RNA–Protein interactions for RNA: ENST00000360439.8

SIN3A-201, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 5,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-201ENST00000360439 PRUNE2Q8WUY3 3088 aa7.9□□□□□ -1.14
SIN3A-201ENST00000360439 IFI27P40305 119 aaPredicted RBP7.9□□□□□ -1.14
SIN3A-201ENST00000360439 LEPP41159 167 aa7.9□□□□□ -1.14
SIN3A-201ENST00000360439 DAD1P61803 113 aa7.9□□□□□ -1.14
SIN3A-201ENST00000360439 CR1LQ2VPA4 569 aa7.9□□□□□ -1.14
SIN3A-201ENST00000360439 TMEM200BQ69YZ2 307 aa7.9□□□□□ -1.14
SIN3A-201ENST00000360439 SLC25A2Q9BXI2 301 aa7.9□□□□□ -1.14
SIN3A-201ENST00000360439 SHANK1Q9Y566 2161 aa7.9□□□□□ -1.15
SIN3A-201ENST00000360439 NAV3Q8IVL0 2385 aa7.9□□□□□ -1.15
SIN3A-201ENST00000360439 SMIM27A0A1W2PRY6 76 aa7.9□□□□□ -1.15
SIN3A-201ENST00000360439 RNASE1P07998 156 aaKnown RBP7.9□□□□□ -1.15
SIN3A-201ENST00000360439 CNTFRP26992 372 aa7.89□□□□□ -1.15
SIN3A-201ENST00000360439 DIAPH2-AS1Q14236 149 aa7.89□□□□□ -1.15
SIN3A-201ENST00000360439 PRSS22Q9GZN4 317 aa7.89□□□□□ -1.15
SIN3A-201ENST00000360439 TP53TG3Q9ULZ0 132 aa7.89□□□□□ -1.15
SIN3A-201ENST00000360439 GATA4P43694 442 aa7.89□□□□□ -1.15
SIN3A-201ENST00000360439 SLC25A48Q6ZT89 311 aaKnown RBP7.89□□□□□ -1.15
SIN3A-201ENST00000360439 TMEM167AQ8TBQ9 72 aa7.89□□□□□ -1.15
SIN3A-201ENST00000360439 C16orf92Q96LL3 132 aa7.89□□□□□ -1.15
SIN3A-201ENST00000360439 TRAV3A0A0B4J244 114 aa7.89□□□□□ -1.15
SIN3A-201ENST00000360439 IGHV3-35A0A0C4DH35 117 aa7.89□□□□□ -1.15
SIN3A-201ENST00000360439 MORN5Q5VZ52 161 aa7.89□□□□□ -1.15
SIN3A-201ENST00000360439 Q6ZR03 302 aa7.89□□□□□ -1.15
SIN3A-201ENST00000360439 M0R2P5 195 aa7.89□□□□□ -1.15
SIN3A-201ENST00000360439 ATOX1O00244 68 aa7.89□□□□□ -1.15
SIN3A-201ENST00000360439 LOXL1Q08397 574 aaPredicted RBP7.89□□□□□ -1.15
SIN3A-201ENST00000360439 ASPHD1Q5U4P2 390 aa7.89□□□□□ -1.15
SIN3A-201ENST00000360439 WIPF2Q8TF74 440 aaPredicted RBP7.89□□□□□ -1.15
SIN3A-201ENST00000360439 MYMXA0A1B0GTQ4 84 aa7.88□□□□□ -1.15
SIN3A-201ENST00000360439 H3BUX3 64 aa7.88□□□□□ -1.15
SIN3A-201ENST00000360439 C19orf84I3L1E1 186 aa7.88□□□□□ -1.15
SIN3A-201ENST00000360439 TRGV3P03979 118 aa7.88□□□□□ -1.15
SIN3A-201ENST00000360439 MYOD1P15172 320 aa7.88□□□□□ -1.15
SIN3A-201ENST00000360439 ZNF493Q6ZR52 646 aa7.88□□□□□ -1.15
SIN3A-201ENST00000360439 ZNF295-AS1Q8N0V1 137 aa7.88□□□□□ -1.15
SIN3A-201ENST00000360439 TRGV9Q99603 122 aa7.88□□□□□ -1.15
SIN3A-201ENST00000360439 TRAV21A0A0B4J279 112 aa7.88□□□□□ -1.15
SIN3A-201ENST00000360439 IGHG4P01861 327 aa7.88□□□□□ -1.15
SIN3A-201ENST00000360439 TMEM213A2RRL7 107 aa7.88□□□□□ -1.15
SIN3A-201ENST00000360439 TIMM23O14925 209 aa7.88□□□□□ -1.15
SIN3A-201ENST00000360439 NPYP01303 97 aa7.88□□□□□ -1.15
SIN3A-201ENST00000360439 PRR20EP86478 221 aa7.88□□□□□ -1.15
SIN3A-201ENST00000360439 PRR20CP86479 221 aa7.88□□□□□ -1.15
SIN3A-201ENST00000360439 PRR20DP86480 221 aa7.88□□□□□ -1.15
SIN3A-201ENST00000360439 PRR20BP86481 221 aa7.88□□□□□ -1.15
SIN3A-201ENST00000360439 PRR20AP86496 221 aa7.88□□□□□ -1.15
SIN3A-201ENST00000360439 Q9H3A6 140 aa7.88□□□□□ -1.15
SIN3A-201ENST00000360439 ZNF492Q9P255 531 aa7.88□□□□□ -1.15
SIN3A-201ENST00000360439 IGHV1-8P0DP01 117 aa7.87□□□□□ -1.15
SIN3A-201ENST00000360439 HLA-DRB4P13762 266 aa7.87□□□□□ -1.15
SIN3A-201ENST00000360439 ZNF329Q86UD4 541 aa7.87□□□□□ -1.15
SIN3A-201ENST00000360439 GAFA1Q96PS6 74 aa7.87□□□□□ -1.15
SIN3A-201ENST00000360439 HLA-DRB4X5D2U9 266 aa7.87□□□□□ -1.15
SIN3A-201ENST00000360439 A0A1B0GUT8 65 aa7.87□□□□□ -1.15
SIN3A-201ENST00000360439 RBMY1BA6NDE4 496 aaKnown RBP7.87□□□□□ -1.15
SIN3A-201ENST00000360439 RBMY1EA6NEQ0 496 aaKnown RBP7.87□□□□□ -1.15
SIN3A-201ENST00000360439 RBMY1DP0C7P1 496 aaKnown RBP7.87□□□□□ -1.15
SIN3A-201ENST00000360439 RBMY1A1P0DJD3 496 aaKnown RBP7.87□□□□□ -1.15
SIN3A-201ENST00000360439 RBMY1CP0DJD4 496 aa7.87□□□□□ -1.15
SIN3A-201ENST00000360439 HOXA4Q00056 320 aaPredicted RBP7.87□□□□□ -1.15
SIN3A-201ENST00000360439 RBMY1FQ15415 496 aaKnown RBP7.87□□□□□ -1.15
SIN3A-201ENST00000360439 PLA2G2AP14555 144 aa7.87□□□□□ -1.15
SIN3A-201ENST00000360439 KLF5Q13887 457 aaPredicted RBP7.87□□□□□ -1.15
SIN3A-201ENST00000360439 FLNBO75369 2602 aaKnown RBP7.87□□□□□ -1.15
SIN3A-201ENST00000360439 DSCAML1Q8TD84 2053 aa7.87□□□□□ -1.15
SIN3A-201ENST00000360439 TRBV25-1A0A075B6N4 114 aa7.86□□□□□ -1.15
SIN3A-201ENST00000360439 IGHV3-48P01763 117 aa7.86□□□□□ -1.15
SIN3A-201ENST00000360439 PVRIGQ6DKI7 326 aa7.86□□□□□ -1.15
SIN3A-201ENST00000360439 SPANXDQ9BXN6 97 aa7.86□□□□□ -1.15
SIN3A-201ENST00000360439 JMJD1CQ15652 2540 aa7.86□□□□□ -1.15
SIN3A-201ENST00000360439 IGHV3-11P01762 117 aa7.86□□□□□ -1.15
SIN3A-201ENST00000360439 FGF6P10767 208 aa7.86□□□□□ -1.15
SIN3A-201ENST00000360439 ORMDL2Q53FV1 153 aa7.86□□□□□ -1.15
SIN3A-201ENST00000360439 IGLV3-9A0A075B6K5 115 aa7.86□□□□□ -1.15
SIN3A-201ENST00000360439 DAZAP2Q15038 168 aaPredicted RBP7.86□□□□□ -1.15
SIN3A-201ENST00000360439 NSUN5P1Q3KNT7 163 aa7.86□□□□□ -1.15
SIN3A-201ENST00000360439 ZNF833PQ6ZTB9 187 aa7.86□□□□□ -1.15
SIN3A-201ENST00000360439 STHQ8IWL8 128 aa7.86□□□□□ -1.15
SIN3A-201ENST00000360439 C11orf53Q8IXP5 236 aa7.86□□□□□ -1.15
SIN3A-201ENST00000360439 S4R3C0 116 aa7.86□□□□□ -1.15
SIN3A-201ENST00000360439 EIF4EBP1Q13541 118 aaPredicted RBP7.86□□□□□ -1.15
SIN3A-201ENST00000360439 ORMDL3Q8N138 153 aa7.86□□□□□ -1.15
SIN3A-201ENST00000360439 LAMA2P24043 3122 aaKnown RBP7.86□□□□□ -1.15
SIN3A-201ENST00000360439 RUSC1-AS1Q66K80 236 aa7.85□□□□□ -1.15
SIN3A-201ENST00000360439 BPTFQ12830 3046 aa7.85□□□□□ -1.15
SIN3A-201ENST00000360439 C2orf70A6NJV1 201 aa7.85□□□□□ -1.15
SIN3A-201ENST00000360439 HTN1P15515 57 aa7.85□□□□□ -1.15
SIN3A-201ENST00000360439 C4orf48Q5BLP8 95 aa7.85□□□□□ -1.15
SIN3A-201ENST00000360439 SPTSSBQ8NFR3 76 aa7.85□□□□□ -1.15
SIN3A-201ENST00000360439 RNF5Q99942 180 aa7.85□□□□□ -1.15
SIN3A-201ENST00000360439 CDIP1Q9H305 208 aa7.85□□□□□ -1.15
SIN3A-201ENST00000360439 ATG2AQ2TAZ0 1938 aa7.85□□□□□ -1.15
SIN3A-201ENST00000360439 NBR2O15453 112 aa7.85□□□□□ -1.15
SIN3A-201ENST00000360439 C17orf58Q2M2W7 97 aa7.85□□□□□ -1.15
SIN3A-201ENST00000360439 LINC01559Q495D7 138 aa7.85□□□□□ -1.15
SIN3A-201ENST00000360439 DKK2Q9UBU2 259 aa7.85□□□□□ -1.15
SIN3A-201ENST00000360439 IGHV4-30-2A0A087WSY4 118 aa7.85□□□□□ -1.15
SIN3A-201ENST00000360439 E9PLD3 99 aa7.85□□□□□ -1.15
SIN3A-201ENST00000360439 LTAP01374 205 aa7.85□□□□□ -1.15
SIN3A-201ENST00000360439 IGHV3-23P01764 117 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms