1339P-201ENST00000363574 PAIP2BQ9ULR5 123 aaKnown RBP1.22□□□□□ -2.21
RNU6-1339P-201ENST00000363574 NINQ8N4C6 2090 aa1.21□□□□□ -2.22
RNU6-1339P-201ENST00000363574 J3QLW9 94 aa1.21□□□□□ -2.22
RNU6-1339P-201ENST00000363574 KRTAP5-8O75690 187 aa1.21□□□□□ -2.22
RNU6-1339P-201ENST00000363574 FXYD3Q14802 87 aa1.21□□□□□ -2.22
RNU6-1339P-201ENST00000363574 SAR1AQ9NR31 198 aa1.21□□□□□ -2.22
RNU6-1339P-201ENST00000363574 ERG28Q9UKR5 140 aa1.21□□□□□ -2.22
RNU6-1339P-201ENST00000363574 KMT2BQ9UMN6 2715 aaPredicted RBP1.21□□□□□ -2.22
RNU6-1339P-201ENST00000363574 CNTRLQ7Z7A1 2325 aa1.21□□□□□ -2.22
RNU6-1339P-201ENST00000363574 ZCCHC6Q5VYS8 1495 aaKnown RBP1.2□□□□□ -2.22
RNU6-1339P-201ENST00000363574 TRBV10-1A0A0K0K1A3 114 aa1.2□□□□□ -2.22
RNU6-1339P-201ENST00000363574 A0A1W2PPM0 123 aa1.2□□□□□ -2.22
RNU6-1339P-201ENST00000363574 ZNF670-ZNF695F2Z2N8 137 aa1.2□□□□□ -2.22
RNU6-1339P-201ENST00000363574 MIC13Q5XKP0 118 aa1.2□□□□□ -2.22
RNU6-1339P-201ENST00000363574 CASZ1Q86V15 1759 aa1.2□□□□□ -2.22
RNU6-1339P-201ENST00000363574 ASCC3Q8N3C0 2202 aaKnown RBP1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms